RNA–Protein interactions for RNA: ENST00000417477.2

ARID4A-204, Transcript of AT-rich interaction domain 4A, humanhuman

TSL 1 (best)

Gene ARID4A, Length 2,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID4A-204ENST00000417477 AEBP2Q6ZN18 517 aaPredicted RBP20.99■□□□□ 0.95
ARID4A-204ENST00000417477 CHIC1Q5VXU3 224 aa20.01■□□□□ 0.79
ARID4A-204ENST00000417477 SENP3Q9H4L4 574 aaPredicted RBP17.83■□□□□ 0.44
ARID4A-204ENST00000417477 PHF23Q9BUL5 403 aaPredicted RBP17.64■□□□□ 0.41
ARID4A-204ENST00000417477 FOXD1Q16676 465 aa16.64■□□□□ 0.25
ARID4A-204ENST00000417477 PLPPR3Q6T4P5 718 aa16.05■□□□□ 0.16
ARID4A-204ENST00000417477 PPP6R1Q9UPN7 881 aa15.69■□□□□ 0.1
ARID4A-204ENST00000417477 ADRA2BP18089 450 aa15.63■□□□□ 0.09
ARID4A-204ENST00000417477 PIAS4Q8N2W9 510 aaPredicted RBP15.58■□□□□ 0.08
ARID4A-204ENST00000417477 MSH5O43196 834 aa15.47■□□□□ 0.07
ARID4A-204ENST00000417477 POTEDQ86YR6 584 aa14.92□□□□□ -0.02
ARID4A-204ENST00000417477 MAPK8IP2Q13387 824 aaPredicted RBP14.33□□□□□ -0.12
ARID4A-204ENST00000417477 SCAF1Q9H7N4 1312 aaKnown RBP14.24□□□□□ -0.13
ARID4A-204ENST00000417477 DMRT2Q9Y5R5 561 aa14.16□□□□□ -0.14
ARID4A-204ENST00000417477 PPP4R3CPQ6ZMV5 832 aa14.09□□□□□ -0.15
ARID4A-204ENST00000417477 CNKSR2Q8WXI2 1034 aa13.79□□□□□ -0.2
ARID4A-204ENST00000417477 HOXD11P31277 338 aaPredicted RBP13.69□□□□□ -0.22
ARID4A-204ENST00000417477 RNF216Q9NWF9 866 aaPredicted RBP13.62□□□□□ -0.23
ARID4A-204ENST00000417477 DCAF8L1A6NGE4 600 aa13.61□□□□□ -0.23
ARID4A-204ENST00000417477 NCBP3Q53F19 620 aaKnown RBP13.56□□□□□ -0.24
ARID4A-204ENST00000417477 NPM3O75607 178 aaKnown RBP13.41□□□□□ -0.26
ARID4A-204ENST00000417477 KCNA4P22459 653 aa13.29□□□□□ -0.28
ARID4A-204ENST00000417477 RNF39Q9H2S5 420 aa13.25□□□□□ -0.29
ARID4A-204ENST00000417477 CACNB1Q02641 598 aaPredicted RBP13.22□□□□□ -0.29
ARID4A-204ENST00000417477 DNAJC5BQ9UF47 199 aa13.16□□□□□ -0.3
ARID4A-204ENST00000417477 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.06□□□□□ -0.321e-6■■■□□ 17.3
ARID4A-204ENST00000417477 C1QBPQ07021 282 aaKnown RBP13.04□□□□□ -0.32
ARID4A-204ENST00000417477 U3KPZ7 1027 aaPredicted RBP12.81□□□□□ -0.36
ARID4A-204ENST00000417477 SLC4A2P04920 1241 aa12.78□□□□□ -0.36
ARID4A-204ENST00000417477 SPINK5Q9NQ38 1064 aaPredicted RBP12.61□□□□□ -0.39
ARID4A-204ENST00000417477 CAPN15O75808 1086 aa12.55□□□□□ -0.4
ARID4A-204ENST00000417477 SLC4A1APQ9BWU0 796 aaKnown RBP12.54□□□□□ -0.4
ARID4A-204ENST00000417477 DSG3P32926 999 aa12.45□□□□□ -0.42
ARID4A-204ENST00000417477 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.45□□□□□ -0.42
ARID4A-204ENST00000417477 HNRNPUL2Q1KMD3 747 aaKnown RBP12.45□□□□□ -0.42
ARID4A-204ENST00000417477 TRHP20396 242 aaPredicted RBP12.4□□□□□ -0.42
ARID4A-204ENST00000417477 SAMD1Q6SPF0 538 aaPredicted RBP12.4□□□□□ -0.42
ARID4A-204ENST00000417477 APLP2Q06481 763 aa12.39□□□□□ -0.43
ARID4A-204ENST00000417477 MYCNP04198 464 aaPredicted RBP12.37□□□□□ -0.43
ARID4A-204ENST00000417477 ZNF219Q9P2Y4 722 aaPredicted RBP12.35□□□□□ -0.43
ARID4A-204ENST00000417477 FOXD4L1Q9NU39 408 aa12.32□□□□□ -0.44
ARID4A-204ENST00000417477 ABCB7O75027 752 aa12.3□□□□□ -0.44
ARID4A-204ENST00000417477 ZBTB22O15209 634 aa12.24□□□□□ -0.45
ARID4A-204ENST00000417477 ATF5Q9Y2D1 282 aaPredicted RBP12.13□□□□□ -0.47
ARID4A-204ENST00000417477 POLA2Q14181 598 aa12.09□□□□□ -0.47
ARID4A-204ENST00000417477 ATXN8OSP0DMR3 200 aa11.9□□□□□ -0.5
ARID4A-204ENST00000417477 RBM42Q9BTD8 480 aaKnown RBP11.84□□□□□ -0.51
ARID4A-204ENST00000417477 ZBTB12Q9Y330 459 aaPredicted RBP11.81□□□□□ -0.52
ARID4A-204ENST00000417477 CSRNP3Q8WYN3 585 aa11.77□□□□□ -0.53
ARID4A-204ENST00000417477 POTEHQ6S545 545 aa11.71□□□□□ -0.53
ARID4A-204ENST00000417477 OSCARQ8IYS5 282 aa11.71□□□□□ -0.53
ARID4A-204ENST00000417477 EHMT2Q96KQ7 1210 aa11.71□□□□□ -0.53
ARID4A-204ENST00000417477 AKT1S1Q96B36 256 aa11.6□□□□□ -0.55
ARID4A-204ENST00000417477 FBLN2P98095 1184 aa11.58□□□□□ -0.56
ARID4A-204ENST00000417477 CHRDL2Q6WN34 429 aa11.57□□□□□ -0.56
ARID4A-204ENST00000417477 MKRN4PQ13434 485 aaPredicted RBP11.56□□□□□ -0.56
ARID4A-204ENST00000417477 REM2Q8IYK8 340 aaPredicted RBP11.52□□□□□ -0.56
ARID4A-204ENST00000417477 SPDYE2BA6NHP3 402 aa11.47□□□□□ -0.57
ARID4A-204ENST00000417477 SPDYE6P0CI01 402 aa11.47□□□□□ -0.57
ARID4A-204ENST00000417477 SPDYE2Q495Y8 402 aa11.47□□□□□ -0.57
ARID4A-204ENST00000417477 PITPNM1O00562 1244 aa11.41□□□□□ -0.58
ARID4A-204ENST00000417477 ZNF692Q9BU19 519 aaPredicted RBP11.38□□□□□ -0.59
ARID4A-204ENST00000417477 SSUH2Q9Y2M2 353 aa11.35□□□□□ -0.59
ARID4A-204ENST00000417477 PIP4P2Q8N4L2 257 aa11.32□□□□□ -0.6
ARID4A-204ENST00000417477 FXR2P51116 673 aaKnown RBP eCLIP11.26□□□□□ -0.61
ARID4A-204ENST00000417477 CLEC11AQ9Y240 323 aa11.25□□□□□ -0.61
ARID4A-204ENST00000417477 SPDYE1Q8NFV5 336 aaPredicted RBP11.24□□□□□ -0.61
ARID4A-204ENST00000417477 PABPN1Q86U42 306 aaKnown RBP eCLIP11.22□□□□□ -0.61
ARID4A-204ENST00000417477 PRKAR2AP13861 404 aaKnown RBP11.1□□□□□ -0.63
ARID4A-204ENST00000417477 HAX1O00165 279 aa11.08□□□□□ -0.64
ARID4A-204ENST00000417477 SPDYE4A6NLX3 237 aa11.07□□□□□ -0.64
ARID4A-204ENST00000417477 PRR29P0C7W0 189 aa11.06□□□□□ -0.64
ARID4A-204ENST00000417477 SP7Q8TDD2 431 aaPredicted RBP11.04□□□□□ -0.64
ARID4A-204ENST00000417477 CHADLQ6NUI6 762 aa11.03□□□□□ -0.64
ARID4A-204ENST00000417477 EVX2Q03828 476 aa10.99□□□□□ -0.65
ARID4A-204ENST00000417477 C19orf67A6NJJ6 358 aa10.89□□□□□ -0.67
ARID4A-204ENST00000417477 STAG3Q9UJ98 1225 aa10.89□□□□□ -0.67
ARID4A-204ENST00000417477 FARP1Q9Y4F1 1045 aaPredicted RBP10.86□□□□□ -0.67
ARID4A-204ENST00000417477 CREBZFQ9NS37 354 aa10.82□□□□□ -0.68
ARID4A-204ENST00000417477 PROM2Q8N271 834 aa10.81□□□□□ -0.68
ARID4A-204ENST00000417477 CD44P16070 742 aaKnown RBP10.76□□□□□ -0.69
ARID4A-204ENST00000417477 GABBR2O75899 941 aa10.71□□□□□ -0.69
ARID4A-204ENST00000417477 MNX1P50219 401 aaPredicted RBP10.67□□□□□ -0.7
ARID4A-204ENST00000417477 FKBP8Q14318 412 aa10.66□□□□□ -0.7
ARID4A-204ENST00000417477 ZRANB1Q9UGI0 708 aa10.62□□□□□ -0.71
ARID4A-204ENST00000417477 NPM1P06748 294 aaKnown RBP eCLIP10.59□□□□□ -0.71
ARID4A-204ENST00000417477 ZNF579Q8NAF0 562 aaKnown RBP10.58□□□□□ -0.72
ARID4A-204ENST00000417477 MIER1Q8N108 512 aa10.54□□□□□ -0.72
ARID4A-204ENST00000417477 PAK3O75914 559 aaPredicted RBP10.54□□□□□ -0.72
ARID4A-204ENST00000417477 CLCN6P51797 869 aa10.53□□□□□ -0.72
ARID4A-204ENST00000417477 PHF12Q96QT6 1004 aa10.51□□□□□ -0.73
ARID4A-204ENST00000417477 POTEIP0CG38 1075 aa10.5□□□□□ -0.73
ARID4A-204ENST00000417477 PLEKHG5O94827 1062 aa10.49□□□□□ -0.73
ARID4A-204ENST00000417477 GALR2O43603 387 aaPredicted RBP10.48□□□□□ -0.73
ARID4A-204ENST00000417477 PLCD3Q8N3E9 789 aa10.48□□□□□ -0.73
ARID4A-204ENST00000417477 TSPYL2Q9H2G4 693 aaPredicted RBP10.46□□□□□ -0.74
ARID4A-204ENST00000417477 DCBLD2Q96PD2 775 aa10.45□□□□□ -0.74
ARID4A-204ENST00000417477 RASEFQ8IZ41 740 aa10.4□□□□□ -0.74
ARID4A-204ENST00000417477 CCDC61Q9Y6R9 512 aa10.4□□□□□ -0.75
ARID4A-204ENST00000417477 MS4A3Q96HJ5 214 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms