RNA–Protein interactions for RNA: ENST00000415533.1

RPL23AP39-201, Transcript of ribosomal protein L23a pseudogene 39, humanhuman

BASIC

Gene RPL23AP39, Length 405 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23AP39-201ENST00000415533 AEBP2Q6ZN18 517 aaPredicted RBP21.4■■□□□ 1.02
RPL23AP39-201ENST00000415533 CHIC1Q5VXU3 224 aa20.86■□□□□ 0.93
RPL23AP39-201ENST00000415533 PHF23Q9BUL5 403 aaPredicted RBP18.43■□□□□ 0.54
RPL23AP39-201ENST00000415533 SENP3Q9H4L4 574 aaPredicted RBP18.01■□□□□ 0.47
RPL23AP39-201ENST00000415533 PLPPR3Q6T4P5 718 aa16.92■□□□□ 0.3
RPL23AP39-201ENST00000415533 FOXD1Q16676 465 aa16.8■□□□□ 0.28
RPL23AP39-201ENST00000415533 PPP6R1Q9UPN7 881 aa16.26■□□□□ 0.19
RPL23AP39-201ENST00000415533 ADRA2BP18089 450 aa16.24■□□□□ 0.19
RPL23AP39-201ENST00000415533 PIAS4Q8N2W9 510 aaPredicted RBP15.83■□□□□ 0.12
RPL23AP39-201ENST00000415533 MSH5O43196 834 aa15.35■□□□□ 0.05
RPL23AP39-201ENST00000415533 PPP4R3CPQ6ZMV5 832 aa14.97□□□□□ -0.01
RPL23AP39-201ENST00000415533 KCNA4P22459 653 aa14.76□□□□□ -0.05
RPL23AP39-201ENST00000415533 MAPK8IP2Q13387 824 aaPredicted RBP14.74□□□□□ -0.05
RPL23AP39-201ENST00000415533 SCAF1Q9H7N4 1312 aaKnown RBP14.66□□□□□ -0.06
RPL23AP39-201ENST00000415533 NCBP3Q53F19 620 aaKnown RBP14.49□□□□□ -0.09
RPL23AP39-201ENST00000415533 CNKSR2Q8WXI2 1034 aa14.48□□□□□ -0.09
RPL23AP39-201ENST00000415533 DMRT2Q9Y5R5 561 aa14.42□□□□□ -0.1
RPL23AP39-201ENST00000415533 NPM3O75607 178 aaKnown RBP14.41□□□□□ -0.1
RPL23AP39-201ENST00000415533 RNF216Q9NWF9 866 aaPredicted RBP14.19□□□□□ -0.14
RPL23AP39-201ENST00000415533 HOXD11P31277 338 aaPredicted RBP14.13□□□□□ -0.15
RPL23AP39-201ENST00000415533 SLC4A1APQ9BWU0 796 aaKnown RBP14□□□□□ -0.17
RPL23AP39-201ENST00000415533 POTEDQ86YR6 584 aa13.97□□□□□ -0.17
RPL23AP39-201ENST00000415533 DNAJC5BQ9UF47 199 aa13.85□□□□□ -0.19
RPL23AP39-201ENST00000415533 DCAF8L1A6NGE4 600 aa13.82□□□□□ -0.2
RPL23AP39-201ENST00000415533 EHMT2Q96KQ7 1210 aa13.75□□□□□ -0.21
RPL23AP39-201ENST00000415533 ZBTB22O15209 634 aa13.63□□□□□ -0.23
RPL23AP39-201ENST00000415533 SLC4A2P04920 1241 aa13.62□□□□□ -0.23
RPL23AP39-201ENST00000415533 CSRNP3Q8WYN3 585 aa13.54□□□□□ -0.24
RPL23AP39-201ENST00000415533 FOXD4L1Q9NU39 408 aa13.48□□□□□ -0.25
RPL23AP39-201ENST00000415533 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.46□□□□□ -0.25
RPL23AP39-201ENST00000415533 U3KPZ7 1027 aaPredicted RBP13.32□□□□□ -0.28
RPL23AP39-201ENST00000415533 MYCNP04198 464 aaPredicted RBP13.24□□□□□ -0.29
RPL23AP39-201ENST00000415533 RNF39Q9H2S5 420 aa13.23□□□□□ -0.29
RPL23AP39-201ENST00000415533 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.33
RPL23AP39-201ENST00000415533 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.01□□□□□ -0.33
RPL23AP39-201ENST00000415533 HNRNPUL2Q1KMD3 747 aaKnown RBP13.01□□□□□ -0.33
RPL23AP39-201ENST00000415533 SAMD1Q6SPF0 538 aaPredicted RBP13.01□□□□□ -0.33
RPL23AP39-201ENST00000415533 C1QBPQ07021 282 aaKnown RBP13□□□□□ -0.33
RPL23AP39-201ENST00000415533 SPINK5Q9NQ38 1064 aaPredicted RBP12.96□□□□□ -0.33
RPL23AP39-201ENST00000415533 ATXN8OSP0DMR3 200 aa12.93□□□□□ -0.34
RPL23AP39-201ENST00000415533 CAPN15O75808 1086 aa12.84□□□□□ -0.35
RPL23AP39-201ENST00000415533 TRHP20396 242 aaPredicted RBP12.82□□□□□ -0.36
RPL23AP39-201ENST00000415533 CACNB1Q02641 598 aaPredicted RBP12.82□□□□□ -0.36
RPL23AP39-201ENST00000415533 APLP2Q06481 763 aa12.82□□□□□ -0.36
RPL23AP39-201ENST00000415533 ZNF219Q9P2Y4 722 aaPredicted RBP12.73□□□□□ -0.37
RPL23AP39-201ENST00000415533 ABCB7O75027 752 aa12.67□□□□□ -0.38
RPL23AP39-201ENST00000415533 DSG3P32926 999 aa12.62□□□□□ -0.39
RPL23AP39-201ENST00000415533 POLA2Q14181 598 aa12.61□□□□□ -0.39
RPL23AP39-201ENST00000415533 MKRN4PQ13434 485 aaPredicted RBP12.43□□□□□ -0.42
RPL23AP39-201ENST00000415533 FBLN2P98095 1184 aa12.31□□□□□ -0.44
RPL23AP39-201ENST00000415533 ZBTB12Q9Y330 459 aaPredicted RBP12.28□□□□□ -0.44
RPL23AP39-201ENST00000415533 FKBP8Q14318 412 aa12.23□□□□□ -0.45
RPL23AP39-201ENST00000415533 OSCARQ8IYS5 282 aa12.22□□□□□ -0.45
RPL23AP39-201ENST00000415533 SPDYE4A6NLX3 237 aa12.11□□□□□ -0.47
RPL23AP39-201ENST00000415533 SPDYE2BA6NHP3 402 aa12.01□□□□□ -0.49
RPL23AP39-201ENST00000415533 SPDYE6P0CI01 402 aa12.01□□□□□ -0.49
RPL23AP39-201ENST00000415533 SPDYE2Q495Y8 402 aa12.01□□□□□ -0.49
RPL23AP39-201ENST00000415533 ZNF692Q9BU19 519 aaPredicted RBP12.01□□□□□ -0.49
RPL23AP39-201ENST00000415533 SSUH2Q9Y2M2 353 aa11.97□□□□□ -0.49
RPL23AP39-201ENST00000415533 PROM2Q8N271 834 aa11.92□□□□□ -0.5
RPL23AP39-201ENST00000415533 RBM42Q9BTD8 480 aaKnown RBP11.92□□□□□ -0.5
RPL23AP39-201ENST00000415533 PABPN1Q86U42 306 aaKnown RBP eCLIP11.88□□□□□ -0.51
RPL23AP39-201ENST00000415533 AKT1S1Q96B36 256 aa11.82□□□□□ -0.52
RPL23AP39-201ENST00000415533 REM2Q8IYK8 340 aaPredicted RBP11.76□□□□□ -0.53
RPL23AP39-201ENST00000415533 PITPNM1O00562 1244 aa11.66□□□□□ -0.54
RPL23AP39-201ENST00000415533 CLEC11AQ9Y240 323 aa11.65□□□□□ -0.54
RPL23AP39-201ENST00000415533 SPDYE1Q8NFV5 336 aaPredicted RBP11.64□□□□□ -0.55
RPL23AP39-201ENST00000415533 FBXO3Q9UK99 471 aa11.64□□□□□ -0.55
RPL23AP39-201ENST00000415533 VASPP50552 380 aaPredicted RBP11.58□□□□□ -0.56
RPL23AP39-201ENST00000415533 STAG3Q9UJ98 1225 aa11.57□□□□□ -0.56
RPL23AP39-201ENST00000415533 PRR29P0C7W0 189 aa11.51□□□□□ -0.57
RPL23AP39-201ENST00000415533 CHRDL2Q6WN34 429 aa11.48□□□□□ -0.57
RPL23AP39-201ENST00000415533 IFNLR1Q8IU57 520 aaPredicted RBP11.47□□□□□ -0.57
RPL23AP39-201ENST00000415533 MIER1Q8N108 512 aa11.46□□□□□ -0.57
RPL23AP39-201ENST00000415533 PLCD3Q8N3E9 789 aa11.45□□□□□ -0.58
RPL23AP39-201ENST00000415533 CREBZFQ9NS37 354 aa11.44□□□□□ -0.58
RPL23AP39-201ENST00000415533 CHADLQ6NUI6 762 aa11.42□□□□□ -0.58
RPL23AP39-201ENST00000415533 FXR2P51116 673 aaKnown RBP eCLIP11.39□□□□□ -0.59
RPL23AP39-201ENST00000415533 PIP4P2Q8N4L2 257 aa11.38□□□□□ -0.59
RPL23AP39-201ENST00000415533 PRKAR2AP13861 404 aaKnown RBP11.34□□□□□ -0.59
RPL23AP39-201ENST00000415533 MNX1P50219 401 aaPredicted RBP11.34□□□□□ -0.59
RPL23AP39-201ENST00000415533 KLHL34Q8N239 644 aa11.34□□□□□ -0.59
RPL23AP39-201ENST00000415533 PLEKHG5O94827 1062 aa11.29□□□□□ -0.6
RPL23AP39-201ENST00000415533 RTN4Q9NQC3 1192 aaKnown RBP11.27□□□□□ -0.61
RPL23AP39-201ENST00000415533 SPOCK2Q92563 424 aa11.25□□□□□ -0.61
RPL23AP39-201ENST00000415533 FARP1Q9Y4F1 1045 aaPredicted RBP11.24□□□□□ -0.61
RPL23AP39-201ENST00000415533 ZBTB47Q9UFB7 747 aaPredicted RBP11.22□□□□□ -0.61
RPL23AP39-201ENST00000415533 NUBP1P53384 320 aa11.2□□□□□ -0.62
RPL23AP39-201ENST00000415533 RASEFQ8IZ41 740 aa11.17□□□□□ -0.62
RPL23AP39-201ENST00000415533 AMER1Q5JTC6 1135 aaPredicted RBP11.16□□□□□ -0.62
RPL23AP39-201ENST00000415533 NPM1P06748 294 aaKnown RBP eCLIP11.14□□□□□ -0.63
RPL23AP39-201ENST00000415533 PKD2Q13563 968 aa11.11□□□□□ -0.63
RPL23AP39-201ENST00000415533 CIZ1Q9ULV3 898 aaPredicted RBP11.1□□□□□ -0.63
RPL23AP39-201ENST00000415533 TSPYL2Q9H2G4 693 aaPredicted RBP11.07□□□□□ -0.64
RPL23AP39-201ENST00000415533 DCAF8Q5TAQ9 597 aa11.06□□□□□ -0.64
RPL23AP39-201ENST00000415533 POTEHQ6S545 545 aa11.05□□□□□ -0.64
RPL23AP39-201ENST00000415533 FAM212AQ96EL1 285 aa11.05□□□□□ -0.64
RPL23AP39-201ENST00000415533 CD44P16070 742 aaKnown RBP11.02□□□□□ -0.65
RPL23AP39-201ENST00000415533 C19orf67A6NJJ6 358 aa11□□□□□ -0.65
RPL23AP39-201ENST00000415533 GSE1Q14687 1217 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms