RNA–Protein interactions for RNA: ENST00000417901.5

USP19-206, Transcript of ubiquitin specific peptidase 19, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP19, Length 4,706 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-206ENST00000417901 NISCHQ9Y2I1 1504 aa24.53■■□□□ 1.52
USP19-206ENST00000417901 DCAF8L2P0C7V8 631 aa23.27■■□□□ 1.32
USP19-206ENST00000417901 SUPT5HO00267 1087 aaKnown RBP22.32■■□□□ 1.16
USP19-206ENST00000417901 SHROOM4Q9ULL8 1493 aa22.29■■□□□ 1.16
USP19-206ENST00000417901 EHMT2Q96KQ7 1210 aa21■□□□□ 0.95
USP19-206ENST00000417901 FAM9AQ8IZU1 332 aaPredicted RBP20.86■□□□□ 0.93
USP19-206ENST00000417901 TRIM41Q8WV44 630 aa20.8■□□□□ 0.92
USP19-206ENST00000417901 PELP1Q8IZL8 1130 aaKnown RBP20.78■□□□□ 0.92
USP19-206ENST00000417901 ABCC9O60706 1549 aa20.56■□□□□ 0.88
USP19-206ENST00000417901 PCGF6Q9BYE7 350 aa20.55■□□□□ 0.88
USP19-206ENST00000417901 APLP2Q06481 763 aa20.54■□□□□ 0.88
USP19-206ENST00000417901 CHIC1Q5VXU3 224 aa20.51■□□□□ 0.87
USP19-206ENST00000417901 MYT1Q01538 1121 aa20.48■□□□□ 0.87
USP19-206ENST00000417901 CCDC180Q9P1Z9 1646 aa20.44■□□□□ 0.86
USP19-206ENST00000417901 ZCCHC6Q5VYS8 1495 aaKnown RBP20.43■□□□□ 0.86
USP19-206ENST00000417901 UBTFP17480 764 aaKnown RBP20.28■□□□□ 0.84
USP19-206ENST00000417901 TTBK1Q5TCY1 1321 aaPredicted RBP20.25■□□□□ 0.83
USP19-206ENST00000417901 RANGAP1P46060 587 aaPredicted RBP20.18■□□□□ 0.82
USP19-206ENST00000417901 CENPBP07199 599 aaPredicted RBP20.18■□□□□ 0.82
USP19-206ENST00000417901 LOC105371045A0A1W2PR82 267 aa20.16■□□□□ 0.82
USP19-206ENST00000417901 ERICH6Q7L0X2 663 aa20.14■□□□□ 0.81
USP19-206ENST00000417901 PABPN1Q86U42 306 aaKnown RBP eCLIP20.11■□□□□ 0.81
USP19-206ENST00000417901 ZEB1P37275 1124 aaPredicted RBP20.09■□□□□ 0.81
USP19-206ENST00000417901 TRIM26Q12899 539 aaPredicted RBP20.01■□□□□ 0.79
USP19-206ENST00000417901 CCER1Q8TC90 406 aaPredicted RBP19.97■□□□□ 0.79
USP19-206ENST00000417901 SCRIBQ14160 1630 aa19.92■□□□□ 0.78
USP19-206ENST00000417901 PPARGC1BQ86YN6 1023 aaKnown RBP19.9■□□□□ 0.78
USP19-206ENST00000417901 ATP1B4Q9UN42 357 aaPredicted RBP19.88■□□□□ 0.77
USP19-206ENST00000417901 YTHDC1Q96MU7 727 aaKnown RBP19.81■□□□□ 0.76
USP19-206ENST00000417901 HRCP23327 699 aa19.76■□□□□ 0.75
USP19-206ENST00000417901 DCAF1Q9Y4B6 1507 aa19.69■□□□□ 0.74
USP19-206ENST00000417901 NACADO15069 1562 aa19.61■□□□□ 0.73
USP19-206ENST00000417901 RB1CC1Q8TDY2 1594 aa19.59■□□□□ 0.73
USP19-206ENST00000417901 RSF1Q96T23 1441 aaPredicted RBP19.51■□□□□ 0.71
USP19-206ENST00000417901 NEFLP07196 543 aa19.46■□□□□ 0.71
USP19-206ENST00000417901 CSRNP3Q8WYN3 585 aa19.46■□□□□ 0.71
USP19-206ENST00000417901 HNRNPUL2Q1KMD3 747 aaKnown RBP19.45■□□□□ 0.7
USP19-206ENST00000417901 ITGAEP38570 1179 aa19.39■□□□□ 0.69
USP19-206ENST00000417901 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.31■□□□□ 0.68
USP19-206ENST00000417901 MYO15BQ96JP2 1530 aa19.19■□□□□ 0.66
USP19-206ENST00000417901 CECR2Q9BXF3 1484 aa19.19■□□□□ 0.66
USP19-206ENST00000417901 BAZ1AQ9NRL2 1556 aaPredicted RBP19.16■□□□□ 0.66
USP19-206ENST00000417901 FAM50AQ14320 339 aaKnown RBP19.08■□□□□ 0.65
USP19-206ENST00000417901 BAZ1BQ9UIG0 1483 aaKnown RBP19.01■□□□□ 0.63
USP19-206ENST00000417901 GTF3C3Q9Y5Q9 886 aa19■□□□□ 0.63
USP19-206ENST00000417901 MROH2BQ7Z745 1585 aa18.98■□□□□ 0.63
USP19-206ENST00000417901 EEA1Q15075 1411 aa18.98■□□□□ 0.63
USP19-206ENST00000417901 P3H3Q8IVL6 736 aa18.96■□□□□ 0.63
USP19-206ENST00000417901 DIEXFQ68CQ4 756 aaKnown RBP18.95■□□□□ 0.62
USP19-206ENST00000417901 WRNQ14191 1432 aaPredicted RBP eCLIP18.95■□□□□ 0.62
USP19-206ENST00000417901 FBLN2P98095 1184 aa18.89■□□□□ 0.62
USP19-206ENST00000417901 DAXXQ9UER7 740 aaPredicted RBP18.89■□□□□ 0.61
USP19-206ENST00000417901 RTL5Q5HYW3 569 aaPredicted RBP18.88■□□□□ 0.61
USP19-206ENST00000417901 MYT1LQ9UL68 1186 aa18.86■□□□□ 0.61
USP19-206ENST00000417901 CLIP1P30622 1438 aa18.82■□□□□ 0.6
USP19-206ENST00000417901 GOLGA3Q08378 1498 aa18.81■□□□□ 0.6
USP19-206ENST00000417901 TRIM52Q96A61 297 aa18.81■□□□□ 0.6
USP19-206ENST00000417901 NEUROD1Q13562 356 aa18.78■□□□□ 0.6
USP19-206ENST00000417901 CEP162Q5TB80 1403 aa18.78■□□□□ 0.6
USP19-206ENST00000417901 CCDC88BA6NC98 1476 aa18.77■□□□□ 0.6
USP19-206ENST00000417901 TNIKQ9UKE5 1360 aa18.76■□□□□ 0.59
USP19-206ENST00000417901 BCANQ96GW7 911 aa18.74■□□□□ 0.59
USP19-206ENST00000417901 ZNF316A6NFI3 1004 aaPredicted RBP18.74■□□□□ 0.59
USP19-206ENST00000417901 POLR3GLQ9BT43 218 aa18.73■□□□□ 0.59
USP19-206ENST00000417901 WIZO95785 1651 aa18.71■□□□□ 0.59
USP19-206ENST00000417901 CEP164Q9UPV0 1460 aa18.7■□□□□ 0.58
USP19-206ENST00000417901 KIF27Q86VH2 1401 aa18.69■□□□□ 0.58
USP19-206ENST00000417901 ARID3CA6NKF2 412 aa18.68■□□□□ 0.58
USP19-206ENST00000417901 CDK11AQ9UQ88 783 aaPredicted RBP18.68■□□□□ 0.58
USP19-206ENST00000417901 SMARCA2P51531 1590 aa18.67■□□□□ 0.58
USP19-206ENST00000417901 TOP2AP11388 1531 aaKnown RBP18.66■□□□□ 0.58
USP19-206ENST00000417901 SOGA1O94964 1423 aa18.63■□□□□ 0.57
USP19-206ENST00000417901 ACIN1Q9UKV3 1341 aaKnown RBP18.6■□□□□ 0.57
USP19-206ENST00000417901 ABCC8Q09428 1581 aa18.58■□□□□ 0.56
USP19-206ENST00000417901 EIF5BO60841 1220 aaKnown RBP18.57■□□□□ 0.56
USP19-206ENST00000417901 SMARCA4P51532 1647 aa18.56■□□□□ 0.56
USP19-206ENST00000417901 CNGB1Q14028 1251 aaPredicted RBP18.55■□□□□ 0.56
USP19-206ENST00000417901 ATAD2BQ9ULI0 1458 aa18.51■□□□□ 0.55
USP19-206ENST00000417901 ZNF777Q9ULD5 760 aaPredicted RBP18.51■□□□□ 0.55
USP19-206ENST00000417901 MTUS2Q5JR59 1369 aa18.5■□□□□ 0.55
USP19-206ENST00000417901 CHMP7Q8WUX9 453 aaPredicted RBP18.47■□□□□ 0.55
USP19-206ENST00000417901 ANP32CO43423 234 aa18.45■□□□□ 0.54
USP19-206ENST00000417901 ZNF326Q5BKZ1 582 aaKnown RBP18.44■□□□□ 0.54
USP19-206ENST00000417901 CUX2O14529 1486 aa18.43■□□□□ 0.54
USP19-206ENST00000417901 CARMIL1Q5VZK9 1371 aa18.41■□□□□ 0.54
USP19-206ENST00000417901 TONSLQ96HA7 1378 aa18.39■□□□□ 0.53
USP19-206ENST00000417901 CHIC2Q9UKJ5 165 aa18.36■□□□□ 0.53
USP19-206ENST00000417901 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
USP19-206ENST00000417901 CADPSQ9ULU8 1353 aa18.33■□□□□ 0.53
USP19-206ENST00000417901 CLSPNQ9HAW4 1339 aa18.32■□□□□ 0.52
USP19-206ENST00000417901 VPS8Q8N3P4 1428 aa18.32■□□□□ 0.52
USP19-206ENST00000417901 FHAD1B1AJZ9 1412 aa18.28■□□□□ 0.52
USP19-206ENST00000417901 PDS5BQ9NTI5 1447 aa18.26■□□□□ 0.51
USP19-206ENST00000417901 TSPY4P0CV99 314 aa18.25■□□□□ 0.51
USP19-206ENST00000417901 TSPY10P0CW01 314 aa18.25■□□□□ 0.51
USP19-206ENST00000417901 SLC4A1APQ9BWU0 796 aaKnown RBP18.25■□□□□ 0.51
USP19-206ENST00000417901 ERCC6Q03468 1493 aa18.22■□□□□ 0.51
USP19-206ENST00000417901 PLEKHD1A6NEE1 506 aa18.2■□□□□ 0.5
USP19-206ENST00000417901 RRP7BPQ9NSQ0 103 aa18.2■□□□□ 0.5
USP19-206ENST00000417901 CCNB3Q8WWL7 1395 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms