RNA–Protein interactions for RNA: ENST00000419234.8

BRAP-202, Transcript of BRCA1 associated protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAP, Length 4,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAP-202ENST00000419234 NISCHQ9Y2I1 1504 aa22.7■■□□□ 1.23
BRAP-202ENST00000419234 DCAF8L2P0C7V8 631 aa22.7■■□□□ 1.22
BRAP-202ENST00000419234 SUPT5HO00267 1087 aaKnown RBP22.58■■□□□ 1.2
BRAP-202ENST00000419234 SHROOM4Q9ULL8 1493 aa22.31■■□□□ 1.16
BRAP-202ENST00000419234 EHMT2Q96KQ7 1210 aa21.83■■□□□ 1.09
BRAP-202ENST00000419234 PCGF6Q9BYE7 350 aa21.76■■□□□ 1.07
BRAP-202ENST00000419234 FAM9AQ8IZU1 332 aaPredicted RBP21.26■□□□□ 0.99
BRAP-202ENST00000419234 TTBK1Q5TCY1 1321 aaPredicted RBP21.13■□□□□ 0.97
BRAP-202ENST00000419234 PPARGC1BQ86YN6 1023 aaKnown RBP21.09■□□□□ 0.97
BRAP-202ENST00000419234 HRCP23327 699 aa21.01■□□□□ 0.95
BRAP-202ENST00000419234 LOC105371045A0A1W2PR82 267 aa20.8■□□□□ 0.92
BRAP-202ENST00000419234 CHIC1Q5VXU3 224 aa20.65■□□□□ 0.9
BRAP-202ENST00000419234 CCER1Q8TC90 406 aaPredicted RBP20.64■□□□□ 0.89
BRAP-202ENST00000419234 TRIM41Q8WV44 630 aa20.59■□□□□ 0.89
BRAP-202ENST00000419234 YTHDC1Q96MU7 727 aaKnown RBP20.58■□□□□ 0.89
BRAP-202ENST00000419234 ZEB1P37275 1124 aaPredicted RBP20.5■□□□□ 0.87
BRAP-202ENST00000419234 PELP1Q8IZL8 1130 aaKnown RBP20.5■□□□□ 0.87
BRAP-202ENST00000419234 TRIM26Q12899 539 aaPredicted RBP20.49■□□□□ 0.87
BRAP-202ENST00000419234 CENPBP07199 599 aaPredicted RBP20.48■□□□□ 0.87
BRAP-202ENST00000419234 RANGAP1P46060 587 aaPredicted RBP20.45■□□□□ 0.86
BRAP-202ENST00000419234 APLP2Q06481 763 aa20.26■□□□□ 0.83
BRAP-202ENST00000419234 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.18■□□□□ 0.82
BRAP-202ENST00000419234 UBTFP17480 764 aaKnown RBP20.1■□□□□ 0.81
BRAP-202ENST00000419234 GTF3C3Q9Y5Q9 886 aa19.93■□□□□ 0.78
BRAP-202ENST00000419234 DIEXFQ68CQ4 756 aaKnown RBP19.92■□□□□ 0.78
BRAP-202ENST00000419234 HNRNPUL2Q1KMD3 747 aaKnown RBP19.89■□□□□ 0.78
BRAP-202ENST00000419234 MYT1Q01538 1121 aa19.78■□□□□ 0.76
BRAP-202ENST00000419234 ERICH6Q7L0X2 663 aa19.74■□□□□ 0.75
BRAP-202ENST00000419234 ATP1B4Q9UN42 357 aaPredicted RBP19.74■□□□□ 0.75
BRAP-202ENST00000419234 ITGAEP38570 1179 aa19.72■□□□□ 0.75
BRAP-202ENST00000419234 SCAF1Q9H7N4 1312 aaKnown RBP19.69■□□□□ 0.74
BRAP-202ENST00000419234 MYO15BQ96JP2 1530 aa19.68■□□□□ 0.74
BRAP-202ENST00000419234 ACIN1Q9UKV3 1341 aaKnown RBP19.64■□□□□ 0.73
BRAP-202ENST00000419234 NEFLP07196 543 aa19.6■□□□□ 0.73
BRAP-202ENST00000419234 NEUROD1Q13562 356 aa19.56■□□□□ 0.72
BRAP-202ENST00000419234 BCANQ96GW7 911 aa19.52■□□□□ 0.72
BRAP-202ENST00000419234 CNGB1Q14028 1251 aaPredicted RBP19.44■□□□□ 0.7
BRAP-202ENST00000419234 ZNF316A6NFI3 1004 aaPredicted RBP19.33■□□□□ 0.69
BRAP-202ENST00000419234 DCAF1Q9Y4B6 1507 aa19.29■□□□□ 0.68
BRAP-202ENST00000419234 POLR3GLQ9BT43 218 aa19.19■□□□□ 0.66
BRAP-202ENST00000419234 MIER1Q8N108 512 aa19.09■□□□□ 0.65
BRAP-202ENST00000419234 FAM50AQ14320 339 aaKnown RBP19■□□□□ 0.63
BRAP-202ENST00000419234 ZCCHC6Q5VYS8 1495 aaKnown RBP18.94■□□□□ 0.62
BRAP-202ENST00000419234 PABPN1Q86U42 306 aaKnown RBP eCLIP18.92■□□□□ 0.62
BRAP-202ENST00000419234 FKBP8Q14318 412 aa18.91■□□□□ 0.62
BRAP-202ENST00000419234 CSRNP3Q8WYN3 585 aa18.91■□□□□ 0.62
BRAP-202ENST00000419234 ABCC9O60706 1549 aa18.84■□□□□ 0.61
BRAP-202ENST00000419234 TRIM52Q96A61 297 aa18.81■□□□□ 0.6
BRAP-202ENST00000419234 DDX10Q13206 875 aaKnown RBP18.81■□□□□ 0.6
BRAP-202ENST00000419234 HIRIP3Q9BW71 556 aaPredicted RBP18.8■□□□□ 0.6
BRAP-202ENST00000419234 ANP32CO43423 234 aa18.79■□□□□ 0.6
BRAP-202ENST00000419234 P3H3Q8IVL6 736 aa18.73■□□□□ 0.59
BRAP-202ENST00000419234 RTL5Q5HYW3 569 aaPredicted RBP18.73■□□□□ 0.59
BRAP-202ENST00000419234 CDK11AQ9UQ88 783 aaPredicted RBP18.73■□□□□ 0.59
BRAP-202ENST00000419234 IRX6P78412 446 aaPredicted RBP18.71■□□□□ 0.59
BRAP-202ENST00000419234 CCDC180Q9P1Z9 1646 aa18.71■□□□□ 0.58
BRAP-202ENST00000419234 DAXXQ9UER7 740 aaPredicted RBP18.68■□□□□ 0.58
BRAP-202ENST00000419234 SCRIBQ14160 1630 aa18.65■□□□□ 0.58
BRAP-202ENST00000419234 ZNF326Q5BKZ1 582 aaKnown RBP18.64■□□□□ 0.57
BRAP-202ENST00000419234 HNRNPUQ00839 825 aaKnown RBP eCLIP18.6■□□□□ 0.57
BRAP-202ENST00000419234 ARID3CA6NKF2 412 aa18.56■□□□□ 0.56
BRAP-202ENST00000419234 SENP3-EIF4A1A0A087X0R7 540 aa18.54■□□□□ 0.56
BRAP-202ENST00000419234 RSF1Q96T23 1441 aaPredicted RBP18.54■□□□□ 0.56
BRAP-202ENST00000419234 NBR1Q14596 966 aa18.53■□□□□ 0.56
BRAP-202ENST00000419234 NPM2Q86SE8 214 aaKnown RBP18.53■□□□□ 0.56
BRAP-202ENST00000419234 SUPT16HQ9Y5B9 1047 aaKnown RBP18.51■□□□□ 0.55
BRAP-202ENST00000419234 FAM9BQ8IZU0 186 aa18.49■□□□□ 0.55
BRAP-202ENST00000419234 CEP162Q5TB80 1403 aa18.48■□□□□ 0.55
BRAP-202ENST00000419234 ANP32EQ9BTT0 268 aa18.46■□□□□ 0.55
BRAP-202ENST00000419234 CLSPNQ9HAW4 1339 aa18.46■□□□□ 0.55
BRAP-202ENST00000419234 SALL2Q9Y467 1007 aaPredicted RBP18.41■□□□□ 0.54
BRAP-202ENST00000419234 CLIP1P30622 1438 aa18.34■□□□□ 0.53
BRAP-202ENST00000419234 ANP32AP39687 249 aaKnown RBP18.33■□□□□ 0.52
BRAP-202ENST00000419234 TONSLQ96HA7 1378 aa18.32■□□□□ 0.52
BRAP-202ENST00000419234 EIF5BO60841 1220 aaKnown RBP18.31■□□□□ 0.52
BRAP-202ENST00000419234 SLC4A1APQ9BWU0 796 aaKnown RBP18.3■□□□□ 0.52
BRAP-202ENST00000419234 SIN3AQ96ST3 1273 aa18.3■□□□□ 0.52
BRAP-202ENST00000419234 BCL11AQ9H165 835 aa18.29■□□□□ 0.52
BRAP-202ENST00000419234 CHIC2Q9UKJ5 165 aa18.29■□□□□ 0.52
BRAP-202ENST00000419234 MYT1LQ9UL68 1186 aa18.27■□□□□ 0.52
BRAP-202ENST00000419234 KCNH8Q96L42 1107 aa18.23■□□□□ 0.51
BRAP-202ENST00000419234 TSHZ2Q9NRE2 1034 aa18.23■□□□□ 0.51
BRAP-202ENST00000419234 MRS2Q9HD23 443 aa18.22■□□□□ 0.51
BRAP-202ENST00000419234 SOGA1O94964 1423 aa18.22■□□□□ 0.51
BRAP-202ENST00000419234 CCDC136Q96JN2 1154 aa18.21■□□□□ 0.51
BRAP-202ENST00000419234 RB1CC1Q8TDY2 1594 aa18.19■□□□□ 0.5
BRAP-202ENST00000419234 CECR2Q9BXF3 1484 aa18.19■□□□□ 0.5
BRAP-202ENST00000419234 RBM19Q9Y4C8 960 aaKnown RBP18.17■□□□□ 0.5
BRAP-202ENST00000419234 TNIKQ9UKE5 1360 aa18.16■□□□□ 0.5
BRAP-202ENST00000419234 RTN4Q9NQC3 1192 aaKnown RBP18.14■□□□□ 0.49
BRAP-202ENST00000419234 ZBTB47Q9UFB7 747 aaPredicted RBP18.13■□□□□ 0.49
BRAP-202ENST00000419234 ZNF777Q9ULD5 760 aaPredicted RBP18.13■□□□□ 0.49
BRAP-202ENST00000419234 ARXQ96QS3 562 aa18.12■□□□□ 0.49
BRAP-202ENST00000419234 B4GALNT3Q6L9W6 998 aa18.11■□□□□ 0.49
BRAP-202ENST00000419234 GOLGA3Q08378 1498 aa18.1■□□□□ 0.49
BRAP-202ENST00000419234 RRP7BPQ9NSQ0 103 aa18.07■□□□□ 0.48
BRAP-202ENST00000419234 KANK4Q5T7N3 995 aaPredicted RBP18.05■□□□□ 0.48
BRAP-202ENST00000419234 TMC1Q8TDI8 760 aa18.04■□□□□ 0.48
BRAP-202ENST00000419234 CCDC88BA6NC98 1476 aa18.02■□□□□ 0.47
BRAP-202ENST00000419234 ABCC8Q09428 1581 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms