RNA–Protein interactions for RNA: ENST00000415230.1

RAB9AP4-201, Transcript of RAB9A, member RAS oncogene family pseudogene 4, humanhuman

BASIC

Gene RAB9AP4, Length 609 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB9AP4-201ENST00000415230 AEBP2Q6ZN18 517 aaPredicted RBP27.1■■□□□ 1.93
RAB9AP4-201ENST00000415230 CHIC1Q5VXU3 224 aa25.71■■□□□ 1.71
RAB9AP4-201ENST00000415230 SENP3Q9H4L4 574 aaPredicted RBP23.12■■□□□ 1.29
RAB9AP4-201ENST00000415230 PHF23Q9BUL5 403 aaPredicted RBP22.81■■□□□ 1.24
RAB9AP4-201ENST00000415230 FOXD1Q16676 465 aa21.55■■□□□ 1.04
RAB9AP4-201ENST00000415230 PLPPR3Q6T4P5 718 aa20.64■□□□□ 0.89
RAB9AP4-201ENST00000415230 MSH5O43196 834 aa20.18■□□□□ 0.82
RAB9AP4-201ENST00000415230 PPP6R1Q9UPN7 881 aa20.13■□□□□ 0.81
RAB9AP4-201ENST00000415230 PIAS4Q8N2W9 510 aaPredicted RBP20.06■□□□□ 0.8
RAB9AP4-201ENST00000415230 ADRA2BP18089 450 aa20.02■□□□□ 0.8
RAB9AP4-201ENST00000415230 POTEDQ86YR6 584 aa19.75■□□□□ 0.75
RAB9AP4-201ENST00000415230 MAPK8IP2Q13387 824 aaPredicted RBP18.41■□□□□ 0.54
RAB9AP4-201ENST00000415230 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
RAB9AP4-201ENST00000415230 DMRT2Q9Y5R5 561 aa18.35■□□□□ 0.53
RAB9AP4-201ENST00000415230 PPP4R3CPQ6ZMV5 832 aa18.21■□□□□ 0.51
RAB9AP4-201ENST00000415230 CNKSR2Q8WXI2 1034 aa17.71■□□□□ 0.43
RAB9AP4-201ENST00000415230 HOXD11P31277 338 aaPredicted RBP17.69■□□□□ 0.42
RAB9AP4-201ENST00000415230 KCNA4P22459 653 aa17.55■□□□□ 0.4
RAB9AP4-201ENST00000415230 NCBP3Q53F19 620 aaKnown RBP17.53■□□□□ 0.4
RAB9AP4-201ENST00000415230 RNF216Q9NWF9 866 aaPredicted RBP17.52■□□□□ 0.4
RAB9AP4-201ENST00000415230 DCAF8L1A6NGE4 600 aa17.43■□□□□ 0.38
RAB9AP4-201ENST00000415230 NPM3O75607 178 aaKnown RBP17.43■□□□□ 0.38
RAB9AP4-201ENST00000415230 CACNB1Q02641 598 aaPredicted RBP17.28■□□□□ 0.36
RAB9AP4-201ENST00000415230 RNF39Q9H2S5 420 aa17.24■□□□□ 0.35
RAB9AP4-201ENST00000415230 DNAJC5BQ9UF47 199 aa17.17■□□□□ 0.34
RAB9AP4-201ENST00000415230 C1QBPQ07021 282 aaKnown RBP16.99■□□□□ 0.31
RAB9AP4-201ENST00000415230 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.74■□□□□ 0.27
RAB9AP4-201ENST00000415230 SLC4A2P04920 1241 aa16.58■□□□□ 0.24
RAB9AP4-201ENST00000415230 SLC4A1APQ9BWU0 796 aaKnown RBP16.58■□□□□ 0.24
RAB9AP4-201ENST00000415230 U3KPZ7 1027 aaPredicted RBP16.43■□□□□ 0.22
RAB9AP4-201ENST00000415230 ZBTB22O15209 634 aa16.22■□□□□ 0.19
RAB9AP4-201ENST00000415230 SPINK5Q9NQ38 1064 aaPredicted RBP16.18■□□□□ 0.18
RAB9AP4-201ENST00000415230 FOXD4L1Q9NU39 408 aa16.14■□□□□ 0.17
RAB9AP4-201ENST00000415230 DSG3P32926 999 aa16.12■□□□□ 0.17
RAB9AP4-201ENST00000415230 CAPN15O75808 1086 aa16.1■□□□□ 0.17
RAB9AP4-201ENST00000415230 MYCNP04198 464 aaPredicted RBP16.02■□□□□ 0.16
RAB9AP4-201ENST00000415230 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.96■□□□□ 0.15
RAB9AP4-201ENST00000415230 APLP2Q06481 763 aa15.96■□□□□ 0.15
RAB9AP4-201ENST00000415230 HNRNPUL2Q1KMD3 747 aaKnown RBP15.96■□□□□ 0.15
RAB9AP4-201ENST00000415230 SAMD1Q6SPF0 538 aaPredicted RBP15.89■□□□□ 0.13
RAB9AP4-201ENST00000415230 ZNF219Q9P2Y4 722 aaPredicted RBP15.87■□□□□ 0.13
RAB9AP4-201ENST00000415230 EHMT2Q96KQ7 1210 aa15.84■□□□□ 0.13
RAB9AP4-201ENST00000415230 TRHP20396 242 aaPredicted RBP15.83■□□□□ 0.12
RAB9AP4-201ENST00000415230 CSRNP3Q8WYN3 585 aa15.83■□□□□ 0.12
RAB9AP4-201ENST00000415230 ATF5Q9Y2D1 282 aaPredicted RBP15.78■□□□□ 0.12
RAB9AP4-201ENST00000415230 ABCB7O75027 752 aa15.71■□□□□ 0.11
RAB9AP4-201ENST00000415230 ATXN8OSP0DMR3 200 aa15.55■□□□□ 0.08
RAB9AP4-201ENST00000415230 POLA2Q14181 598 aa15.46■□□□□ 0.07
RAB9AP4-201ENST00000415230 POTEHQ6S545 545 aa15.46■□□□□ 0.07
RAB9AP4-201ENST00000415230 RBM42Q9BTD8 480 aaKnown RBP15.36■□□□□ 0.05
RAB9AP4-201ENST00000415230 ZBTB12Q9Y330 459 aaPredicted RBP15.16■□□□□ 0.02
RAB9AP4-201ENST00000415230 MKRN4PQ13434 485 aaPredicted RBP15.07■□□□□ 0
RAB9AP4-201ENST00000415230 CHRDL2Q6WN34 429 aa15.03■□□□□ -0
RAB9AP4-201ENST00000415230 AKT1S1Q96B36 256 aa15.02■□□□□ -0
RAB9AP4-201ENST00000415230 OSCARQ8IYS5 282 aa14.98□□□□□ -0.01
RAB9AP4-201ENST00000415230 FBLN2P98095 1184 aa14.92□□□□□ -0.02
RAB9AP4-201ENST00000415230 REM2Q8IYK8 340 aaPredicted RBP14.86□□□□□ -0.03
RAB9AP4-201ENST00000415230 SPDYE2BA6NHP3 402 aa14.7□□□□□ -0.06
RAB9AP4-201ENST00000415230 SPDYE6P0CI01 402 aa14.7□□□□□ -0.06
RAB9AP4-201ENST00000415230 SPDYE2Q495Y8 402 aa14.7□□□□□ -0.06
RAB9AP4-201ENST00000415230 PITPNM1O00562 1244 aa14.68□□□□□ -0.06
RAB9AP4-201ENST00000415230 PIP4P2Q8N4L2 257 aa14.67□□□□□ -0.06
RAB9AP4-201ENST00000415230 SSUH2Q9Y2M2 353 aa14.64□□□□□ -0.07
RAB9AP4-201ENST00000415230 FXR2P51116 673 aaKnown RBP eCLIP14.62□□□□□ -0.07
RAB9AP4-201ENST00000415230 ZNF692Q9BU19 519 aaPredicted RBP14.61□□□□□ -0.07
RAB9AP4-201ENST00000415230 SPDYE4A6NLX3 237 aa14.48□□□□□ -0.09
RAB9AP4-201ENST00000415230 SP7Q8TDD2 431 aaPredicted RBP14.48□□□□□ -0.09
RAB9AP4-201ENST00000415230 PABPN1Q86U42 306 aaKnown RBP eCLIP14.44□□□□□ -0.1
RAB9AP4-201ENST00000415230 SPDYE1Q8NFV5 336 aaPredicted RBP14.44□□□□□ -0.1
RAB9AP4-201ENST00000415230 HAX1O00165 279 aa14.37□□□□□ -0.11
RAB9AP4-201ENST00000415230 CLEC11AQ9Y240 323 aa14.32□□□□□ -0.12
RAB9AP4-201ENST00000415230 PRKAR2AP13861 404 aaKnown RBP14.28□□□□□ -0.12
RAB9AP4-201ENST00000415230 PROM2Q8N271 834 aa14.28□□□□□ -0.12
RAB9AP4-201ENST00000415230 FKBP8Q14318 412 aa14.26□□□□□ -0.13
RAB9AP4-201ENST00000415230 EVX2Q03828 476 aa14.24□□□□□ -0.13
RAB9AP4-201ENST00000415230 C19orf67A6NJJ6 358 aa14.15□□□□□ -0.14
RAB9AP4-201ENST00000415230 PRR29P0C7W0 189 aa14.14□□□□□ -0.15
RAB9AP4-201ENST00000415230 CHADLQ6NUI6 762 aa14.07□□□□□ -0.16
RAB9AP4-201ENST00000415230 STAG3Q9UJ98 1225 aa14.04□□□□□ -0.16
RAB9AP4-201ENST00000415230 CREBZFQ9NS37 354 aa13.97□□□□□ -0.17
RAB9AP4-201ENST00000415230 FARP1Q9Y4F1 1045 aaPredicted RBP13.94□□□□□ -0.18
RAB9AP4-201ENST00000415230 GABBR2O75899 941 aa13.92□□□□□ -0.18
RAB9AP4-201ENST00000415230 MNX1P50219 401 aaPredicted RBP13.83□□□□□ -0.2
RAB9AP4-201ENST00000415230 CD44P16070 742 aaKnown RBP13.82□□□□□ -0.2
RAB9AP4-201ENST00000415230 CLCN6P51797 869 aa13.77□□□□□ -0.21
RAB9AP4-201ENST00000415230 MIER1Q8N108 512 aa13.72□□□□□ -0.21
RAB9AP4-201ENST00000415230 FBXO3Q9UK99 471 aa13.7□□□□□ -0.22
RAB9AP4-201ENST00000415230 ZNF579Q8NAF0 562 aaKnown RBP13.67□□□□□ -0.22
RAB9AP4-201ENST00000415230 POTEIP0CG38 1075 aa13.65□□□□□ -0.22
RAB9AP4-201ENST00000415230 PLCD3Q8N3E9 789 aa13.65□□□□□ -0.22
RAB9AP4-201ENST00000415230 SLC24A1O60721 1099 aa13.64□□□□□ -0.23
RAB9AP4-201ENST00000415230 VASPP50552 380 aaPredicted RBP13.64□□□□□ -0.23
RAB9AP4-201ENST00000415230 ZRANB1Q9UGI0 708 aa13.61□□□□□ -0.23
RAB9AP4-201ENST00000415230 NPM1P06748 294 aaKnown RBP eCLIP13.57□□□□□ -0.24
RAB9AP4-201ENST00000415230 LHX8Q68G74 356 aa13.57□□□□□ -0.24
RAB9AP4-201ENST00000415230 PLEKHG5O94827 1062 aa13.53□□□□□ -0.24
RAB9AP4-201ENST00000415230 RASEFQ8IZ41 740 aa13.51□□□□□ -0.25
RAB9AP4-201ENST00000415230 NUBP1P53384 320 aa13.49□□□□□ -0.25
RAB9AP4-201ENST00000415230 IFNLR1Q8IU57 520 aaPredicted RBP13.49□□□□□ -0.25
RAB9AP4-201ENST00000415230 PAK3O75914 559 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 217.1 ms