RNA–Protein interactions for RNA: ENST00000416942.2

GTF3AP1-201, Transcript of general transcription factor IIIA pseudogene 1, humanhuman

BASIC

Gene GTF3AP1, Length 1,004 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3AP1-201ENST00000416942 AEBP2Q6ZN18 517 aaPredicted RBP30.24■■■□□ 2.43
GTF3AP1-201ENST00000416942 CHIC1Q5VXU3 224 aa29.54■■■□□ 2.32
GTF3AP1-201ENST00000416942 PHF23Q9BUL5 403 aaPredicted RBP25.98■■□□□ 1.75
GTF3AP1-201ENST00000416942 SENP3Q9H4L4 574 aaPredicted RBP25.65■■□□□ 1.7
GTF3AP1-201ENST00000416942 PLPPR3Q6T4P5 718 aa23.99■■□□□ 1.43
GTF3AP1-201ENST00000416942 FOXD1Q16676 465 aa23.81■■□□□ 1.4
GTF3AP1-201ENST00000416942 PPP6R1Q9UPN7 881 aa22.92■■□□□ 1.26
GTF3AP1-201ENST00000416942 ADRA2BP18089 450 aa22.9■■□□□ 1.26
GTF3AP1-201ENST00000416942 PIAS4Q8N2W9 510 aaPredicted RBP22.46■■□□□ 1.19
GTF3AP1-201ENST00000416942 MSH5O43196 834 aa21.95■■□□□ 1.1
GTF3AP1-201ENST00000416942 PPP4R3CPQ6ZMV5 832 aa21.14■□□□□ 0.97
GTF3AP1-201ENST00000416942 SCAF1Q9H7N4 1312 aaKnown RBP20.94■□□□□ 0.94
GTF3AP1-201ENST00000416942 MAPK8IP2Q13387 824 aaPredicted RBP20.77■□□□□ 0.92
GTF3AP1-201ENST00000416942 KCNA4P22459 653 aa20.66■□□□□ 0.9
GTF3AP1-201ENST00000416942 NCBP3Q53F19 620 aaKnown RBP20.58■□□□□ 0.89
GTF3AP1-201ENST00000416942 CNKSR2Q8WXI2 1034 aa20.55■□□□□ 0.88
GTF3AP1-201ENST00000416942 DMRT2Q9Y5R5 561 aa20.48■□□□□ 0.87
GTF3AP1-201ENST00000416942 NPM3O75607 178 aaKnown RBP20.29■□□□□ 0.84
GTF3AP1-201ENST00000416942 RNF216Q9NWF9 866 aaPredicted RBP20.14■□□□□ 0.81
GTF3AP1-201ENST00000416942 HOXD11P31277 338 aaPredicted RBP20.06■□□□□ 0.8
GTF3AP1-201ENST00000416942 POTEDQ86YR6 584 aa19.97■□□□□ 0.79
GTF3AP1-201ENST00000416942 DNAJC5BQ9UF47 199 aa19.69■□□□□ 0.74
GTF3AP1-201ENST00000416942 SLC4A1APQ9BWU0 796 aaKnown RBP19.68■□□□□ 0.74
GTF3AP1-201ENST00000416942 DCAF8L1A6NGE4 600 aa19.6■□□□□ 0.73
GTF3AP1-201ENST00000416942 SLC4A2P04920 1241 aa19.16■□□□□ 0.66
GTF3AP1-201ENST00000416942 EHMT2Q96KQ7 1210 aa19.13■□□□□ 0.65
GTF3AP1-201ENST00000416942 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.11■□□□□ 0.65
GTF3AP1-201ENST00000416942 FOXD4L1Q9NU39 408 aa19.02■□□□□ 0.64
GTF3AP1-201ENST00000416942 ZBTB22O15209 634 aa19.01■□□□□ 0.63
GTF3AP1-201ENST00000416942 CSRNP3Q8WYN3 585 aa18.91■□□□□ 0.62
GTF3AP1-201ENST00000416942 U3KPZ7 1027 aaPredicted RBP18.82■□□□□ 0.6
GTF3AP1-201ENST00000416942 RNF39Q9H2S5 420 aa18.81■□□□□ 0.6
GTF3AP1-201ENST00000416942 MYCNP04198 464 aaPredicted RBP18.75■□□□□ 0.59
GTF3AP1-201ENST00000416942 C1QBPQ07021 282 aaKnown RBP18.58■□□□□ 0.56
GTF3AP1-201ENST00000416942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.57■□□□□ 0.56
GTF3AP1-201ENST00000416942 HNRNPUL2Q1KMD3 747 aaKnown RBP18.57■□□□□ 0.56
GTF3AP1-201ENST00000416942 SAMD1Q6SPF0 538 aaPredicted RBP18.51■□□□□ 0.55
GTF3AP1-201ENST00000416942 APLP2Q06481 763 aa18.37■□□□□ 0.53
GTF3AP1-201ENST00000416942 ATXN8OSP0DMR3 200 aa18.34■□□□□ 0.53
GTF3AP1-201ENST00000416942 CACNB1Q02641 598 aaPredicted RBP18.31■□□□□ 0.52
GTF3AP1-201ENST00000416942 SPINK5Q9NQ38 1064 aaPredicted RBP18.29■□□□□ 0.52
GTF3AP1-201ENST00000416942 ATF5Q9Y2D1 282 aaPredicted RBP18.25■□□□□ 0.51
GTF3AP1-201ENST00000416942 CAPN15O75808 1086 aa18.21■□□□□ 0.51
GTF3AP1-201ENST00000416942 TRHP20396 242 aaPredicted RBP18.13■□□□□ 0.49
GTF3AP1-201ENST00000416942 ZNF219Q9P2Y4 722 aaPredicted RBP18.12■□□□□ 0.49
GTF3AP1-201ENST00000416942 DSG3P32926 999 aa17.91■□□□□ 0.46
GTF3AP1-201ENST00000416942 ABCB7O75027 752 aa17.86■□□□□ 0.45
GTF3AP1-201ENST00000416942 POLA2Q14181 598 aa17.84■□□□□ 0.45
GTF3AP1-201ENST00000416942 ZBTB12Q9Y330 459 aaPredicted RBP17.53■□□□□ 0.4
GTF3AP1-201ENST00000416942 FBLN2P98095 1184 aa17.47■□□□□ 0.39
GTF3AP1-201ENST00000416942 MKRN4PQ13434 485 aaPredicted RBP17.46■□□□□ 0.39
GTF3AP1-201ENST00000416942 OSCARQ8IYS5 282 aa17.23■□□□□ 0.35
GTF3AP1-201ENST00000416942 FKBP8Q14318 412 aa17.1■□□□□ 0.33
GTF3AP1-201ENST00000416942 SPDYE2BA6NHP3 402 aa17.07■□□□□ 0.32
GTF3AP1-201ENST00000416942 SPDYE4A6NLX3 237 aa17.07■□□□□ 0.32
GTF3AP1-201ENST00000416942 SPDYE6P0CI01 402 aa17.07■□□□□ 0.32
GTF3AP1-201ENST00000416942 SPDYE2Q495Y8 402 aa17.07■□□□□ 0.32
GTF3AP1-201ENST00000416942 RBM42Q9BTD8 480 aaKnown RBP17.06■□□□□ 0.32
GTF3AP1-201ENST00000416942 ZNF692Q9BU19 519 aaPredicted RBP17■□□□□ 0.31
GTF3AP1-201ENST00000416942 SSUH2Q9Y2M2 353 aa16.94■□□□□ 0.3
GTF3AP1-201ENST00000416942 AKT1S1Q96B36 256 aa16.85■□□□□ 0.29
GTF3AP1-201ENST00000416942 PABPN1Q86U42 306 aaKnown RBP eCLIP16.79■□□□□ 0.28
GTF3AP1-201ENST00000416942 PROM2Q8N271 834 aa16.78■□□□□ 0.28
GTF3AP1-201ENST00000416942 REM2Q8IYK8 340 aaPredicted RBP16.69■□□□□ 0.26
GTF3AP1-201ENST00000416942 SPDYE1Q8NFV5 336 aaPredicted RBP16.56■□□□□ 0.24
GTF3AP1-201ENST00000416942 PITPNM1O00562 1244 aa16.5■□□□□ 0.23
GTF3AP1-201ENST00000416942 STAG3Q9UJ98 1225 aa16.5■□□□□ 0.23
GTF3AP1-201ENST00000416942 CLEC11AQ9Y240 323 aa16.5■□□□□ 0.23
GTF3AP1-201ENST00000416942 FBXO3Q9UK99 471 aa16.48■□□□□ 0.23
GTF3AP1-201ENST00000416942 PRR29P0C7W0 189 aa16.35■□□□□ 0.21
GTF3AP1-201ENST00000416942 CHRDL2Q6WN34 429 aa16.35■□□□□ 0.21
GTF3AP1-201ENST00000416942 VASPP50552 380 aaPredicted RBP16.26■□□□□ 0.19
GTF3AP1-201ENST00000416942 FXR2P51116 673 aaKnown RBP eCLIP16.19■□□□□ 0.18
GTF3AP1-201ENST00000416942 MIER1Q8N108 512 aa16.18■□□□□ 0.18
GTF3AP1-201ENST00000416942 PLCD3Q8N3E9 789 aa16.16■□□□□ 0.18
GTF3AP1-201ENST00000416942 PIP4P2Q8N4L2 257 aa16.14■□□□□ 0.17
GTF3AP1-201ENST00000416942 CREBZFQ9NS37 354 aa16.14■□□□□ 0.17
GTF3AP1-201ENST00000416942 PLEKHG5O94827 1062 aa16.09■□□□□ 0.17
GTF3AP1-201ENST00000416942 PRKAR2AP13861 404 aaKnown RBP16.09■□□□□ 0.17
GTF3AP1-201ENST00000416942 CHADLQ6NUI6 762 aa16.09■□□□□ 0.17
GTF3AP1-201ENST00000416942 IFNLR1Q8IU57 520 aaPredicted RBP16.04■□□□□ 0.16
GTF3AP1-201ENST00000416942 KLHL34Q8N239 644 aa15.98■□□□□ 0.15
GTF3AP1-201ENST00000416942 ZBTB47Q9UFB7 747 aaPredicted RBP15.98■□□□□ 0.15
GTF3AP1-201ENST00000416942 MNX1P50219 401 aaPredicted RBP15.97■□□□□ 0.15
GTF3AP1-201ENST00000416942 FARP1Q9Y4F1 1045 aaPredicted RBP15.94■□□□□ 0.14
GTF3AP1-201ENST00000416942 NPM1P06748 294 aaKnown RBP eCLIP15.86■□□□□ 0.13
GTF3AP1-201ENST00000416942 SPOCK2Q92563 424 aa15.84■□□□□ 0.13
GTF3AP1-201ENST00000416942 POTEHQ6S545 545 aa15.82■□□□□ 0.12
GTF3AP1-201ENST00000416942 NUBP1P53384 320 aa15.77■□□□□ 0.12
GTF3AP1-201ENST00000416942 RASEFQ8IZ41 740 aa15.71■□□□□ 0.11
GTF3AP1-201ENST00000416942 C19orf67A6NJJ6 358 aa15.64■□□□□ 0.09
GTF3AP1-201ENST00000416942 FAM212AQ96EL1 285 aa15.64■□□□□ 0.09
GTF3AP1-201ENST00000416942 CD44P16070 742 aaKnown RBP15.63■□□□□ 0.09
GTF3AP1-201ENST00000416942 HAX1O00165 279 aa15.62■□□□□ 0.09
GTF3AP1-201ENST00000416942 DCAF8Q5TAQ9 597 aa15.62■□□□□ 0.09
GTF3AP1-201ENST00000416942 TSPYL2Q9H2G4 693 aaPredicted RBP15.62■□□□□ 0.09
GTF3AP1-201ENST00000416942 PAK3O75914 559 aaPredicted RBP15.6■□□□□ 0.09
GTF3AP1-201ENST00000416942 GSE1Q14687 1217 aa15.6■□□□□ 0.09
GTF3AP1-201ENST00000416942 CIZ1Q9ULV3 898 aaPredicted RBP15.6■□□□□ 0.09
GTF3AP1-201ENST00000416942 AMER1Q5JTC6 1135 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms