RNA–Protein interactions for RNA: ENST00000416247.3

SMIM13-202, Transcript of small integral membrane protein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM13, Length 4,688 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM13-202ENST00000416247 DCAF8L2P0C7V8 631 aa28.69■■■□□ 2.18
SMIM13-202ENST00000416247 NISCHQ9Y2I1 1504 aa28.02■■■□□ 2.08
SMIM13-202ENST00000416247 SUPT5HO00267 1087 aaKnown RBP27.29■■□□□ 1.96
SMIM13-202ENST00000416247 SHROOM4Q9ULL8 1493 aa26.98■■□□□ 1.91
SMIM13-202ENST00000416247 EHMT2Q96KQ7 1210 aa26.28■■□□□ 1.8
SMIM13-202ENST00000416247 FAM9AQ8IZU1 332 aaPredicted RBP25.71■■□□□ 1.71
SMIM13-202ENST00000416247 APLP2Q06481 763 aa25.46■■□□□ 1.67
SMIM13-202ENST00000416247 TTBK1Q5TCY1 1321 aaPredicted RBP25.34■■□□□ 1.65
SMIM13-202ENST00000416247 PCGF6Q9BYE7 350 aa25.28■■□□□ 1.64
SMIM13-202ENST00000416247 TRIM41Q8WV44 630 aa25.22■■□□□ 1.63
SMIM13-202ENST00000416247 RANGAP1P46060 587 aaPredicted RBP25.13■■□□□ 1.61
SMIM13-202ENST00000416247 UBTFP17480 764 aaKnown RBP24.85■■□□□ 1.57
SMIM13-202ENST00000416247 ATP1B4Q9UN42 357 aaPredicted RBP24.77■■□□□ 1.56
SMIM13-202ENST00000416247 CCER1Q8TC90 406 aaPredicted RBP24.69■■□□□ 1.54
SMIM13-202ENST00000416247 PELP1Q8IZL8 1130 aaKnown RBP24.64■■□□□ 1.54
SMIM13-202ENST00000416247 PPARGC1BQ86YN6 1023 aaKnown RBP24.56■■□□□ 1.52
SMIM13-202ENST00000416247 ZEB1P37275 1124 aaPredicted RBP24.52■■□□□ 1.52
SMIM13-202ENST00000416247 CHIC1Q5VXU3 224 aa24.39■■□□□ 1.5
SMIM13-202ENST00000416247 LOC105371045A0A1W2PR82 267 aa24.36■■□□□ 1.49
SMIM13-202ENST00000416247 CENPBP07199 599 aaPredicted RBP24.25■■□□□ 1.47
SMIM13-202ENST00000416247 TRIM26Q12899 539 aaPredicted RBP24.2■■□□□ 1.46
SMIM13-202ENST00000416247 ABCC9O60706 1549 aa24.14■■□□□ 1.46
SMIM13-202ENST00000416247 ITGAEP38570 1179 aa24.04■■□□□ 1.44
SMIM13-202ENST00000416247 PABPN1Q86U42 306 aaKnown RBP eCLIP24.04■■□□□ 1.44
SMIM13-202ENST00000416247 YTHDC1Q96MU7 727 aaKnown RBP24.01■■□□□ 1.43
SMIM13-202ENST00000416247 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.93■■□□□ 1.42
SMIM13-202ENST00000416247 HNRNPUL2Q1KMD3 747 aaKnown RBP23.93■■□□□ 1.42
SMIM13-202ENST00000416247 HRCP23327 699 aa23.9■■□□□ 1.42
SMIM13-202ENST00000416247 NEFLP07196 543 aa23.71■■□□□ 1.39
SMIM13-202ENST00000416247 MYT1LQ9UL68 1186 aa23.67■■□□□ 1.38
SMIM13-202ENST00000416247 ERICH6Q7L0X2 663 aa23.64■■□□□ 1.37
SMIM13-202ENST00000416247 POLR3GLQ9BT43 218 aa23.58■■□□□ 1.37
SMIM13-202ENST00000416247 CNGB1Q14028 1251 aaPredicted RBP23.45■■□□□ 1.35
SMIM13-202ENST00000416247 FAM50AQ14320 339 aaKnown RBP23.42■■□□□ 1.34
SMIM13-202ENST00000416247 DIEXFQ68CQ4 756 aaKnown RBP23.24■■□□□ 1.31
SMIM13-202ENST00000416247 CSRNP3Q8WYN3 585 aa23.21■■□□□ 1.31
SMIM13-202ENST00000416247 TRIM52Q96A61 297 aa23.2■■□□□ 1.3
SMIM13-202ENST00000416247 FBLN2P98095 1184 aa23.19■■□□□ 1.3
SMIM13-202ENST00000416247 ZCCHC6Q5VYS8 1495 aaKnown RBP23.19■■□□□ 1.3
SMIM13-202ENST00000416247 NEUROD1Q13562 356 aa23.17■■□□□ 1.3
SMIM13-202ENST00000416247 SCRIBQ14160 1630 aa23.14■■□□□ 1.29
SMIM13-202ENST00000416247 P3H3Q8IVL6 736 aa23.12■■□□□ 1.29
SMIM13-202ENST00000416247 SLC4A1APQ9BWU0 796 aaKnown RBP23.04■■□□□ 1.28
SMIM13-202ENST00000416247 ARID3CA6NKF2 412 aa23.02■■□□□ 1.28
SMIM13-202ENST00000416247 ZNF326Q5BKZ1 582 aaKnown RBP22.94■■□□□ 1.26
SMIM13-202ENST00000416247 DAXXQ9UER7 740 aaPredicted RBP22.82■■□□□ 1.24
SMIM13-202ENST00000416247 ZNF316A6NFI3 1004 aaPredicted RBP22.77■■□□□ 1.24
SMIM13-202ENST00000416247 CCDC180Q9P1Z9 1646 aa22.76■■□□□ 1.23
SMIM13-202ENST00000416247 ZNF777Q9ULD5 760 aaPredicted RBP22.74■■□□□ 1.23
SMIM13-202ENST00000416247 ANP32CO43423 234 aa22.73■■□□□ 1.23
SMIM13-202ENST00000416247 BCANQ96GW7 911 aa22.64■■□□□ 1.22
SMIM13-202ENST00000416247 GTF3C3Q9Y5Q9 886 aa22.64■■□□□ 1.21
SMIM13-202ENST00000416247 CDK11AQ9UQ88 783 aaPredicted RBP22.63■■□□□ 1.21
SMIM13-202ENST00000416247 CLSPNQ9HAW4 1339 aa22.59■■□□□ 1.21
SMIM13-202ENST00000416247 MYT1Q01538 1121 aa22.55■■□□□ 1.2
SMIM13-202ENST00000416247 DCAF1Q9Y4B6 1507 aa22.53■■□□□ 1.2
SMIM13-202ENST00000416247 RSF1Q96T23 1441 aaPredicted RBP22.53■■□□□ 1.2
SMIM13-202ENST00000416247 RB1CC1Q8TDY2 1594 aa22.42■■□□□ 1.18
SMIM13-202ENST00000416247 CHIC2Q9UKJ5 165 aa22.42■■□□□ 1.18
SMIM13-202ENST00000416247 TONSLQ96HA7 1378 aa22.4■■□□□ 1.18
SMIM13-202ENST00000416247 MYO15BQ96JP2 1530 aa22.36■■□□□ 1.17
SMIM13-202ENST00000416247 CLIP1P30622 1438 aa22.35■■□□□ 1.17
SMIM13-202ENST00000416247 ACIN1Q9UKV3 1341 aaKnown RBP22.35■■□□□ 1.17
SMIM13-202ENST00000416247 DDX10Q13206 875 aaKnown RBP22.3■■□□□ 1.16
SMIM13-202ENST00000416247 MTUS2Q5JR59 1369 aa22.29■■□□□ 1.16
SMIM13-202ENST00000416247 RTL5Q5HYW3 569 aaPredicted RBP22.28■■□□□ 1.16
SMIM13-202ENST00000416247 CHGAP10645 457 aaKnown RBP22.27■■□□□ 1.16
SMIM13-202ENST00000416247 CHMP7Q8WUX9 453 aaPredicted RBP22.27■■□□□ 1.16
SMIM13-202ENST00000416247 NACADO15069 1562 aa22.25■■□□□ 1.15
SMIM13-202ENST00000416247 NPM1P06748 294 aaKnown RBP eCLIP22.24■■□□□ 1.15
SMIM13-202ENST00000416247 WRNQ14191 1432 aaPredicted RBP eCLIP22.23■■□□□ 1.15
SMIM13-202ENST00000416247 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.22■■□□□ 1.15
SMIM13-202ENST00000416247 CANXP27824 592 aaKnown RBP22.19■■□□□ 1.14
SMIM13-202ENST00000416247 BCL11AQ9H165 835 aa22.19■■□□□ 1.14
SMIM13-202ENST00000416247 TSPY4P0CV99 314 aa22.19■■□□□ 1.14
SMIM13-202ENST00000416247 TSPY10P0CW01 314 aa22.19■■□□□ 1.14
SMIM13-202ENST00000416247 CEP162Q5TB80 1403 aa22.19■■□□□ 1.14
SMIM13-202ENST00000416247 SLC24A1O60721 1099 aa22.18■■□□□ 1.14
SMIM13-202ENST00000416247 BAZ1BQ9UIG0 1483 aaKnown RBP22.17■■□□□ 1.14
SMIM13-202ENST00000416247 EEA1Q15075 1411 aa22.16■■□□□ 1.14
SMIM13-202ENST00000416247 ESF1Q9H501 851 aaKnown RBP22.16■■□□□ 1.14
SMIM13-202ENST00000416247 NEFMP07197 916 aa22.16■■□□□ 1.14
SMIM13-202ENST00000416247 CECR2Q9BXF3 1484 aa22.14■■□□□ 1.14
SMIM13-202ENST00000416247 HNRNPUQ00839 825 aaKnown RBP eCLIP22.13■■□□□ 1.13
SMIM13-202ENST00000416247 GOLGA3Q08378 1498 aa22.13■■□□□ 1.13
SMIM13-202ENST00000416247 ZBTB47Q9UFB7 747 aaPredicted RBP22.12■■□□□ 1.13
SMIM13-202ENST00000416247 FAM9BQ8IZU0 186 aa22.12■■□□□ 1.13
SMIM13-202ENST00000416247 HIRIP3Q9BW71 556 aaPredicted RBP22.11■■□□□ 1.13
SMIM13-202ENST00000416247 STAG3Q9UJ98 1225 aa22.11■■□□□ 1.13
SMIM13-202ENST00000416247 RRP7BPQ9NSQ0 103 aa22.1■■□□□ 1.13
SMIM13-202ENST00000416247 KDM2AQ9Y2K7 1162 aa22.09■■□□□ 1.13
SMIM13-202ENST00000416247 PLPPR3Q6T4P5 718 aa22.08■■□□□ 1.13
SMIM13-202ENST00000416247 SALL2Q9Y467 1007 aaPredicted RBP22.05■■□□□ 1.12
SMIM13-202ENST00000416247 FKBP8Q14318 412 aa22.05■■□□□ 1.12
SMIM13-202ENST00000416247 KIF27Q86VH2 1401 aa22.02■■□□□ 1.12
SMIM13-202ENST00000416247 KCNH8Q96L42 1107 aa22■■□□□ 1.11
SMIM13-202ENST00000416247 TNIKQ9UKE5 1360 aa22■■□□□ 1.11
SMIM13-202ENST00000416247 BAZ1AQ9NRL2 1556 aaPredicted RBP22■■□□□ 1.11
SMIM13-202ENST00000416247 MIER1Q8N108 512 aa21.98■■□□□ 1.11
SMIM13-202ENST00000416247 TMC1Q8TDI8 760 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms