RNA–Protein interactions for RNA: ENST00000415808.1

PMCHL2-201, Transcript of pro-melanin concentrating hormone like 2 (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene PMCHL2, Length 1,841 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMCHL2-201ENST00000415808 AEBP2Q6ZN18 517 aaPredicted RBP22.03■■□□□ 1.12
PMCHL2-201ENST00000415808 CHIC1Q5VXU3 224 aa21.45■■□□□ 1.02
PMCHL2-201ENST00000415808 PHF23Q9BUL5 403 aaPredicted RBP18.93■□□□□ 0.62
PMCHL2-201ENST00000415808 SENP3Q9H4L4 574 aaPredicted RBP18.59■□□□□ 0.57
PMCHL2-201ENST00000415808 PLPPR3Q6T4P5 718 aa17.39■□□□□ 0.37
PMCHL2-201ENST00000415808 FOXD1Q16676 465 aa17.31■□□□□ 0.36
PMCHL2-201ENST00000415808 PPP6R1Q9UPN7 881 aa16.71■□□□□ 0.27
PMCHL2-201ENST00000415808 ADRA2BP18089 450 aa16.67■□□□□ 0.26
PMCHL2-201ENST00000415808 PIAS4Q8N2W9 510 aaPredicted RBP16.3■□□□□ 0.2
PMCHL2-201ENST00000415808 MSH5O43196 834 aa15.88■□□□□ 0.13
PMCHL2-201ENST00000415808 PPP4R3CPQ6ZMV5 832 aa15.34■□□□□ 0.05
PMCHL2-201ENST00000415808 MAPK8IP2Q13387 824 aaPredicted RBP15.13■□□□□ 0.01
PMCHL2-201ENST00000415808 SCAF1Q9H7N4 1312 aaKnown RBP15.13■□□□□ 0.01
PMCHL2-201ENST00000415808 POTEDQ86YR6 584 aa15.1■□□□□ 0.01
PMCHL2-201ENST00000415808 KCNA4P22459 653 aa15.05■□□□□ -0
PMCHL2-201ENST00000415808 CNKSR2Q8WXI2 1034 aa14.89□□□□□ -0.03
PMCHL2-201ENST00000415808 NCBP3Q53F19 620 aaKnown RBP14.87□□□□□ -0.03
PMCHL2-201ENST00000415808 DMRT2Q9Y5R5 561 aa14.87□□□□□ -0.03
PMCHL2-201ENST00000415808 NPM3O75607 178 aaKnown RBP14.76□□□□□ -0.05
PMCHL2-201ENST00000415808 RNF216Q9NWF9 866 aaPredicted RBP14.6□□□□□ -0.07
PMCHL2-201ENST00000415808 HOXD11P31277 338 aaPredicted RBP14.56□□□□□ -0.08
PMCHL2-201ENST00000415808 DNAJC5BQ9UF47 199 aa14.29□□□□□ -0.12
PMCHL2-201ENST00000415808 SLC4A1APQ9BWU0 796 aaKnown RBP14.28□□□□□ -0.12
PMCHL2-201ENST00000415808 DCAF8L1A6NGE4 600 aa14.19□□□□□ -0.14
PMCHL2-201ENST00000415808 SLC4A2P04920 1241 aa13.96□□□□□ -0.17
PMCHL2-201ENST00000415808 EHMT2Q96KQ7 1210 aa13.92□□□□□ -0.18
PMCHL2-201ENST00000415808 ZBTB22O15209 634 aa13.9□□□□□ -0.18
PMCHL2-201ENST00000415808 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.84□□□□□ -0.19
PMCHL2-201ENST00000415808 FOXD4L1Q9NU39 408 aa13.78□□□□□ -0.2
PMCHL2-201ENST00000415808 CSRNP3Q8WYN3 585 aa13.78□□□□□ -0.2
PMCHL2-201ENST00000415808 U3KPZ7 1027 aaPredicted RBP13.69□□□□□ -0.22
PMCHL2-201ENST00000415808 RNF39Q9H2S5 420 aa13.67□□□□□ -0.22
PMCHL2-201ENST00000415808 MYCNP04198 464 aaPredicted RBP13.57□□□□□ -0.24
PMCHL2-201ENST00000415808 C1QBPQ07021 282 aaKnown RBP13.46□□□□□ -0.26
PMCHL2-201ENST00000415808 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.41□□□□□ -0.26
PMCHL2-201ENST00000415808 HNRNPUL2Q1KMD3 747 aaKnown RBP13.41□□□□□ -0.26
PMCHL2-201ENST00000415808 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
PMCHL2-201ENST00000415808 SPINK5Q9NQ38 1064 aaPredicted RBP13.32□□□□□ -0.28
PMCHL2-201ENST00000415808 ATF5Q9Y2D1 282 aaPredicted RBP13.32□□□□□ -0.28
PMCHL2-201ENST00000415808 ATXN8OSP0DMR3 200 aa13.28□□□□□ -0.28
PMCHL2-201ENST00000415808 CACNB1Q02641 598 aaPredicted RBP13.27□□□□□ -0.29
PMCHL2-201ENST00000415808 APLP2Q06481 763 aa13.22□□□□□ -0.29
PMCHL2-201ENST00000415808 CAPN15O75808 1086 aa13.19□□□□□ -0.3
PMCHL2-201ENST00000415808 TRHP20396 242 aaPredicted RBP13.15□□□□□ -0.3
PMCHL2-201ENST00000415808 ZNF219Q9P2Y4 722 aaPredicted RBP13.11□□□□□ -0.31
PMCHL2-201ENST00000415808 DSG3P32926 999 aa13.01□□□□□ -0.33
PMCHL2-201ENST00000415808 ABCB7O75027 752 aa12.98□□□□□ -0.33
PMCHL2-201ENST00000415808 POLA2Q14181 598 aa12.95□□□□□ -0.34
PMCHL2-201ENST00000415808 MKRN4PQ13434 485 aaPredicted RBP12.72□□□□□ -0.37
PMCHL2-201ENST00000415808 ZBTB12Q9Y330 459 aaPredicted RBP12.66□□□□□ -0.38
PMCHL2-201ENST00000415808 FBLN2P98095 1184 aa12.62□□□□□ -0.39
PMCHL2-201ENST00000415808 OSCARQ8IYS5 282 aa12.53□□□□□ -0.4
PMCHL2-201ENST00000415808 FKBP8Q14318 412 aa12.41□□□□□ -0.42
PMCHL2-201ENST00000415808 SPDYE4A6NLX3 237 aa12.38□□□□□ -0.43
PMCHL2-201ENST00000415808 SPDYE2BA6NHP3 402 aa12.35□□□□□ -0.43
PMCHL2-201ENST00000415808 SPDYE6P0CI01 402 aa12.35□□□□□ -0.43
PMCHL2-201ENST00000415808 SPDYE2Q495Y8 402 aa12.35□□□□□ -0.43
PMCHL2-201ENST00000415808 ZNF692Q9BU19 519 aaPredicted RBP12.32□□□□□ -0.44
PMCHL2-201ENST00000415808 RBM42Q9BTD8 480 aaKnown RBP12.32□□□□□ -0.44
PMCHL2-201ENST00000415808 SSUH2Q9Y2M2 353 aa12.3□□□□□ -0.44
PMCHL2-201ENST00000415808 PROM2Q8N271 834 aa12.21□□□□□ -0.45
PMCHL2-201ENST00000415808 AKT1S1Q96B36 256 aa12.2□□□□□ -0.46
PMCHL2-201ENST00000415808 PABPN1Q86U42 306 aaKnown RBP eCLIP12.18□□□□□ -0.46
PMCHL2-201ENST00000415808 REM2Q8IYK8 340 aaPredicted RBP12.12□□□□□ -0.47
PMCHL2-201ENST00000415808 PITPNM1O00562 1244 aa12□□□□□ -0.49
PMCHL2-201ENST00000415808 SPDYE1Q8NFV5 336 aaPredicted RBP11.98□□□□□ -0.49
PMCHL2-201ENST00000415808 CLEC11AQ9Y240 323 aa11.95□□□□□ -0.5
PMCHL2-201ENST00000415808 FBXO3Q9UK99 471 aa11.9□□□□□ -0.5
PMCHL2-201ENST00000415808 STAG3Q9UJ98 1225 aa11.9□□□□□ -0.5
PMCHL2-201ENST00000415808 CHRDL2Q6WN34 429 aa11.86□□□□□ -0.51
PMCHL2-201ENST00000415808 PRR29P0C7W0 189 aa11.83□□□□□ -0.52
PMCHL2-201ENST00000415808 VASPP50552 380 aaPredicted RBP11.81□□□□□ -0.52
PMCHL2-201ENST00000415808 FXR2P51116 673 aaKnown RBP eCLIP11.75□□□□□ -0.53
PMCHL2-201ENST00000415808 PIP4P2Q8N4L2 257 aa11.73□□□□□ -0.53
PMCHL2-201ENST00000415808 CREBZFQ9NS37 354 aa11.73□□□□□ -0.53
PMCHL2-201ENST00000415808 MIER1Q8N108 512 aa11.72□□□□□ -0.53
PMCHL2-201ENST00000415808 CHADLQ6NUI6 762 aa11.7□□□□□ -0.54
PMCHL2-201ENST00000415808 PLCD3Q8N3E9 789 aa11.69□□□□□ -0.54
PMCHL2-201ENST00000415808 IFNLR1Q8IU57 520 aaPredicted RBP11.68□□□□□ -0.54
PMCHL2-201ENST00000415808 PRKAR2AP13861 404 aaKnown RBP11.67□□□□□ -0.54
PMCHL2-201ENST00000415808 MNX1P50219 401 aaPredicted RBP11.65□□□□□ -0.55
PMCHL2-201ENST00000415808 POTEHQ6S545 545 aa11.62□□□□□ -0.55
PMCHL2-201ENST00000415808 PLEKHG5O94827 1062 aa11.58□□□□□ -0.56
PMCHL2-201ENST00000415808 FARP1Q9Y4F1 1045 aaPredicted RBP11.56□□□□□ -0.56
PMCHL2-201ENST00000415808 KLHL34Q8N239 644 aa11.56□□□□□ -0.56
PMCHL2-201ENST00000415808 ZBTB47Q9UFB7 747 aaPredicted RBP11.52□□□□□ -0.57
PMCHL2-201ENST00000415808 SPOCK2Q92563 424 aa11.47□□□□□ -0.57
PMCHL2-201ENST00000415808 NUBP1P53384 320 aa11.46□□□□□ -0.57
PMCHL2-201ENST00000415808 NPM1P06748 294 aaKnown RBP eCLIP11.44□□□□□ -0.58
PMCHL2-201ENST00000415808 RASEFQ8IZ41 740 aa11.43□□□□□ -0.58
PMCHL2-201ENST00000415808 C19orf67A6NJJ6 358 aa11.35□□□□□ -0.59
PMCHL2-201ENST00000415808 RTN4Q9NQC3 1192 aaKnown RBP11.35□□□□□ -0.59
PMCHL2-201ENST00000415808 CD44P16070 742 aaKnown RBP11.32□□□□□ -0.6
PMCHL2-201ENST00000415808 TSPYL2Q9H2G4 693 aaPredicted RBP11.32□□□□□ -0.6
PMCHL2-201ENST00000415808 EVX2Q03828 476 aa11.32□□□□□ -0.6
PMCHL2-201ENST00000415808 HAX1O00165 279 aa11.31□□□□□ -0.6
PMCHL2-201ENST00000415808 FAM212AQ96EL1 285 aa11.31□□□□□ -0.6
PMCHL2-201ENST00000415808 PKD2Q13563 968 aa11.3□□□□□ -0.6
PMCHL2-201ENST00000415808 DCAF8Q5TAQ9 597 aa11.3□□□□□ -0.6
PMCHL2-201ENST00000415808 CIZ1Q9ULV3 898 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 161.9 ms