RNA–Protein interactions for RNA: ENST00000421069.5

VPS8-202, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-202ENST00000421069 AEBP2Q6ZN18 517 aaPredicted RBP21.23■□□□□ 0.99
VPS8-202ENST00000421069 CHIC1Q5VXU3 224 aa21.14■□□□□ 0.97
VPS8-202ENST00000421069 PHF23Q9BUL5 403 aaPredicted RBP18.6■□□□□ 0.57
VPS8-202ENST00000421069 SENP3Q9H4L4 574 aaPredicted RBP18.01■□□□□ 0.47
VPS8-202ENST00000421069 PLPPR3Q6T4P5 718 aa17.34■□□□□ 0.37
VPS8-202ENST00000421069 FOXD1Q16676 465 aa16.63■□□□□ 0.25
VPS8-202ENST00000421069 ADRA2BP18089 450 aa16.28■□□□□ 0.2
VPS8-202ENST00000421069 PPP6R1Q9UPN7 881 aa16.28■□□□□ 0.2
VPS8-202ENST00000421069 PIAS4Q8N2W9 510 aaPredicted RBP15.76■□□□□ 0.11
VPS8-202ENST00000421069 KCNA4P22459 653 aa15.34■□□□□ 0.05
VPS8-202ENST00000421069 PPP4R3CPQ6ZMV5 832 aa15.3■□□□□ 0.04
VPS8-202ENST00000421069 MSH5O43196 834 aa15.24■□□□□ 0.03
VPS8-202ENST00000421069 NCBP3Q53F19 620 aaKnown RBP15.05■□□□□ -0
VPS8-202ENST00000421069 SCAF1Q9H7N4 1312 aaKnown RBP14.96□□□□□ -0.01
VPS8-202ENST00000421069 CNKSR2Q8WXI2 1034 aa14.82□□□□□ -0.04
VPS8-202ENST00000421069 NPM3O75607 178 aaKnown RBP14.78□□□□□ -0.04
VPS8-202ENST00000421069 SLC4A1APQ9BWU0 796 aaKnown RBP14.69□□□□□ -0.06
VPS8-202ENST00000421069 MAPK8IP2Q13387 824 aaPredicted RBP14.65□□□□□ -0.06
VPS8-202ENST00000421069 EHMT2Q96KQ7 1210 aa14.63□□□□□ -0.07
VPS8-202ENST00000421069 RNF216Q9NWF9 866 aaPredicted RBP14.45□□□□□ -0.1
VPS8-202ENST00000421069 DMRT2Q9Y5R5 561 aa14.43□□□□□ -0.1
VPS8-202ENST00000421069 DNAJC5BQ9UF47 199 aa14.41□□□□□ -0.1
VPS8-202ENST00000421069 CSRNP3Q8WYN3 585 aa14.35□□□□□ -0.11
VPS8-202ENST00000421069 HOXD11P31277 338 aaPredicted RBP14.29□□□□□ -0.12
VPS8-202ENST00000421069 ZBTB22O15209 634 aa14.1□□□□□ -0.15
VPS8-202ENST00000421069 FOXD4L1Q9NU39 408 aa14.04□□□□□ -0.16
VPS8-202ENST00000421069 SLC4A2P04920 1241 aa13.87□□□□□ -0.19
VPS8-202ENST00000421069 DCAF8L1A6NGE4 600 aa13.71□□□□□ -0.21
VPS8-202ENST00000421069 MYCNP04198 464 aaPredicted RBP13.67□□□□□ -0.22
VPS8-202ENST00000421069 POTEDQ86YR6 584 aa13.58□□□□□ -0.24
VPS8-202ENST00000421069 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.58□□□□□ -0.24
VPS8-202ENST00000421069 ATXN8OSP0DMR3 200 aa13.57□□□□□ -0.24
VPS8-202ENST00000421069 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.42□□□□□ -0.26
VPS8-202ENST00000421069 HNRNPUL2Q1KMD3 747 aaKnown RBP13.42□□□□□ -0.26
VPS8-202ENST00000421069 U3KPZ7 1027 aaPredicted RBP13.41□□□□□ -0.26
VPS8-202ENST00000421069 SAMD1Q6SPF0 538 aaPredicted RBP13.37□□□□□ -0.27
VPS8-202ENST00000421069 ATF5Q9Y2D1 282 aaPredicted RBP13.22□□□□□ -0.29
VPS8-202ENST00000421069 APLP2Q06481 763 aa13.19□□□□□ -0.3
VPS8-202ENST00000421069 RNF39Q9H2S5 420 aa13.07□□□□□ -0.32
VPS8-202ENST00000421069 ZNF219Q9P2Y4 722 aaPredicted RBP13.02□□□□□ -0.33
VPS8-202ENST00000421069 C1QBPQ07021 282 aaKnown RBP12.97□□□□□ -0.33
VPS8-202ENST00000421069 FKBP8Q14318 412 aa12.93□□□□□ -0.34
VPS8-202ENST00000421069 SPINK5Q9NQ38 1064 aaPredicted RBP12.89□□□□□ -0.35
VPS8-202ENST00000421069 TRHP20396 242 aaPredicted RBP12.85□□□□□ -0.35
VPS8-202ENST00000421069 CAPN15O75808 1086 aa12.83□□□□□ -0.36
VPS8-202ENST00000421069 POLA2Q14181 598 aa12.74□□□□□ -0.37
VPS8-202ENST00000421069 FBLN2P98095 1184 aa12.7□□□□□ -0.38
VPS8-202ENST00000421069 MKRN4PQ13434 485 aaPredicted RBP12.69□□□□□ -0.38
VPS8-202ENST00000421069 ZBTB12Q9Y330 459 aaPredicted RBP12.63□□□□□ -0.39
VPS8-202ENST00000421069 SPDYE4A6NLX3 237 aa12.6□□□□□ -0.39
VPS8-202ENST00000421069 ABCB7O75027 752 aa12.59□□□□□ -0.39
VPS8-202ENST00000421069 DSG3P32926 999 aa12.56□□□□□ -0.4
VPS8-202ENST00000421069 PROM2Q8N271 834 aa12.49□□□□□ -0.41
VPS8-202ENST00000421069 AMER1Q5JTC6 1135 aaPredicted RBP12.48□□□□□ -0.41
VPS8-202ENST00000421069 CACNB1Q02641 598 aaPredicted RBP12.44□□□□□ -0.42
VPS8-202ENST00000421069 FBXO3Q9UK99 471 aa12.44□□□□□ -0.42
VPS8-202ENST00000421069 RTN4Q9NQC3 1192 aaKnown RBP12.39□□□□□ -0.43
VPS8-202ENST00000421069 SPDYE2BA6NHP3 402 aa12.3□□□□□ -0.44
VPS8-202ENST00000421069 SPDYE6P0CI01 402 aa12.3□□□□□ -0.44
VPS8-202ENST00000421069 SPDYE2Q495Y8 402 aa12.3□□□□□ -0.44
VPS8-202ENST00000421069 OSCARQ8IYS5 282 aa12.28□□□□□ -0.44
VPS8-202ENST00000421069 ZNF692Q9BU19 519 aaPredicted RBP12.27□□□□□ -0.45
VPS8-202ENST00000421069 SSUH2Q9Y2M2 353 aa12.24□□□□□ -0.45
VPS8-202ENST00000421069 VASPP50552 380 aaPredicted RBP12.22□□□□□ -0.45
VPS8-202ENST00000421069 PABPN1Q86U42 306 aaKnown RBP eCLIP12.12□□□□□ -0.47
VPS8-202ENST00000421069 STAG3Q9UJ98 1225 aa12.11□□□□□ -0.47
VPS8-202ENST00000421069 IFNLR1Q8IU57 520 aaPredicted RBP12.06□□□□□ -0.48
VPS8-202ENST00000421069 RBM42Q9BTD8 480 aaKnown RBP11.99□□□□□ -0.49
VPS8-202ENST00000421069 PLCD3Q8N3E9 789 aa11.92□□□□□ -0.5
VPS8-202ENST00000421069 AKT1S1Q96B36 256 aa11.92□□□□□ -0.5
VPS8-202ENST00000421069 KLHL34Q8N239 644 aa11.91□□□□□ -0.5
VPS8-202ENST00000421069 SPOCK2Q92563 424 aa11.9□□□□□ -0.5
VPS8-202ENST00000421069 MIER1Q8N108 512 aa11.89□□□□□ -0.51
VPS8-202ENST00000421069 SPDYE1Q8NFV5 336 aaPredicted RBP11.85□□□□□ -0.51
VPS8-202ENST00000421069 PLEKHG5O94827 1062 aa11.84□□□□□ -0.51
VPS8-202ENST00000421069 ZBTB47Q9UFB7 747 aaPredicted RBP11.82□□□□□ -0.52
VPS8-202ENST00000421069 SLC24A1O60721 1099 aa11.81□□□□□ -0.52
VPS8-202ENST00000421069 PKD2Q13563 968 aa11.81□□□□□ -0.52
VPS8-202ENST00000421069 REM2Q8IYK8 340 aaPredicted RBP11.78□□□□□ -0.52
VPS8-202ENST00000421069 CLEC11AQ9Y240 323 aa11.71□□□□□ -0.53
VPS8-202ENST00000421069 PRR29P0C7W0 189 aa11.69□□□□□ -0.54
VPS8-202ENST00000421069 ECM2O94769 699 aaPredicted RBP11.67□□□□□ -0.54
VPS8-202ENST00000421069 CREBZFQ9NS37 354 aa11.63□□□□□ -0.55
VPS8-202ENST00000421069 PITPNM1O00562 1244 aa11.62□□□□□ -0.55
VPS8-202ENST00000421069 DCAF8L2P0C7V8 631 aa11.61□□□□□ -0.55
VPS8-202ENST00000421069 TRIM41Q8WV44 630 aa11.6□□□□□ -0.55
VPS8-202ENST00000421069 CIZ1Q9ULV3 898 aaPredicted RBP11.6□□□□□ -0.55
VPS8-202ENST00000421069 NUBP1P53384 320 aa11.58□□□□□ -0.56
VPS8-202ENST00000421069 GSE1Q14687 1217 aa11.57□□□□□ -0.56
VPS8-202ENST00000421069 MNX1P50219 401 aaPredicted RBP11.56□□□□□ -0.56
VPS8-202ENST00000421069 RGL2O15211 777 aa11.54□□□□□ -0.56
VPS8-202ENST00000421069 PLCB2Q00722 1185 aa11.53□□□□□ -0.56
VPS8-202ENST00000421069 NPM1P06748 294 aaKnown RBP eCLIP11.48□□□□□ -0.57
VPS8-202ENST00000421069 DCAF8Q5TAQ9 597 aa11.47□□□□□ -0.57
VPS8-202ENST00000421069 FAM212AQ96EL1 285 aa11.47□□□□□ -0.57
VPS8-202ENST00000421069 BBXQ8WY36 941 aaPredicted RBP11.45□□□□□ -0.58
VPS8-202ENST00000421069 RASEFQ8IZ41 740 aa11.41□□□□□ -0.58
VPS8-202ENST00000421069 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.41□□□□□ -0.58
VPS8-202ENST00000421069 CHRM1P11229 460 aaPredicted RBP11.4□□□□□ -0.58
VPS8-202ENST00000421069 CHADLQ6NUI6 762 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 180 ms