RNA–Protein interactions for RNA: ENST00000416066.1

AL590705.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL590705.3, Length 474 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL590705.3-201ENST00000416066 AEBP2Q6ZN18 517 aaPredicted RBP22.35■■□□□ 1.17
AL590705.3-201ENST00000416066 CHIC1Q5VXU3 224 aa21.05■□□□□ 0.96
AL590705.3-201ENST00000416066 SENP3Q9H4L4 574 aaPredicted RBP19.29■□□□□ 0.68
AL590705.3-201ENST00000416066 PHF23Q9BUL5 403 aaPredicted RBP18.92■□□□□ 0.62
AL590705.3-201ENST00000416066 FOXD1Q16676 465 aa17.95■□□□□ 0.46
AL590705.3-201ENST00000416066 POTEDQ86YR6 584 aa17.46■□□□□ 0.39
AL590705.3-201ENST00000416066 MSH5O43196 834 aa17.11■□□□□ 0.33
AL590705.3-201ENST00000416066 PIAS4Q8N2W9 510 aaPredicted RBP16.71■□□□□ 0.27
AL590705.3-201ENST00000416066 PLPPR3Q6T4P5 718 aa16.47■□□□□ 0.23
AL590705.3-201ENST00000416066 PPP6R1Q9UPN7 881 aa16.36■□□□□ 0.21
AL590705.3-201ENST00000416066 ADRA2BP18089 450 aa16.3■□□□□ 0.2
AL590705.3-201ENST00000416066 DMRT2Q9Y5R5 561 aa15.18■□□□□ 0.02
AL590705.3-201ENST00000416066 MAPK8IP2Q13387 824 aaPredicted RBP15.11■□□□□ 0.01
AL590705.3-201ENST00000416066 SCAF1Q9H7N4 1312 aaKnown RBP15.1■□□□□ 0.01
AL590705.3-201ENST00000416066 CACNB1Q02641 598 aaPredicted RBP14.97□□□□□ -0.01
AL590705.3-201ENST00000416066 DCAF8L1A6NGE4 600 aa14.62□□□□□ -0.07
AL590705.3-201ENST00000416066 RNF39Q9H2S5 420 aa14.49□□□□□ -0.09
AL590705.3-201ENST00000416066 HOXD11P31277 338 aaPredicted RBP14.42□□□□□ -0.1
AL590705.3-201ENST00000416066 PPP4R3CPQ6ZMV5 832 aa14.33□□□□□ -0.12
AL590705.3-201ENST00000416066 C1QBPQ07021 282 aaKnown RBP14.31□□□□□ -0.12
AL590705.3-201ENST00000416066 CNKSR2Q8WXI2 1034 aa14.22□□□□□ -0.13
AL590705.3-201ENST00000416066 RNF216Q9NWF9 866 aaPredicted RBP14.21□□□□□ -0.13
AL590705.3-201ENST00000416066 DNAJC5BQ9UF47 199 aa14.1□□□□□ -0.15
AL590705.3-201ENST00000416066 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.8□□□□□ -0.2
AL590705.3-201ENST00000416066 NCBP3Q53F19 620 aaKnown RBP13.73□□□□□ -0.21
AL590705.3-201ENST00000416066 POTEHQ6S545 545 aa13.62□□□□□ -0.23
AL590705.3-201ENST00000416066 NPM3O75607 178 aaKnown RBP13.44□□□□□ -0.26
AL590705.3-201ENST00000416066 CAPN15O75808 1086 aa13.39□□□□□ -0.27
AL590705.3-201ENST00000416066 DSG3P32926 999 aa13.39□□□□□ -0.27
AL590705.3-201ENST00000416066 U3KPZ7 1027 aaPredicted RBP13.36□□□□□ -0.27
AL590705.3-201ENST00000416066 SPINK5Q9NQ38 1064 aaPredicted RBP13.3□□□□□ -0.28
AL590705.3-201ENST00000416066 KCNA4P22459 653 aa13.13□□□□□ -0.31
AL590705.3-201ENST00000416066 APLP2Q06481 763 aa13.12□□□□□ -0.31
AL590705.3-201ENST00000416066 TRHP20396 242 aaPredicted RBP13.04□□□□□ -0.32
AL590705.3-201ENST00000416066 ZNF219Q9P2Y4 722 aaPredicted RBP13.04□□□□□ -0.32
AL590705.3-201ENST00000416066 ABCB7O75027 752 aa12.98□□□□□ -0.33
AL590705.3-201ENST00000416066 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.97□□□□□ -0.33
AL590705.3-201ENST00000416066 HNRNPUL2Q1KMD3 747 aaKnown RBP12.97□□□□□ -0.33
AL590705.3-201ENST00000416066 SLC4A2P04920 1241 aa12.92□□□□□ -0.34
AL590705.3-201ENST00000416066 RBM42Q9BTD8 480 aaKnown RBP12.89□□□□□ -0.35
AL590705.3-201ENST00000416066 SAMD1Q6SPF0 538 aaPredicted RBP12.82□□□□□ -0.36
AL590705.3-201ENST00000416066 CHRDL2Q6WN34 429 aa12.74□□□□□ -0.37
AL590705.3-201ENST00000416066 POLA2Q14181 598 aa12.58□□□□□ -0.4
AL590705.3-201ENST00000416066 SP7Q8TDD2 431 aaPredicted RBP12.54□□□□□ -0.4
AL590705.3-201ENST00000416066 MYCNP04198 464 aaPredicted RBP12.46□□□□□ -0.41
AL590705.3-201ENST00000416066 AKT1S1Q96B36 256 aa12.44□□□□□ -0.42
AL590705.3-201ENST00000416066 SLC4A1APQ9BWU0 796 aaKnown RBP12.38□□□□□ -0.43
AL590705.3-201ENST00000416066 ZBTB12Q9Y330 459 aaPredicted RBP12.37□□□□□ -0.43
AL590705.3-201ENST00000416066 PIP4P2Q8N4L2 257 aa12.3□□□□□ -0.44
AL590705.3-201ENST00000416066 FOXD4L1Q9NU39 408 aa12.3□□□□□ -0.44
AL590705.3-201ENST00000416066 REM2Q8IYK8 340 aaPredicted RBP12.29□□□□□ -0.44
AL590705.3-201ENST00000416066 HAX1O00165 279 aa12.28□□□□□ -0.44
AL590705.3-201ENST00000416066 ATF5Q9Y2D1 282 aaPredicted RBP12.25□□□□□ -0.45
AL590705.3-201ENST00000416066 FXR2P51116 673 aaKnown RBP eCLIP12.16□□□□□ -0.46
AL590705.3-201ENST00000416066 PITPNM1O00562 1244 aa12.14□□□□□ -0.47
AL590705.3-201ENST00000416066 OSCARQ8IYS5 282 aa12.14□□□□□ -0.47
AL590705.3-201ENST00000416066 ZBTB22O15209 634 aa12.09□□□□□ -0.47
AL590705.3-201ENST00000416066 ATXN8OSP0DMR3 200 aa11.96□□□□□ -0.49
AL590705.3-201ENST00000416066 EVX2Q03828 476 aa11.96□□□□□ -0.49
AL590705.3-201ENST00000416066 SPDYE2BA6NHP3 402 aa11.89□□□□□ -0.51
AL590705.3-201ENST00000416066 SPDYE6P0CI01 402 aa11.89□□□□□ -0.51
AL590705.3-201ENST00000416066 SPDYE2Q495Y8 402 aa11.89□□□□□ -0.51
AL590705.3-201ENST00000416066 PRKAR2AP13861 404 aaKnown RBP11.86□□□□□ -0.51
AL590705.3-201ENST00000416066 FBLN2P98095 1184 aa11.83□□□□□ -0.52
AL590705.3-201ENST00000416066 SPDYE1Q8NFV5 336 aaPredicted RBP11.82□□□□□ -0.52
AL590705.3-201ENST00000416066 CLEC11AQ9Y240 323 aa11.81□□□□□ -0.52
AL590705.3-201ENST00000416066 C19orf67A6NJJ6 358 aa11.78□□□□□ -0.52
AL590705.3-201ENST00000416066 LHX8Q68G74 356 aa11.76□□□□□ -0.53
AL590705.3-201ENST00000416066 GABBR2O75899 941 aa11.74□□□□□ -0.53
AL590705.3-201ENST00000416066 ZNF692Q9BU19 519 aaPredicted RBP11.67□□□□□ -0.54
AL590705.3-201ENST00000416066 MKRN4PQ13434 485 aaPredicted RBP11.64□□□□□ -0.55
AL590705.3-201ENST00000416066 SSUH2Q9Y2M2 353 aa11.61□□□□□ -0.55
AL590705.3-201ENST00000416066 PRR29P0C7W0 189 aa11.57□□□□□ -0.56
AL590705.3-201ENST00000416066 CHADLQ6NUI6 762 aa11.56□□□□□ -0.56
AL590705.3-201ENST00000416066 CLCN6P51797 869 aa11.53□□□□□ -0.56
AL590705.3-201ENST00000416066 CSRNP3Q8WYN3 585 aa11.47□□□□□ -0.57
AL590705.3-201ENST00000416066 CD44P16070 742 aaKnown RBP11.45□□□□□ -0.58
AL590705.3-201ENST00000416066 PABPN1Q86U42 306 aaKnown RBP eCLIP11.45□□□□□ -0.58
AL590705.3-201ENST00000416066 PLSCR2Q9NRY7 297 aa11.44□□□□□ -0.58
AL590705.3-201ENST00000416066 POTEIP0CG38 1075 aa11.42□□□□□ -0.58
AL590705.3-201ENST00000416066 DCBLD2Q96PD2 775 aa11.39□□□□□ -0.59
AL590705.3-201ENST00000416066 FARP1Q9Y4F1 1045 aaPredicted RBP11.39□□□□□ -0.59
AL590705.3-201ENST00000416066 ZNF579Q8NAF0 562 aaKnown RBP11.24□□□□□ -0.61
AL590705.3-201ENST00000416066 EHMT2Q96KQ7 1210 aa11.24□□□□□ -0.61
AL590705.3-201ENST00000416066 ZRANB1Q9UGI0 708 aa11.22□□□□□ -0.61
AL590705.3-201ENST00000416066 OTUD5Q96G74 571 aa11.14□□□□□ -0.63
AL590705.3-201ENST00000416066 STAG3Q9UJ98 1225 aa11.12□□□□□ -0.63
AL590705.3-201ENST00000416066 PAK3O75914 559 aaPredicted RBP11.11□□□□□ -0.63
AL590705.3-201ENST00000416066 GALR2O43603 387 aaPredicted RBP11.1□□□□□ -0.63
AL590705.3-201ENST00000416066 POTEMA6NI47 508 aa11.09□□□□□ -0.63
AL590705.3-201ENST00000416066 CREBZFQ9NS37 354 aa11.07□□□□□ -0.64
AL590705.3-201ENST00000416066 PCDH10Q9P2E7 1040 aa11.05□□□□□ -0.64
AL590705.3-201ENST00000416066 POTEGQ6S5H5 508 aa11.04□□□□□ -0.64
AL590705.3-201ENST00000416066 POTEB2H3BUK9 544 aa11.03□□□□□ -0.64
AL590705.3-201ENST00000416066 SPDYE4A6NLX3 237 aa11.01□□□□□ -0.65
AL590705.3-201ENST00000416066 NPM1P06748 294 aaKnown RBP eCLIP10.98□□□□□ -0.65
AL590705.3-201ENST00000416066 PHF12Q96QT6 1004 aa10.96□□□□□ -0.65
AL590705.3-201ENST00000416066 MAMSTRQ6ZN01 415 aa10.93□□□□□ -0.66
AL590705.3-201ENST00000416066 C7P10643 843 aa10.91□□□□□ -0.66
AL590705.3-201ENST00000416066 PELP1Q8IZL8 1130 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms