RNA–Protein interactions for RNA: ENST00000417715.1

LINC01853-201, Transcript of long intergenic non-protein coding RNA 1853, humanhuman

TSL 3 BASIC

Gene LINC01853, Length 444 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01853-201ENST00000417715 AEBP2Q6ZN18 517 aaPredicted RBP23.94■■□□□ 1.42
LINC01853-201ENST00000417715 CHIC1Q5VXU3 224 aa22.82■■□□□ 1.24
LINC01853-201ENST00000417715 SENP3Q9H4L4 574 aaPredicted RBP20.33■□□□□ 0.85
LINC01853-201ENST00000417715 PHF23Q9BUL5 403 aaPredicted RBP20.1■□□□□ 0.81
LINC01853-201ENST00000417715 FOXD1Q16676 465 aa18.97■□□□□ 0.63
LINC01853-201ENST00000417715 PLPPR3Q6T4P5 718 aa18.25■□□□□ 0.51
LINC01853-201ENST00000417715 PPP6R1Q9UPN7 881 aa17.86■□□□□ 0.45
LINC01853-201ENST00000417715 ADRA2BP18089 450 aa17.75■□□□□ 0.43
LINC01853-201ENST00000417715 PIAS4Q8N2W9 510 aaPredicted RBP17.68■□□□□ 0.42
LINC01853-201ENST00000417715 MSH5O43196 834 aa17.66■□□□□ 0.42
LINC01853-201ENST00000417715 POTEDQ86YR6 584 aa17.07■□□□□ 0.32
LINC01853-201ENST00000417715 MAPK8IP2Q13387 824 aaPredicted RBP16.28■□□□□ 0.2
LINC01853-201ENST00000417715 SCAF1Q9H7N4 1312 aaKnown RBP16.19■□□□□ 0.18
LINC01853-201ENST00000417715 DMRT2Q9Y5R5 561 aa16.18■□□□□ 0.18
LINC01853-201ENST00000417715 PPP4R3CPQ6ZMV5 832 aa16.01■□□□□ 0.15
LINC01853-201ENST00000417715 CNKSR2Q8WXI2 1034 aa15.69■□□□□ 0.1
LINC01853-201ENST00000417715 HOXD11P31277 338 aaPredicted RBP15.67■□□□□ 0.1
LINC01853-201ENST00000417715 RNF216Q9NWF9 866 aaPredicted RBP15.54■□□□□ 0.08
LINC01853-201ENST00000417715 NCBP3Q53F19 620 aaKnown RBP15.38■□□□□ 0.05
LINC01853-201ENST00000417715 DCAF8L1A6NGE4 600 aa15.33■□□□□ 0.04
LINC01853-201ENST00000417715 NPM3O75607 178 aaKnown RBP15.23■□□□□ 0.03
LINC01853-201ENST00000417715 DNAJC5BQ9UF47 199 aa15.15■□□□□ 0.02
LINC01853-201ENST00000417715 RNF39Q9H2S5 420 aa15.14■□□□□ 0.01
LINC01853-201ENST00000417715 CACNB1Q02641 598 aaPredicted RBP15.03■□□□□ -0
LINC01853-201ENST00000417715 KCNA4P22459 653 aa15.02■□□□□ -0
LINC01853-201ENST00000417715 C1QBPQ07021 282 aaKnown RBP14.9□□□□□ -0.02
LINC01853-201ENST00000417715 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.78□□□□□ -0.04
LINC01853-201ENST00000417715 U3KPZ7 1027 aaPredicted RBP14.59□□□□□ -0.07
LINC01853-201ENST00000417715 SLC4A2P04920 1241 aa14.55□□□□□ -0.08
LINC01853-201ENST00000417715 SPINK5Q9NQ38 1064 aaPredicted RBP14.31□□□□□ -0.12
LINC01853-201ENST00000417715 CAPN15O75808 1086 aa14.2□□□□□ -0.14
LINC01853-201ENST00000417715 DSG3P32926 999 aa14.2□□□□□ -0.14
LINC01853-201ENST00000417715 SLC4A1APQ9BWU0 796 aaKnown RBP14.16□□□□□ -0.14
LINC01853-201ENST00000417715 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.15□□□□□ -0.14
LINC01853-201ENST00000417715 HNRNPUL2Q1KMD3 747 aaKnown RBP14.15□□□□□ -0.14
LINC01853-201ENST00000417715 APLP2Q06481 763 aa14.09□□□□□ -0.15
LINC01853-201ENST00000417715 SAMD1Q6SPF0 538 aaPredicted RBP14.08□□□□□ -0.16
LINC01853-201ENST00000417715 MYCNP04198 464 aaPredicted RBP14.04□□□□□ -0.16
LINC01853-201ENST00000417715 ZNF219Q9P2Y4 722 aaPredicted RBP14.03□□□□□ -0.16
LINC01853-201ENST00000417715 TRHP20396 242 aaPredicted RBP14□□□□□ -0.17
LINC01853-201ENST00000417715 FOXD4L1Q9NU39 408 aa13.97□□□□□ -0.17
LINC01853-201ENST00000417715 ABCB7O75027 752 aa13.89□□□□□ -0.19
LINC01853-201ENST00000417715 ZBTB22O15209 634 aa13.86□□□□□ -0.19
LINC01853-201ENST00000417715 ATF5Q9Y2D1 282 aaPredicted RBP13.76□□□□□ -0.21
LINC01853-201ENST00000417715 POLA2Q14181 598 aa13.71□□□□□ -0.21
LINC01853-201ENST00000417715 ATXN8OSP0DMR3 200 aa13.57□□□□□ -0.24
LINC01853-201ENST00000417715 RBM42Q9BTD8 480 aaKnown RBP13.48□□□□□ -0.25
LINC01853-201ENST00000417715 ZBTB12Q9Y330 459 aaPredicted RBP13.42□□□□□ -0.26
LINC01853-201ENST00000417715 POTEHQ6S545 545 aa13.37□□□□□ -0.27
LINC01853-201ENST00000417715 CSRNP3Q8WYN3 585 aa13.32□□□□□ -0.28
LINC01853-201ENST00000417715 OSCARQ8IYS5 282 aa13.26□□□□□ -0.29
LINC01853-201ENST00000417715 AKT1S1Q96B36 256 aa13.23□□□□□ -0.29
LINC01853-201ENST00000417715 CHRDL2Q6WN34 429 aa13.16□□□□□ -0.3
LINC01853-201ENST00000417715 MKRN4PQ13434 485 aaPredicted RBP13.15□□□□□ -0.3
LINC01853-201ENST00000417715 REM2Q8IYK8 340 aaPredicted RBP13.11□□□□□ -0.31
LINC01853-201ENST00000417715 FBLN2P98095 1184 aa13.1□□□□□ -0.31
LINC01853-201ENST00000417715 EHMT2Q96KQ7 1210 aa13.07□□□□□ -0.32
LINC01853-201ENST00000417715 SPDYE2BA6NHP3 402 aa13.05□□□□□ -0.32
LINC01853-201ENST00000417715 SPDYE6P0CI01 402 aa13.05□□□□□ -0.32
LINC01853-201ENST00000417715 SPDYE2Q495Y8 402 aa13.05□□□□□ -0.32
LINC01853-201ENST00000417715 PITPNM1O00562 1244 aa12.96□□□□□ -0.33
LINC01853-201ENST00000417715 SSUH2Q9Y2M2 353 aa12.94□□□□□ -0.34
LINC01853-201ENST00000417715 PIP4P2Q8N4L2 257 aa12.89□□□□□ -0.35
LINC01853-201ENST00000417715 FXR2P51116 673 aaKnown RBP eCLIP12.88□□□□□ -0.35
LINC01853-201ENST00000417715 ZNF692Q9BU19 519 aaPredicted RBP12.87□□□□□ -0.35
LINC01853-201ENST00000417715 SPDYE1Q8NFV5 336 aaPredicted RBP12.76□□□□□ -0.37
LINC01853-201ENST00000417715 PABPN1Q86U42 306 aaKnown RBP eCLIP12.69□□□□□ -0.38
LINC01853-201ENST00000417715 CLEC11AQ9Y240 323 aa12.67□□□□□ -0.38
LINC01853-201ENST00000417715 PRKAR2AP13861 404 aaKnown RBP12.59□□□□□ -0.39
LINC01853-201ENST00000417715 SP7Q8TDD2 431 aaPredicted RBP12.59□□□□□ -0.39
LINC01853-201ENST00000417715 HAX1O00165 279 aa12.55□□□□□ -0.4
LINC01853-201ENST00000417715 PRR29P0C7W0 189 aa12.52□□□□□ -0.41
LINC01853-201ENST00000417715 EVX2Q03828 476 aa12.52□□□□□ -0.41
LINC01853-201ENST00000417715 SPDYE4A6NLX3 237 aa12.51□□□□□ -0.41
LINC01853-201ENST00000417715 CHADLQ6NUI6 762 aa12.48□□□□□ -0.41
LINC01853-201ENST00000417715 C19orf67A6NJJ6 358 aa12.45□□□□□ -0.42
LINC01853-201ENST00000417715 STAG3Q9UJ98 1225 aa12.38□□□□□ -0.43
LINC01853-201ENST00000417715 PROM2Q8N271 834 aa12.36□□□□□ -0.43
LINC01853-201ENST00000417715 FARP1Q9Y4F1 1045 aaPredicted RBP12.34□□□□□ -0.43
LINC01853-201ENST00000417715 CREBZFQ9NS37 354 aa12.32□□□□□ -0.44
LINC01853-201ENST00000417715 GABBR2O75899 941 aa12.21□□□□□ -0.45
LINC01853-201ENST00000417715 CD44P16070 742 aaKnown RBP12.19□□□□□ -0.46
LINC01853-201ENST00000417715 MNX1P50219 401 aaPredicted RBP12.18□□□□□ -0.46
LINC01853-201ENST00000417715 CLCN6P51797 869 aa12.07□□□□□ -0.48
LINC01853-201ENST00000417715 ZNF579Q8NAF0 562 aaKnown RBP12.07□□□□□ -0.48
LINC01853-201ENST00000417715 ZRANB1Q9UGI0 708 aa12.03□□□□□ -0.48
LINC01853-201ENST00000417715 NPM1P06748 294 aaKnown RBP eCLIP12.01□□□□□ -0.49
LINC01853-201ENST00000417715 POTEIP0CG38 1075 aa12.01□□□□□ -0.49
LINC01853-201ENST00000417715 FKBP8Q14318 412 aa11.98□□□□□ -0.49
LINC01853-201ENST00000417715 PAK3O75914 559 aaPredicted RBP11.9□□□□□ -0.5
LINC01853-201ENST00000417715 GALR2O43603 387 aaPredicted RBP11.89□□□□□ -0.51
LINC01853-201ENST00000417715 PHF12Q96QT6 1004 aa11.89□□□□□ -0.51
LINC01853-201ENST00000417715 MIER1Q8N108 512 aa11.88□□□□□ -0.51
LINC01853-201ENST00000417715 CCDC61Q9Y6R9 512 aa11.83□□□□□ -0.52
LINC01853-201ENST00000417715 DCBLD2Q96PD2 775 aa11.82□□□□□ -0.52
LINC01853-201ENST00000417715 PLEKHG5O94827 1062 aa11.8□□□□□ -0.52
LINC01853-201ENST00000417715 LHX8Q68G74 356 aa11.8□□□□□ -0.52
LINC01853-201ENST00000417715 RASEFQ8IZ41 740 aa11.78□□□□□ -0.52
LINC01853-201ENST00000417715 TSPYL2Q9H2G4 693 aaPredicted RBP11.78□□□□□ -0.52
LINC01853-201ENST00000417715 PLCD3Q8N3E9 789 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms