RNA–Protein interactions for RNA: ENST00000416593.1

AC004012.1-201, humanhuman

TSL 4 BASIC

Gene AC004012.1, Length 534 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004012.1-201ENST00000416593 AEBP2Q6ZN18 517 aaPredicted RBP25.95■■□□□ 1.74
AC004012.1-201ENST00000416593 CHIC1Q5VXU3 224 aa25.3■■□□□ 1.64
AC004012.1-201ENST00000416593 PHF23Q9BUL5 403 aaPredicted RBP22.32■■□□□ 1.16
AC004012.1-201ENST00000416593 SENP3Q9H4L4 574 aaPredicted RBP21.9■■□□□ 1.1
AC004012.1-201ENST00000416593 PLPPR3Q6T4P5 718 aa20.52■□□□□ 0.88
AC004012.1-201ENST00000416593 FOXD1Q16676 465 aa20.4■□□□□ 0.86
AC004012.1-201ENST00000416593 PPP6R1Q9UPN7 881 aa19.69■□□□□ 0.74
AC004012.1-201ENST00000416593 ADRA2BP18089 450 aa19.66■□□□□ 0.74
AC004012.1-201ENST00000416593 PIAS4Q8N2W9 510 aaPredicted RBP19.21■□□□□ 0.67
AC004012.1-201ENST00000416593 MSH5O43196 834 aa18.7■□□□□ 0.58
AC004012.1-201ENST00000416593 PPP4R3CPQ6ZMV5 832 aa18.13■□□□□ 0.49
AC004012.1-201ENST00000416593 MAPK8IP2Q13387 824 aaPredicted RBP17.85■□□□□ 0.45
AC004012.1-201ENST00000416593 SCAF1Q9H7N4 1312 aaKnown RBP17.84■□□□□ 0.45
AC004012.1-201ENST00000416593 KCNA4P22459 653 aa17.79■□□□□ 0.44
AC004012.1-201ENST00000416593 NCBP3Q53F19 620 aaKnown RBP17.57■□□□□ 0.4
AC004012.1-201ENST00000416593 CNKSR2Q8WXI2 1034 aa17.57■□□□□ 0.4
AC004012.1-201ENST00000416593 DMRT2Q9Y5R5 561 aa17.52■□□□□ 0.4
AC004012.1-201ENST00000416593 NPM3O75607 178 aaKnown RBP17.43■□□□□ 0.38
AC004012.1-201ENST00000416593 RNF216Q9NWF9 866 aaPredicted RBP17.22■□□□□ 0.35
AC004012.1-201ENST00000416593 HOXD11P31277 338 aaPredicted RBP17.16■□□□□ 0.34
AC004012.1-201ENST00000416593 POTEDQ86YR6 584 aa17.06■□□□□ 0.32
AC004012.1-201ENST00000416593 SLC4A1APQ9BWU0 796 aaKnown RBP16.89■□□□□ 0.29
AC004012.1-201ENST00000416593 NISCHQ9Y2I1 1504 aa16.82■□□□□ 0.28
AC004012.1-201ENST00000416593 DNAJC5BQ9UF47 199 aa16.82■□□□□ 0.28
AC004012.1-201ENST00000416593 DCAF8L1A6NGE4 600 aa16.76■□□□□ 0.27
AC004012.1-201ENST00000416593 EHMT2Q96KQ7 1210 aa16.51■□□□□ 0.23
AC004012.1-201ENST00000416593 SLC4A2P04920 1241 aa16.47■□□□□ 0.23
AC004012.1-201ENST00000416593 ZBTB22O15209 634 aa16.41■□□□□ 0.22
AC004012.1-201ENST00000416593 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.34■□□□□ 0.21
AC004012.1-201ENST00000416593 CSRNP3Q8WYN3 585 aa16.3■□□□□ 0.2
AC004012.1-201ENST00000416593 FOXD4L1Q9NU39 408 aa16.3■□□□□ 0.2
AC004012.1-201ENST00000416593 U3KPZ7 1027 aaPredicted RBP16.14■□□□□ 0.17
AC004012.1-201ENST00000416593 RNF39Q9H2S5 420 aa16.08■□□□□ 0.16
AC004012.1-201ENST00000416593 MYCNP04198 464 aaPredicted RBP16.05■□□□□ 0.16
AC004012.1-201ENST00000416593 C1QBPQ07021 282 aaKnown RBP15.84■□□□□ 0.13
AC004012.1-201ENST00000416593 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.82■□□□□ 0.12
AC004012.1-201ENST00000416593 HNRNPUL2Q1KMD3 747 aaKnown RBP15.82■□□□□ 0.12
AC004012.1-201ENST00000416593 SAMD1Q6SPF0 538 aaPredicted RBP15.79■□□□□ 0.12
AC004012.1-201ENST00000416593 ATF5Q9Y2D1 282 aaPredicted RBP15.72■□□□□ 0.11
AC004012.1-201ENST00000416593 SPINK5Q9NQ38 1064 aaPredicted RBP15.7■□□□□ 0.1
AC004012.1-201ENST00000416593 ATXN8OSP0DMR3 200 aa15.68■□□□□ 0.1
AC004012.1-201ENST00000416593 APLP2Q06481 763 aa15.62■□□□□ 0.09
AC004012.1-201ENST00000416593 CACNB1Q02641 598 aaPredicted RBP15.61■□□□□ 0.09
AC004012.1-201ENST00000416593 CAPN15O75808 1086 aa15.58■□□□□ 0.08
AC004012.1-201ENST00000416593 TRHP20396 242 aaPredicted RBP15.53■□□□□ 0.08
AC004012.1-201ENST00000416593 ZNF219Q9P2Y4 722 aaPredicted RBP15.46■□□□□ 0.07
AC004012.1-201ENST00000416593 ABCB7O75027 752 aa15.34■□□□□ 0.05
AC004012.1-201ENST00000416593 DSG3P32926 999 aa15.33■□□□□ 0.04
AC004012.1-201ENST00000416593 POLA2Q14181 598 aa15.28■□□□□ 0.04
AC004012.1-201ENST00000416593 ABCC9O60706 1549 aa15.27■□□□□ 0.03
AC004012.1-201ENST00000416593 CCDC180Q9P1Z9 1646 aa15.25■□□□□ 0.03
AC004012.1-201ENST00000416593 MKRN4PQ13434 485 aaPredicted RBP15.02■□□□□ -0
AC004012.1-201ENST00000416593 ZBTB12Q9Y330 459 aaPredicted RBP14.94□□□□□ -0.02
AC004012.1-201ENST00000416593 FBLN2P98095 1184 aa14.92□□□□□ -0.02
AC004012.1-201ENST00000416593 OSCARQ8IYS5 282 aa14.79□□□□□ -0.04
AC004012.1-201ENST00000416593 FKBP8Q14318 412 aa14.71□□□□□ -0.05
AC004012.1-201ENST00000416593 SPDYE4A6NLX3 237 aa14.64□□□□□ -0.07
AC004012.1-201ENST00000416593 SPDYE2BA6NHP3 402 aa14.58□□□□□ -0.08
AC004012.1-201ENST00000416593 SPDYE6P0CI01 402 aa14.58□□□□□ -0.08
AC004012.1-201ENST00000416593 SPDYE2Q495Y8 402 aa14.58□□□□□ -0.08
AC004012.1-201ENST00000416593 ZNF692Q9BU19 519 aaPredicted RBP14.55□□□□□ -0.08
AC004012.1-201ENST00000416593 RB1CC1Q8TDY2 1594 aa14.54□□□□□ -0.08
AC004012.1-201ENST00000416593 RBM42Q9BTD8 480 aaKnown RBP14.51□□□□□ -0.09
AC004012.1-201ENST00000416593 SSUH2Q9Y2M2 353 aa14.51□□□□□ -0.09
AC004012.1-201ENST00000416593 PROM2Q8N271 834 aa14.41□□□□□ -0.1
AC004012.1-201ENST00000416593 NACADO15069 1562 aa14.41□□□□□ -0.1
AC004012.1-201ENST00000416593 PABPN1Q86U42 306 aaKnown RBP eCLIP14.38□□□□□ -0.11
AC004012.1-201ENST00000416593 AKT1S1Q96B36 256 aa14.38□□□□□ -0.11
AC004012.1-201ENST00000416593 REM2Q8IYK8 340 aaPredicted RBP14.28□□□□□ -0.12
AC004012.1-201ENST00000416593 UNC13AQ9UPW8 1703 aa14.24□□□□□ -0.13
AC004012.1-201ENST00000416593 MYO15BQ96JP2 1530 aa14.19□□□□□ -0.14
AC004012.1-201ENST00000416593 PITPNM1O00562 1244 aa14.15□□□□□ -0.14
AC004012.1-201ENST00000416593 SPDYE1Q8NFV5 336 aaPredicted RBP14.14□□□□□ -0.15
AC004012.1-201ENST00000416593 DCAF8L2P0C7V8 631 aa14.13□□□□□ -0.15
AC004012.1-201ENST00000416593 CLEC11AQ9Y240 323 aa14.11□□□□□ -0.15
AC004012.1-201ENST00000416593 BICRAQ9NZM4 1560 aa14.1□□□□□ -0.15
AC004012.1-201ENST00000416593 FBXO3Q9UK99 471 aa14.08□□□□□ -0.16
AC004012.1-201ENST00000416593 STAG3Q9UJ98 1225 aa14.06□□□□□ -0.16
AC004012.1-201ENST00000416593 VASPP50552 380 aaPredicted RBP13.97□□□□□ -0.17
AC004012.1-201ENST00000416593 SHROOM4Q9ULL8 1493 aa13.97□□□□□ -0.17
AC004012.1-201ENST00000416593 PRR29P0C7W0 189 aa13.96□□□□□ -0.17
AC004012.1-201ENST00000416593 CHRDL2Q6WN34 429 aa13.96□□□□□ -0.17
AC004012.1-201ENST00000416593 DCAF1Q9Y4B6 1507 aa13.94□□□□□ -0.18
AC004012.1-201ENST00000416593 ZCCHC6Q5VYS8 1495 aaKnown RBP13.93□□□□□ -0.18
AC004012.1-201ENST00000416593 MIER1Q8N108 512 aa13.86□□□□□ -0.19
AC004012.1-201ENST00000416593 FXR2P51116 673 aaKnown RBP eCLIP13.85□□□□□ -0.19
AC004012.1-201ENST00000416593 CREBZFQ9NS37 354 aa13.85□□□□□ -0.19
AC004012.1-201ENST00000416593 CC2D2AQ9P2K1 1620 aa13.83□□□□□ -0.2
AC004012.1-201ENST00000416593 PLCD3Q8N3E9 789 aa13.83□□□□□ -0.2
AC004012.1-201ENST00000416593 PIP4P2Q8N4L2 257 aa13.83□□□□□ -0.2
AC004012.1-201ENST00000416593 CHADLQ6NUI6 762 aa13.82□□□□□ -0.2
AC004012.1-201ENST00000416593 IFNLR1Q8IU57 520 aaPredicted RBP13.81□□□□□ -0.2
AC004012.1-201ENST00000416593 CECR2Q9BXF3 1484 aa13.8□□□□□ -0.2
AC004012.1-201ENST00000416593 SCRIBQ14160 1630 aa13.79□□□□□ -0.2
AC004012.1-201ENST00000416593 PRKAR2AP13861 404 aaKnown RBP13.77□□□□□ -0.21
AC004012.1-201ENST00000416593 EIF4G1Q04637 1599 aaKnown RBP13.77□□□□□ -0.21
AC004012.1-201ENST00000416593 MNX1P50219 401 aaPredicted RBP13.72□□□□□ -0.21
AC004012.1-201ENST00000416593 PLEKHG5O94827 1062 aa13.7□□□□□ -0.22
AC004012.1-201ENST00000416593 KLHL34Q8N239 644 aa13.69□□□□□ -0.22
AC004012.1-201ENST00000416593 FARP1Q9Y4F1 1045 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms