RNA–Protein interactions for RNA: ENST00000417762.5

SHPRH-204, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-204ENST00000417762 AEBP2Q6ZN18 517 aaPredicted RBP27.27■■□□□ 1.96
SHPRH-204ENST00000417762 CHIC1Q5VXU3 224 aa25.86■■□□□ 1.73
SHPRH-204ENST00000417762 SENP3Q9H4L4 574 aaPredicted RBP23.31■■□□□ 1.32
SHPRH-204ENST00000417762 PHF23Q9BUL5 403 aaPredicted RBP22.97■■□□□ 1.27
SHPRH-204ENST00000417762 FOXD1Q16676 465 aa21.7■■□□□ 1.06
SHPRH-204ENST00000417762 PLPPR3Q6T4P5 718 aa20.64■□□□□ 0.89
SHPRH-204ENST00000417762 MSH5O43196 834 aa20.36■□□□□ 0.85
SHPRH-204ENST00000417762 PIAS4Q8N2W9 510 aaPredicted RBP20.26■□□□□ 0.83
SHPRH-204ENST00000417762 PPP6R1Q9UPN7 881 aa20.23■□□□□ 0.83
SHPRH-204ENST00000417762 ADRA2BP18089 450 aa20.16■□□□□ 0.82
SHPRH-204ENST00000417762 POTEDQ86YR6 584 aa19.96■□□□□ 0.79
SHPRH-204ENST00000417762 MAPK8IP2Q13387 824 aaPredicted RBP18.53■□□□□ 0.56
SHPRH-204ENST00000417762 SCAF1Q9H7N4 1312 aaKnown RBP18.48■□□□□ 0.55
SHPRH-204ENST00000417762 DMRT2Q9Y5R5 561 aa18.47■□□□□ 0.55
SHPRH-204ENST00000417762 PPP4R3CPQ6ZMV5 832 aa18.06■□□□□ 0.48
SHPRH-204ENST00000417762 HOXD11P31277 338 aaPredicted RBP17.77■□□□□ 0.44
SHPRH-204ENST00000417762 CNKSR2Q8WXI2 1034 aa17.76■□□□□ 0.43
SHPRH-204ENST00000417762 DCAF8L1A6NGE4 600 aa17.67■□□□□ 0.42
SHPRH-204ENST00000417762 RNF216Q9NWF9 866 aaPredicted RBP17.62■□□□□ 0.41
SHPRH-204ENST00000417762 CACNB1Q02641 598 aaPredicted RBP17.49■□□□□ 0.39
SHPRH-204ENST00000417762 NCBP3Q53F19 620 aaKnown RBP17.37■□□□□ 0.37
SHPRH-204ENST00000417762 RNF39Q9H2S5 420 aa17.36■□□□□ 0.37
SHPRH-204ENST00000417762 DNAJC5BQ9UF47 199 aa17.21■□□□□ 0.35
SHPRH-204ENST00000417762 C1QBPQ07021 282 aaKnown RBP17.12■□□□□ 0.33
SHPRH-204ENST00000417762 NPM3O75607 178 aaKnown RBP17.1■□□□□ 0.33
SHPRH-204ENST00000417762 NISCHQ9Y2I1 1504 aa16.96■□□□□ 0.3
SHPRH-204ENST00000417762 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.91■□□□□ 0.3
SHPRH-204ENST00000417762 KCNA4P22459 653 aa16.7■□□□□ 0.26
SHPRH-204ENST00000417762 U3KPZ7 1027 aaPredicted RBP16.54■□□□□ 0.24
SHPRH-204ENST00000417762 SLC4A2P04920 1241 aa16.35■□□□□ 0.21
SHPRH-204ENST00000417762 SPINK5Q9NQ38 1064 aaPredicted RBP16.31■□□□□ 0.2
SHPRH-204ENST00000417762 CAPN15O75808 1086 aa16.29■□□□□ 0.2
SHPRH-204ENST00000417762 DSG3P32926 999 aa16.23■□□□□ 0.19
SHPRH-204ENST00000417762 APLP2Q06481 763 aa16.12■□□□□ 0.17
SHPRH-204ENST00000417762 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.09■□□□□ 0.17
SHPRH-204ENST00000417762 HNRNPUL2Q1KMD3 747 aaKnown RBP16.09■□□□□ 0.17
SHPRH-204ENST00000417762 ZNF219Q9P2Y4 722 aaPredicted RBP16.02■□□□□ 0.16
SHPRH-204ENST00000417762 TRHP20396 242 aaPredicted RBP16■□□□□ 0.15
SHPRH-204ENST00000417762 SAMD1Q6SPF0 538 aaPredicted RBP15.99■□□□□ 0.15
SHPRH-204ENST00000417762 ABCB7O75027 752 aa15.89■□□□□ 0.13
SHPRH-204ENST00000417762 MYCNP04198 464 aaPredicted RBP15.83■□□□□ 0.12
SHPRH-204ENST00000417762 SLC4A1APQ9BWU0 796 aaKnown RBP15.76■□□□□ 0.11
SHPRH-204ENST00000417762 POTEHQ6S545 545 aa15.64■□□□□ 0.09
SHPRH-204ENST00000417762 FOXD4L1Q9NU39 408 aa15.64■□□□□ 0.09
SHPRH-204ENST00000417762 POLA2Q14181 598 aa15.57■□□□□ 0.08
SHPRH-204ENST00000417762 RBM42Q9BTD8 480 aaKnown RBP15.51■□□□□ 0.07
SHPRH-204ENST00000417762 ATF5Q9Y2D1 282 aaPredicted RBP15.43■□□□□ 0.06
SHPRH-204ENST00000417762 ZBTB22O15209 634 aa15.35■□□□□ 0.05
SHPRH-204ENST00000417762 ZBTB12Q9Y330 459 aaPredicted RBP15.3■□□□□ 0.04
SHPRH-204ENST00000417762 ATXN8OSP0DMR3 200 aa15.18■□□□□ 0.02
SHPRH-204ENST00000417762 CHRDL2Q6WN34 429 aa15.18■□□□□ 0.02
SHPRH-204ENST00000417762 AKT1S1Q96B36 256 aa15.14■□□□□ 0.01
SHPRH-204ENST00000417762 OSCARQ8IYS5 282 aa15.09■□□□□ 0.01
SHPRH-204ENST00000417762 REM2Q8IYK8 340 aaPredicted RBP14.98□□□□□ -0.01
SHPRH-204ENST00000417762 FBLN2P98095 1184 aa14.87□□□□□ -0.03
SHPRH-204ENST00000417762 SPDYE2BA6NHP3 402 aa14.82□□□□□ -0.04
SHPRH-204ENST00000417762 SPDYE6P0CI01 402 aa14.82□□□□□ -0.04
SHPRH-204ENST00000417762 SPDYE2Q495Y8 402 aa14.82□□□□□ -0.04
SHPRH-204ENST00000417762 PITPNM1O00562 1244 aa14.81□□□□□ -0.04
SHPRH-204ENST00000417762 PIP4P2Q8N4L2 257 aa14.8□□□□□ -0.04
SHPRH-204ENST00000417762 MKRN4PQ13434 485 aaPredicted RBP14.74□□□□□ -0.05
SHPRH-204ENST00000417762 FXR2P51116 673 aaKnown RBP eCLIP14.71□□□□□ -0.05
SHPRH-204ENST00000417762 CCDC180Q9P1Z9 1646 aa14.67□□□□□ -0.06
SHPRH-204ENST00000417762 SP7Q8TDD2 431 aaPredicted RBP14.63□□□□□ -0.07
SHPRH-204ENST00000417762 SSUH2Q9Y2M2 353 aa14.61□□□□□ -0.07
SHPRH-204ENST00000417762 ZNF692Q9BU19 519 aaPredicted RBP14.6□□□□□ -0.07
SHPRH-204ENST00000417762 CSRNP3Q8WYN3 585 aa14.59□□□□□ -0.07
SHPRH-204ENST00000417762 SPDYE1Q8NFV5 336 aaPredicted RBP14.56□□□□□ -0.08
SHPRH-204ENST00000417762 HAX1O00165 279 aa14.53□□□□□ -0.08
SHPRH-204ENST00000417762 CLEC11AQ9Y240 323 aa14.5□□□□□ -0.09
SHPRH-204ENST00000417762 PRKAR2AP13861 404 aaKnown RBP14.43□□□□□ -0.1
SHPRH-204ENST00000417762 PABPN1Q86U42 306 aaKnown RBP eCLIP14.38□□□□□ -0.11
SHPRH-204ENST00000417762 EHMT2Q96KQ7 1210 aa14.34□□□□□ -0.11
SHPRH-204ENST00000417762 EVX2Q03828 476 aa14.33□□□□□ -0.12
SHPRH-204ENST00000417762 PRR29P0C7W0 189 aa14.27□□□□□ -0.13
SHPRH-204ENST00000417762 ZCCHC6Q5VYS8 1495 aaKnown RBP14.25□□□□□ -0.13
SHPRH-204ENST00000417762 C19orf67A6NJJ6 358 aa14.24□□□□□ -0.13
SHPRH-204ENST00000417762 CHADLQ6NUI6 762 aa14.23□□□□□ -0.13
SHPRH-204ENST00000417762 FARP1Q9Y4F1 1045 aaPredicted RBP14.04□□□□□ -0.16
SHPRH-204ENST00000417762 GABBR2O75899 941 aa14.03□□□□□ -0.16
SHPRH-204ENST00000417762 DCAF1Q9Y4B6 1507 aa14.02□□□□□ -0.16
SHPRH-204ENST00000417762 SPDYE4A6NLX3 237 aa14.02□□□□□ -0.17
SHPRH-204ENST00000417762 STAG3Q9UJ98 1225 aa14.01□□□□□ -0.17
SHPRH-204ENST00000417762 DCAF8L2P0C7V8 631 aa14□□□□□ -0.17
SHPRH-204ENST00000417762 CD44P16070 742 aaKnown RBP13.97□□□□□ -0.17
SHPRH-204ENST00000417762 SHROOM4Q9ULL8 1493 aa13.92□□□□□ -0.18
SHPRH-204ENST00000417762 CREBZFQ9NS37 354 aa13.9□□□□□ -0.18
SHPRH-204ENST00000417762 CLCN6P51797 869 aa13.84□□□□□ -0.19
SHPRH-204ENST00000417762 ABCC9O60706 1549 aa13.81□□□□□ -0.2
SHPRH-204ENST00000417762 MYO15BQ96JP2 1530 aa13.81□□□□□ -0.2
SHPRH-204ENST00000417762 ZNF579Q8NAF0 562 aaKnown RBP13.77□□□□□ -0.21
SHPRH-204ENST00000417762 ZRANB1Q9UGI0 708 aa13.75□□□□□ -0.21
SHPRH-204ENST00000417762 POTEIP0CG38 1075 aa13.73□□□□□ -0.21
SHPRH-204ENST00000417762 LHX8Q68G74 356 aa13.71□□□□□ -0.21
SHPRH-204ENST00000417762 PROM2Q8N271 834 aa13.7□□□□□ -0.22
SHPRH-204ENST00000417762 NACADO15069 1562 aa13.68□□□□□ -0.22
SHPRH-204ENST00000417762 NPM1P06748 294 aaKnown RBP eCLIP13.66□□□□□ -0.22
SHPRH-204ENST00000417762 MNX1P50219 401 aaPredicted RBP13.66□□□□□ -0.22
SHPRH-204ENST00000417762 PAK3O75914 559 aaPredicted RBP13.64□□□□□ -0.23
SHPRH-204ENST00000417762 DCBLD2Q96PD2 775 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 211.9 ms