RNA–Protein interactions for RNA: ENST00000415676.6

CACNA2D3-202, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA2D3, Length 3,661 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D3-202ENST00000415676 NISCHQ9Y2I1 1504 aa29.1■■■□□ 2.25
CACNA2D3-202ENST00000415676 SHROOM4Q9ULL8 1493 aa26.79■■□□□ 1.88
CACNA2D3-202ENST00000415676 SUPT5HO00267 1087 aaKnown RBP26.51■■□□□ 1.83
CACNA2D3-202ENST00000415676 DCAF8L2P0C7V8 631 aa26.46■■□□□ 1.83
CACNA2D3-202ENST00000415676 PCGF6Q9BYE7 350 aa25.25■■□□□ 1.63
CACNA2D3-202ENST00000415676 EHMT2Q96KQ7 1210 aa25.19■■□□□ 1.62
CACNA2D3-202ENST00000415676 CHIC1Q5VXU3 224 aa25■■□□□ 1.59
CACNA2D3-202ENST00000415676 LOC105371045A0A1W2PR82 267 aa24.91■■□□□ 1.58
CACNA2D3-202ENST00000415676 PPARGC1BQ86YN6 1023 aaKnown RBP24.84■■□□□ 1.57
CACNA2D3-202ENST00000415676 FAM9AQ8IZU1 332 aaPredicted RBP24.79■■□□□ 1.56
CACNA2D3-202ENST00000415676 HRCP23327 699 aa24.71■■□□□ 1.55
CACNA2D3-202ENST00000415676 MYO15BQ96JP2 1530 aa24.67■■□□□ 1.54
CACNA2D3-202ENST00000415676 ZCCHC6Q5VYS8 1495 aaKnown RBP24.46■■□□□ 1.51
CACNA2D3-202ENST00000415676 TTBK1Q5TCY1 1321 aaPredicted RBP24.31■■□□□ 1.48
CACNA2D3-202ENST00000415676 TRIM41Q8WV44 630 aa24.23■■□□□ 1.47
CACNA2D3-202ENST00000415676 TRIM26Q12899 539 aaPredicted RBP23.99■■□□□ 1.43
CACNA2D3-202ENST00000415676 CCDC180Q9P1Z9 1646 aa23.84■■□□□ 1.41
CACNA2D3-202ENST00000415676 CCER1Q8TC90 406 aaPredicted RBP23.69■■□□□ 1.38
CACNA2D3-202ENST00000415676 ABCC9O60706 1549 aa23.65■■□□□ 1.38
CACNA2D3-202ENST00000415676 ZEB1P37275 1124 aaPredicted RBP23.65■■□□□ 1.38
CACNA2D3-202ENST00000415676 SCRIBQ14160 1630 aa23.65■■□□□ 1.38
CACNA2D3-202ENST00000415676 RANGAP1P46060 587 aaPredicted RBP23.63■■□□□ 1.37
CACNA2D3-202ENST00000415676 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.63■■□□□ 1.37
CACNA2D3-202ENST00000415676 DCAF1Q9Y4B6 1507 aa23.51■■□□□ 1.35
CACNA2D3-202ENST00000415676 RSF1Q96T23 1441 aaPredicted RBP23.44■■□□□ 1.34
CACNA2D3-202ENST00000415676 YTHDC1Q96MU7 727 aaKnown RBP23.43■■□□□ 1.34
CACNA2D3-202ENST00000415676 UBTFP17480 764 aaKnown RBP23.36■■□□□ 1.33
CACNA2D3-202ENST00000415676 PABPN1Q86U42 306 aaKnown RBP eCLIP23.24■■□□□ 1.31
CACNA2D3-202ENST00000415676 CECR2Q9BXF3 1484 aa23.23■■□□□ 1.31
CACNA2D3-202ENST00000415676 PELP1Q8IZL8 1130 aaKnown RBP23.21■■□□□ 1.31
CACNA2D3-202ENST00000415676 CENPBP07199 599 aaPredicted RBP23.21■■□□□ 1.31
CACNA2D3-202ENST00000415676 RB1CC1Q8TDY2 1594 aa23.2■■□□□ 1.31
CACNA2D3-202ENST00000415676 SCAF1Q9H7N4 1312 aaKnown RBP23.18■■□□□ 1.3
CACNA2D3-202ENST00000415676 HNRNPUL2Q1KMD3 747 aaKnown RBP23.12■■□□□ 1.29
CACNA2D3-202ENST00000415676 DIEXFQ68CQ4 756 aaKnown RBP23.09■■□□□ 1.29
CACNA2D3-202ENST00000415676 GTF3C3Q9Y5Q9 886 aa23.04■■□□□ 1.28
CACNA2D3-202ENST00000415676 APLP2Q06481 763 aa23■■□□□ 1.27
CACNA2D3-202ENST00000415676 MROH2BQ7Z745 1585 aa22.93■■□□□ 1.26
CACNA2D3-202ENST00000415676 NEUROD1Q13562 356 aa22.93■■□□□ 1.26
CACNA2D3-202ENST00000415676 ACIN1Q9UKV3 1341 aaKnown RBP22.88■■□□□ 1.25
CACNA2D3-202ENST00000415676 WIZO95785 1651 aa22.77■■□□□ 1.24
CACNA2D3-202ENST00000415676 ITGAEP38570 1179 aa22.74■■□□□ 1.23
CACNA2D3-202ENST00000415676 CSRNP3Q8WYN3 585 aa22.73■■□□□ 1.23
CACNA2D3-202ENST00000415676 ABCC8Q09428 1581 aa22.71■■□□□ 1.23
CACNA2D3-202ENST00000415676 SOGA1O94964 1423 aa22.68■■□□□ 1.22
CACNA2D3-202ENST00000415676 CCDC88BA6NC98 1476 aa22.63■■□□□ 1.21
CACNA2D3-202ENST00000415676 ATP1B4Q9UN42 357 aaPredicted RBP22.56■■□□□ 1.2
CACNA2D3-202ENST00000415676 CEP162Q5TB80 1403 aa22.56■■□□□ 1.2
CACNA2D3-202ENST00000415676 ZNF316A6NFI3 1004 aaPredicted RBP22.55■■□□□ 1.2
CACNA2D3-202ENST00000415676 RUSC2Q8N2Y8 1516 aa22.53■■□□□ 1.2
CACNA2D3-202ENST00000415676 MIER1Q8N108 512 aa22.44■■□□□ 1.18
CACNA2D3-202ENST00000415676 NACADO15069 1562 aa22.44■■□□□ 1.18
CACNA2D3-202ENST00000415676 BAZ1AQ9NRL2 1556 aaPredicted RBP22.29■■□□□ 1.16
CACNA2D3-202ENST00000415676 BCANQ96GW7 911 aa22.29■■□□□ 1.16
CACNA2D3-202ENST00000415676 TNIKQ9UKE5 1360 aa22.24■■□□□ 1.15
CACNA2D3-202ENST00000415676 P3H3Q8IVL6 736 aa22.22■■□□□ 1.15
CACNA2D3-202ENST00000415676 WRNQ14191 1432 aaPredicted RBP eCLIP22.2■■□□□ 1.15
CACNA2D3-202ENST00000415676 CLIP1P30622 1438 aa22.2■■□□□ 1.14
CACNA2D3-202ENST00000415676 MYT1Q01538 1121 aa22.13■■□□□ 1.13
CACNA2D3-202ENST00000415676 GOLGA3Q08378 1498 aa22.11■■□□□ 1.13
CACNA2D3-202ENST00000415676 FAM50AQ14320 339 aaKnown RBP22.08■■□□□ 1.13
CACNA2D3-202ENST00000415676 HIRIP3Q9BW71 556 aaPredicted RBP22.08■■□□□ 1.13
CACNA2D3-202ENST00000415676 KANK4Q5T7N3 995 aaPredicted RBP22.07■■□□□ 1.12
CACNA2D3-202ENST00000415676 TOP2AP11388 1531 aaKnown RBP22.07■■□□□ 1.12
CACNA2D3-202ENST00000415676 SMARCA2P51531 1590 aa22.03■■□□□ 1.12
CACNA2D3-202ENST00000415676 SMARCA4P51532 1647 aa22.02■■□□□ 1.12
CACNA2D3-202ENST00000415676 NEFLP07196 543 aa21.99■■□□□ 1.11
CACNA2D3-202ENST00000415676 CNGB1Q14028 1251 aaPredicted RBP21.97■■□□□ 1.11
CACNA2D3-202ENST00000415676 RAPGEF2Q9Y4G8 1499 aa21.95■■□□□ 1.1
CACNA2D3-202ENST00000415676 CEP164Q9UPV0 1460 aa21.89■■□□□ 1.09
CACNA2D3-202ENST00000415676 EEA1Q15075 1411 aa21.88■■□□□ 1.09
CACNA2D3-202ENST00000415676 BAZ1BQ9UIG0 1483 aaKnown RBP21.87■■□□□ 1.09
CACNA2D3-202ENST00000415676 ARID3CA6NKF2 412 aa21.85■■□□□ 1.09
CACNA2D3-202ENST00000415676 KCNH8Q96L42 1107 aa21.85■■□□□ 1.09
CACNA2D3-202ENST00000415676 DDX10Q13206 875 aaKnown RBP21.84■■□□□ 1.09
CACNA2D3-202ENST00000415676 VPS8Q8N3P4 1428 aa21.81■■□□□ 1.08
CACNA2D3-202ENST00000415676 SIN3AQ96ST3 1273 aa21.81■■□□□ 1.08
CACNA2D3-202ENST00000415676 ERICH6Q7L0X2 663 aa21.79■■□□□ 1.08
CACNA2D3-202ENST00000415676 FKBP8Q14318 412 aa21.77■■□□□ 1.08
CACNA2D3-202ENST00000415676 SYNJ1O43426 1573 aa21.76■■□□□ 1.07
CACNA2D3-202ENST00000415676 TRIM52Q96A61 297 aa21.75■■□□□ 1.07
CACNA2D3-202ENST00000415676 EIF4G1Q04637 1599 aaKnown RBP21.71■■□□□ 1.07
CACNA2D3-202ENST00000415676 ATAD2BQ9ULI0 1458 aa21.68■■□□□ 1.06
CACNA2D3-202ENST00000415676 SUPT16HQ9Y5B9 1047 aaKnown RBP21.68■■□□□ 1.06
CACNA2D3-202ENST00000415676 POLR3GLQ9BT43 218 aa21.66■■□□□ 1.06
CACNA2D3-202ENST00000415676 DHX57Q6P158 1386 aaKnown RBP21.61■■□□□ 1.05
CACNA2D3-202ENST00000415676 IRX6P78412 446 aaPredicted RBP21.57■■□□□ 1.04
CACNA2D3-202ENST00000415676 ANP32CO43423 234 aa21.56■■□□□ 1.04
CACNA2D3-202ENST00000415676 KIF21BO75037 1637 aa21.55■■□□□ 1.04
CACNA2D3-202ENST00000415676 CHIC2Q9UKJ5 165 aa21.54■■□□□ 1.04
CACNA2D3-202ENST00000415676 SENP3-EIF4A1A0A087X0R7 540 aa21.54■■□□□ 1.04
CACNA2D3-202ENST00000415676 UNC13AQ9UPW8 1703 aa21.52■■□□□ 1.04
CACNA2D3-202ENST00000415676 CCNB3Q8WWL7 1395 aa21.52■■□□□ 1.04
CACNA2D3-202ENST00000415676 KIF27Q86VH2 1401 aa21.5■■□□□ 1.03
CACNA2D3-202ENST00000415676 BICRAQ9NZM4 1560 aa21.49■■□□□ 1.03
CACNA2D3-202ENST00000415676 RAB3GAP2Q9H2M9 1393 aa21.46■■□□□ 1.03
CACNA2D3-202ENST00000415676 ARAP1Q96P48 1450 aa21.46■■□□□ 1.03
CACNA2D3-202ENST00000415676 CUX2O14529 1486 aa21.45■■□□□ 1.03
CACNA2D3-202ENST00000415676 HNRNPUQ00839 825 aaKnown RBP eCLIP21.4■■□□□ 1.02
CACNA2D3-202ENST00000415676 RRP7BPQ9NSQ0 103 aa21.39■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms