RNA–Protein interactions for RNA: ENST00000417506.1

AC004941.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC004941.1, Length 3,120 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004941.1-201ENST00000417506 NISCHQ9Y2I1 1504 aa17.28■□□□□ 0.36
AC004941.1-201ENST00000417506 CCDC180Q9P1Z9 1646 aa15.5■□□□□ 0.07
AC004941.1-201ENST00000417506 DCAF8L2P0C7V8 631 aa15.04■□□□□ -0
AC004941.1-201ENST00000417506 SHROOM4Q9ULL8 1493 aa14.84□□□□□ -0.03
AC004941.1-201ENST00000417506 MYO15BQ96JP2 1530 aa14.68□□□□□ -0.06
AC004941.1-201ENST00000417506 DCAF1Q9Y4B6 1507 aa14.56□□□□□ -0.08
AC004941.1-201ENST00000417506 ZCCHC6Q5VYS8 1495 aaKnown RBP14.48□□□□□ -0.09
AC004941.1-201ENST00000417506 ABCC9O60706 1549 aa14.45□□□□□ -0.1
AC004941.1-201ENST00000417506 SUPT5HO00267 1087 aaKnown RBP14.37□□□□□ -0.11
AC004941.1-201ENST00000417506 AEBP2Q6ZN18 517 aaPredicted RBP14.31□□□□□ -0.12
AC004941.1-201ENST00000417506 NACADO15069 1562 aa14.27□□□□□ -0.12
AC004941.1-201ENST00000417506 CHIC1Q5VXU3 224 aa14.23□□□□□ -0.13
AC004941.1-201ENST00000417506 RB1CC1Q8TDY2 1594 aa14.09□□□□□ -0.15
AC004941.1-201ENST00000417506 SCRIBQ14160 1630 aa14.03□□□□□ -0.16
AC004941.1-201ENST00000417506 PABPN1Q86U42 306 aaKnown RBP eCLIP13.85□□□□□ -0.19
AC004941.1-201ENST00000417506 UNC13AQ9UPW8 1703 aa13.82□□□□□ -0.2
AC004941.1-201ENST00000417506 CECR2Q9BXF3 1484 aa13.64□□□□□ -0.23
AC004941.1-201ENST00000417506 BICRAQ9NZM4 1560 aa13.61□□□□□ -0.23
AC004941.1-201ENST00000417506 RSF1Q96T23 1441 aaPredicted RBP13.57□□□□□ -0.24
AC004941.1-201ENST00000417506 MROH2BQ7Z745 1585 aa13.49□□□□□ -0.25
AC004941.1-201ENST00000417506 EHMT2Q96KQ7 1210 aa13.43□□□□□ -0.26
AC004941.1-201ENST00000417506 WIZO95785 1651 aa13.39□□□□□ -0.27
AC004941.1-201ENST00000417506 PEG3Q9GZU2 1588 aa13.39□□□□□ -0.27
AC004941.1-201ENST00000417506 FAM9AQ8IZU1 332 aaPredicted RBP13.37□□□□□ -0.27
AC004941.1-201ENST00000417506 BAZ1AQ9NRL2 1556 aaPredicted RBP13.31□□□□□ -0.28
AC004941.1-201ENST00000417506 TRIM41Q8WV44 630 aa13.3□□□□□ -0.28
AC004941.1-201ENST00000417506 LOC105371045A0A1W2PR82 267 aa13.26□□□□□ -0.29
AC004941.1-201ENST00000417506 SMARCA4P51532 1647 aa13.24□□□□□ -0.29
AC004941.1-201ENST00000417506 SMARCA2P51531 1590 aa13.24□□□□□ -0.29
AC004941.1-201ENST00000417506 HMGXB3Q12766 1538 aa13.16□□□□□ -0.3
AC004941.1-201ENST00000417506 CCDC88BA6NC98 1476 aa13.11□□□□□ -0.31
AC004941.1-201ENST00000417506 EIF4G1Q04637 1599 aaKnown RBP13.11□□□□□ -0.31
AC004941.1-201ENST00000417506 TOP2AP11388 1531 aaKnown RBP13.08□□□□□ -0.32
AC004941.1-201ENST00000417506 BAZ1BQ9UIG0 1483 aaKnown RBP13.07□□□□□ -0.32
AC004941.1-201ENST00000417506 ATAD2BQ9ULI0 1458 aa13.07□□□□□ -0.32
AC004941.1-201ENST00000417506 ABCC8Q09428 1581 aa13.01□□□□□ -0.33
AC004941.1-201ENST00000417506 NCAPD3P42695 1498 aa13□□□□□ -0.33
AC004941.1-201ENST00000417506 PRDM2Q13029 1718 aa12.96□□□□□ -0.34
AC004941.1-201ENST00000417506 CC2D2AQ9P2K1 1620 aa12.93□□□□□ -0.34
AC004941.1-201ENST00000417506 PHF23Q9BUL5 403 aaPredicted RBP12.92□□□□□ -0.34
AC004941.1-201ENST00000417506 RANGAP1P46060 587 aaPredicted RBP12.9□□□□□ -0.34
AC004941.1-201ENST00000417506 DNAJC5BQ9UF47 199 aa12.9□□□□□ -0.34
AC004941.1-201ENST00000417506 PPARGC1BQ86YN6 1023 aaKnown RBP12.86□□□□□ -0.35
AC004941.1-201ENST00000417506 TTBK1Q5TCY1 1321 aaPredicted RBP12.83□□□□□ -0.36
AC004941.1-201ENST00000417506 UBTFP17480 764 aaKnown RBP12.82□□□□□ -0.36
AC004941.1-201ENST00000417506 PCGF6Q9BYE7 350 aa12.82□□□□□ -0.36
AC004941.1-201ENST00000417506 SOGA1O94964 1423 aa12.82□□□□□ -0.36
AC004941.1-201ENST00000417506 WRNQ14191 1432 aaPredicted RBP eCLIP12.81□□□□□ -0.36
AC004941.1-201ENST00000417506 RUSC2Q8N2Y8 1516 aa12.78□□□□□ -0.36
AC004941.1-201ENST00000417506 CSRNP3Q8WYN3 585 aa12.74□□□□□ -0.37
AC004941.1-201ENST00000417506 LAMC3Q9Y6N6 1575 aa12.73□□□□□ -0.37
AC004941.1-201ENST00000417506 SYNJ1O43426 1573 aa12.7□□□□□ -0.38
AC004941.1-201ENST00000417506 NESP48681 1621 aa12.69□□□□□ -0.38
AC004941.1-201ENST00000417506 CADPSQ9ULU8 1353 aa12.66□□□□□ -0.38
AC004941.1-201ENST00000417506 WDR97A6NE52 1622 aa12.66□□□□□ -0.38
AC004941.1-201ENST00000417506 CFTRP13569 1480 aa12.62□□□□□ -0.39
AC004941.1-201ENST00000417506 CUX1P39880 1505 aa12.56□□□□□ -0.4
AC004941.1-201ENST00000417506 FANCD2Q9BXW9 1451 aa12.55□□□□□ -0.4
AC004941.1-201ENST00000417506 CEP162Q5TB80 1403 aa12.51□□□□□ -0.41
AC004941.1-201ENST00000417506 TRIM26Q12899 539 aaPredicted RBP12.51□□□□□ -0.41
AC004941.1-201ENST00000417506 TOP2BQ02880 1626 aa12.5□□□□□ -0.41
AC004941.1-201ENST00000417506 CUX2O14529 1486 aa12.49□□□□□ -0.41
AC004941.1-201ENST00000417506 EEA1Q15075 1411 aa12.49□□□□□ -0.41
AC004941.1-201ENST00000417506 RAPGEF2Q9Y4G8 1499 aa12.49□□□□□ -0.41
AC004941.1-201ENST00000417506 GOLGA3Q08378 1498 aa12.48□□□□□ -0.41
AC004941.1-201ENST00000417506 RAD54L2Q9Y4B4 1467 aa12.47□□□□□ -0.41
AC004941.1-201ENST00000417506 THOC2Q8NI27 1593 aaKnown RBP12.47□□□□□ -0.41
AC004941.1-201ENST00000417506 FGD5Q6ZNL6 1462 aa12.47□□□□□ -0.41
AC004941.1-201ENST00000417506 P3H3Q8IVL6 736 aa12.46□□□□□ -0.42
AC004941.1-201ENST00000417506 KIF27Q86VH2 1401 aa12.46□□□□□ -0.42
AC004941.1-201ENST00000417506 TNIKQ9UKE5 1360 aa12.45□□□□□ -0.42
AC004941.1-201ENST00000417506 ATP1B4Q9UN42 357 aaPredicted RBP12.44□□□□□ -0.42
AC004941.1-201ENST00000417506 CEP164Q9UPV0 1460 aa12.44□□□□□ -0.42
AC004941.1-201ENST00000417506 WDR62O43379 1518 aa12.43□□□□□ -0.42
AC004941.1-201ENST00000417506 TDRD9Q8NDG6 1382 aaKnown RBP12.43□□□□□ -0.42
AC004941.1-201ENST00000417506 APLP2Q06481 763 aa12.42□□□□□ -0.42
AC004941.1-201ENST00000417506 PDS5BQ9NTI5 1447 aa12.41□□□□□ -0.42
AC004941.1-201ENST00000417506 BIVM-ERCC5R4GMW8 1640 aa12.41□□□□□ -0.42
AC004941.1-201ENST00000417506 CLIP1P30622 1438 aa12.4□□□□□ -0.42
AC004941.1-201ENST00000417506 TOPBP1Q92547 1522 aa12.38□□□□□ -0.43
AC004941.1-201ENST00000417506 POLA1P09884 1462 aaPredicted RBP12.36□□□□□ -0.43
AC004941.1-201ENST00000417506 IGF1RP08069 1367 aa12.35□□□□□ -0.43
AC004941.1-201ENST00000417506 CARMIL1Q5VZK9 1371 aa12.35□□□□□ -0.43
AC004941.1-201ENST00000417506 URB2Q14146 1524 aaKnown RBP12.35□□□□□ -0.43
AC004941.1-201ENST00000417506 ERCC6Q03468 1493 aa12.35□□□□□ -0.43
AC004941.1-201ENST00000417506 FBLN2P98095 1184 aa12.33□□□□□ -0.44
AC004941.1-201ENST00000417506 KIF21AQ7Z4S6 1674 aa12.32□□□□□ -0.44
AC004941.1-201ENST00000417506 DNMBPQ6XZF7 1577 aa12.3□□□□□ -0.44
AC004941.1-201ENST00000417506 HRCP23327 699 aa12.3□□□□□ -0.44
AC004941.1-201ENST00000417506 HNRNPUL2Q1KMD3 747 aaKnown RBP12.3□□□□□ -0.44
AC004941.1-201ENST00000417506 KIF21BO75037 1637 aa12.3□□□□□ -0.44
AC004941.1-201ENST00000417506 PRXQ9BXM0 1461 aa12.29□□□□□ -0.44
AC004941.1-201ENST00000417506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.28□□□□□ -0.44
AC004941.1-201ENST00000417506 AQRO60306 1485 aaKnown RBP eCLIP12.27□□□□□ -0.45
AC004941.1-201ENST00000417506 ARID3CA6NKF2 412 aa12.26□□□□□ -0.45
AC004941.1-201ENST00000417506 MRC2Q9UBG0 1479 aa12.26□□□□□ -0.45
AC004941.1-201ENST00000417506 ITGAEP38570 1179 aa12.24□□□□□ -0.45
AC004941.1-201ENST00000417506 KANK4Q5T7N3 995 aaPredicted RBP12.22□□□□□ -0.45
AC004941.1-201ENST00000417506 GAPVD1Q14C86 1478 aa12.21□□□□□ -0.45
AC004941.1-201ENST00000417506 VPS8Q8N3P4 1428 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms