RNA–Protein interactions for RNA: ENST00000415754.1

LINC01717-201, Transcript of long intergenic non-protein coding RNA 1717, humanhuman

TSL 5 BASIC

Gene LINC01717, Length 527 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01717-201ENST00000415754 AEBP2Q6ZN18 517 aaPredicted RBP33.44■■■□□ 2.94
LINC01717-201ENST00000415754 CHIC1Q5VXU3 224 aa31.23■■■□□ 2.59
LINC01717-201ENST00000415754 SENP3Q9H4L4 574 aaPredicted RBP28.58■■■□□ 2.17
LINC01717-201ENST00000415754 PHF23Q9BUL5 403 aaPredicted RBP28.16■■■□□ 2.1
LINC01717-201ENST00000415754 FOXD1Q16676 465 aa26.73■■□□□ 1.87
LINC01717-201ENST00000415754 POTEDQ86YR6 584 aa25.51■■□□□ 1.67
LINC01717-201ENST00000415754 MSH5O43196 834 aa25.19■■□□□ 1.62
LINC01717-201ENST00000415754 PIAS4Q8N2W9 510 aaPredicted RBP24.83■■□□□ 1.57
LINC01717-201ENST00000415754 PLPPR3Q6T4P5 718 aa24.71■■□□□ 1.55
LINC01717-201ENST00000415754 PPP6R1Q9UPN7 881 aa24.6■■□□□ 1.53
LINC01717-201ENST00000415754 ADRA2BP18089 450 aa24.49■■□□□ 1.51
LINC01717-201ENST00000415754 MAPK8IP2Q13387 824 aaPredicted RBP22.66■■□□□ 1.22
LINC01717-201ENST00000415754 DMRT2Q9Y5R5 561 aa22.59■■□□□ 1.21
LINC01717-201ENST00000415754 SCAF1Q9H7N4 1312 aaKnown RBP22.38■■□□□ 1.17
LINC01717-201ENST00000415754 CACNB1Q02641 598 aaPredicted RBP21.95■■□□□ 1.1
LINC01717-201ENST00000415754 DCAF8L1A6NGE4 600 aa21.7■■□□□ 1.06
LINC01717-201ENST00000415754 PPP4R3CPQ6ZMV5 832 aa21.6■■□□□ 1.05
LINC01717-201ENST00000415754 HOXD11P31277 338 aaPredicted RBP21.56■■□□□ 1.04
LINC01717-201ENST00000415754 RNF39Q9H2S5 420 aa21.46■■□□□ 1.03
LINC01717-201ENST00000415754 CNKSR2Q8WXI2 1034 aa21.31■■□□□ 1
LINC01717-201ENST00000415754 RNF216Q9NWF9 866 aaPredicted RBP21.25■□□□□ 0.99
LINC01717-201ENST00000415754 C1QBPQ07021 282 aaKnown RBP21.11■□□□□ 0.97
LINC01717-201ENST00000415754 DNAJC5BQ9UF47 199 aa20.91■□□□□ 0.94
LINC01717-201ENST00000415754 NCBP3Q53F19 620 aaKnown RBP20.59■□□□□ 0.89
LINC01717-201ENST00000415754 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.54■□□□□ 0.88
LINC01717-201ENST00000415754 NPM3O75607 178 aaKnown RBP20.31■□□□□ 0.84
LINC01717-201ENST00000415754 U3KPZ7 1027 aaPredicted RBP20.05■□□□□ 0.8
LINC01717-201ENST00000415754 SPINK5Q9NQ38 1064 aaPredicted RBP19.93■□□□□ 0.78
LINC01717-201ENST00000415754 DSG3P32926 999 aa19.92■□□□□ 0.78
LINC01717-201ENST00000415754 CAPN15O75808 1086 aa19.91■□□□□ 0.78
LINC01717-201ENST00000415754 POTEHQ6S545 545 aa19.88■□□□□ 0.77
LINC01717-201ENST00000415754 SLC4A2P04920 1241 aa19.55■□□□□ 0.72
LINC01717-201ENST00000415754 TRHP20396 242 aaPredicted RBP19.47■□□□□ 0.71
LINC01717-201ENST00000415754 KCNA4P22459 653 aa19.46■□□□□ 0.71
LINC01717-201ENST00000415754 ABCB7O75027 752 aa19.41■□□□□ 0.7
LINC01717-201ENST00000415754 APLP2Q06481 763 aa19.4■□□□□ 0.7
LINC01717-201ENST00000415754 ZNF219Q9P2Y4 722 aaPredicted RBP19.39■□□□□ 0.69
LINC01717-201ENST00000415754 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.27■□□□□ 0.68
LINC01717-201ENST00000415754 HNRNPUL2Q1KMD3 747 aaKnown RBP19.27■□□□□ 0.68
LINC01717-201ENST00000415754 SAMD1Q6SPF0 538 aaPredicted RBP19.14■□□□□ 0.65
LINC01717-201ENST00000415754 RBM42Q9BTD8 480 aaKnown RBP19■□□□□ 0.63
LINC01717-201ENST00000415754 POLA2Q14181 598 aa18.83■□□□□ 0.6
LINC01717-201ENST00000415754 CHRDL2Q6WN34 429 aa18.81■□□□□ 0.6
LINC01717-201ENST00000415754 MYCNP04198 464 aaPredicted RBP18.78■□□□□ 0.6
LINC01717-201ENST00000415754 AKT1S1Q96B36 256 aa18.46■□□□□ 0.55
LINC01717-201ENST00000415754 ATF5Q9Y2D1 282 aaPredicted RBP18.42■□□□□ 0.54
LINC01717-201ENST00000415754 SP7Q8TDD2 431 aaPredicted RBP18.39■□□□□ 0.53
LINC01717-201ENST00000415754 ZBTB12Q9Y330 459 aaPredicted RBP18.37■□□□□ 0.53
LINC01717-201ENST00000415754 FOXD4L1Q9NU39 408 aa18.31■□□□□ 0.52
LINC01717-201ENST00000415754 REM2Q8IYK8 340 aaPredicted RBP18.3■□□□□ 0.52
LINC01717-201ENST00000415754 PIP4P2Q8N4L2 257 aa18.25■□□□□ 0.51
LINC01717-201ENST00000415754 SLC4A1APQ9BWU0 796 aaKnown RBP18.25■□□□□ 0.51
LINC01717-201ENST00000415754 OSCARQ8IYS5 282 aa18.24■□□□□ 0.51
LINC01717-201ENST00000415754 PITPNM1O00562 1244 aa18.11■□□□□ 0.49
LINC01717-201ENST00000415754 HAX1O00165 279 aa18.07■□□□□ 0.48
LINC01717-201ENST00000415754 FXR2P51116 673 aaKnown RBP eCLIP18.06■□□□□ 0.48
LINC01717-201ENST00000415754 ZBTB22O15209 634 aa17.89■□□□□ 0.45
LINC01717-201ENST00000415754 EVX2Q03828 476 aa17.83■□□□□ 0.44
LINC01717-201ENST00000415754 ATXN8OSP0DMR3 200 aa17.79■□□□□ 0.44
LINC01717-201ENST00000415754 SPDYE2BA6NHP3 402 aa17.78■□□□□ 0.44
LINC01717-201ENST00000415754 SPDYE6P0CI01 402 aa17.78■□□□□ 0.44
LINC01717-201ENST00000415754 SPDYE2Q495Y8 402 aa17.78■□□□□ 0.44
LINC01717-201ENST00000415754 FBLN2P98095 1184 aa17.71■□□□□ 0.43
LINC01717-201ENST00000415754 PRKAR2AP13861 404 aaKnown RBP17.64■□□□□ 0.41
LINC01717-201ENST00000415754 CLEC11AQ9Y240 323 aa17.61■□□□□ 0.41
LINC01717-201ENST00000415754 SPDYE1Q8NFV5 336 aaPredicted RBP17.6■□□□□ 0.41
LINC01717-201ENST00000415754 MKRN4PQ13434 485 aaPredicted RBP17.54■□□□□ 0.4
LINC01717-201ENST00000415754 C19orf67A6NJJ6 358 aa17.5■□□□□ 0.39
LINC01717-201ENST00000415754 ZNF692Q9BU19 519 aaPredicted RBP17.49■□□□□ 0.39
LINC01717-201ENST00000415754 SSUH2Q9Y2M2 353 aa17.49■□□□□ 0.39
LINC01717-201ENST00000415754 GABBR2O75899 941 aa17.38■□□□□ 0.37
LINC01717-201ENST00000415754 CHADLQ6NUI6 762 aa17.34■□□□□ 0.37
LINC01717-201ENST00000415754 LHX8Q68G74 356 aa17.25■□□□□ 0.35
LINC01717-201ENST00000415754 PRR29P0C7W0 189 aa17.24■□□□□ 0.35
LINC01717-201ENST00000415754 PABPN1Q86U42 306 aaKnown RBP eCLIP17.22■□□□□ 0.35
LINC01717-201ENST00000415754 CD44P16070 742 aaKnown RBP17.04■□□□□ 0.32
LINC01717-201ENST00000415754 POTEIP0CG38 1075 aa17.02■□□□□ 0.32
LINC01717-201ENST00000415754 FARP1Q9Y4F1 1045 aaPredicted RBP17.02■□□□□ 0.32
LINC01717-201ENST00000415754 CLCN6P51797 869 aa16.9■□□□□ 0.3
LINC01717-201ENST00000415754 DCBLD2Q96PD2 775 aa16.79■□□□□ 0.28
LINC01717-201ENST00000415754 ZNF579Q8NAF0 562 aaKnown RBP16.76■□□□□ 0.27
LINC01717-201ENST00000415754 EHMT2Q96KQ7 1210 aa16.75■□□□□ 0.27
LINC01717-201ENST00000415754 ZRANB1Q9UGI0 708 aa16.73■□□□□ 0.27
LINC01717-201ENST00000415754 CREBZFQ9NS37 354 aa16.69■□□□□ 0.26
LINC01717-201ENST00000415754 STAG3Q9UJ98 1225 aa16.62■□□□□ 0.25
LINC01717-201ENST00000415754 GALR2O43603 387 aaPredicted RBP16.6■□□□□ 0.25
LINC01717-201ENST00000415754 CSRNP3Q8WYN3 585 aa16.58■□□□□ 0.24
LINC01717-201ENST00000415754 PLSCR2Q9NRY7 297 aa16.57■□□□□ 0.24
LINC01717-201ENST00000415754 OTUD5Q96G74 571 aa16.49■□□□□ 0.23
LINC01717-201ENST00000415754 POTEB2H3BUK9 544 aa16.45■□□□□ 0.22
LINC01717-201ENST00000415754 PAK3O75914 559 aaPredicted RBP16.45■□□□□ 0.22
LINC01717-201ENST00000415754 PHF12Q96QT6 1004 aa16.45■□□□□ 0.22
LINC01717-201ENST00000415754 SPDYE4A6NLX3 237 aa16.43■□□□□ 0.22
LINC01717-201ENST00000415754 NPM1P06748 294 aaKnown RBP eCLIP16.35■□□□□ 0.21
LINC01717-201ENST00000415754 MNX1P50219 401 aaPredicted RBP16.34■□□□□ 0.21
LINC01717-201ENST00000415754 PELP1Q8IZL8 1130 aaKnown RBP16.34■□□□□ 0.21
LINC01717-201ENST00000415754 POTEMA6NI47 508 aa16.26■□□□□ 0.19
LINC01717-201ENST00000415754 ASTLQ6HA08 431 aaPredicted RBP16.21■□□□□ 0.19
LINC01717-201ENST00000415754 MS4A3Q96HJ5 214 aa16.21■□□□□ 0.19
LINC01717-201ENST00000415754 POTEGQ6S5H5 508 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms