RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 AEBP2Q6ZN18 517 aaPredicted RBP21.97■■□□□ 1.11
PTPRK-210ENST00000415055 CHIC1Q5VXU3 224 aa20.93■□□□□ 0.94
PTPRK-210ENST00000415055 SENP3Q9H4L4 574 aaPredicted RBP18.78■□□□□ 0.6
PTPRK-210ENST00000415055 PHF23Q9BUL5 403 aaPredicted RBP18.52■□□□□ 0.56
PTPRK-210ENST00000415055 FOXD1Q16676 465 aa17.47■□□□□ 0.39
PTPRK-210ENST00000415055 PLPPR3Q6T4P5 718 aa16.76■□□□□ 0.27
PTPRK-210ENST00000415055 MSH5O43196 834 aa16.37■□□□□ 0.21
PTPRK-210ENST00000415055 PIAS4Q8N2W9 510 aaPredicted RBP16.35■□□□□ 0.21
PTPRK-210ENST00000415055 PPP6R1Q9UPN7 881 aa16.35■□□□□ 0.21
PTPRK-210ENST00000415055 ADRA2BP18089 450 aa16.31■□□□□ 0.2
PTPRK-210ENST00000415055 POTEDQ86YR6 584 aa15.87■□□□□ 0.13
PTPRK-210ENST00000415055 SCAF1Q9H7N4 1312 aaKnown RBP14.97□□□□□ -0.01
PTPRK-210ENST00000415055 MAPK8IP2Q13387 824 aaPredicted RBP14.97□□□□□ -0.01
PTPRK-210ENST00000415055 DMRT2Q9Y5R5 561 aa14.88□□□□□ -0.03
PTPRK-210ENST00000415055 PPP4R3CPQ6ZMV5 832 aa14.69□□□□□ -0.06
PTPRK-210ENST00000415055 CNKSR2Q8WXI2 1034 aa14.41□□□□□ -0.1
PTPRK-210ENST00000415055 HOXD11P31277 338 aaPredicted RBP14.36□□□□□ -0.11
PTPRK-210ENST00000415055 DCAF8L1A6NGE4 600 aa14.28□□□□□ -0.12
PTPRK-210ENST00000415055 RNF216Q9NWF9 866 aaPredicted RBP14.27□□□□□ -0.13
PTPRK-210ENST00000415055 NCBP3Q53F19 620 aaKnown RBP14.16□□□□□ -0.14
PTPRK-210ENST00000415055 CACNB1Q02641 598 aaPredicted RBP14.01□□□□□ -0.17
PTPRK-210ENST00000415055 RNF39Q9H2S5 420 aa13.95□□□□□ -0.18
PTPRK-210ENST00000415055 NPM3O75607 178 aaKnown RBP13.92□□□□□ -0.18
PTPRK-210ENST00000415055 DNAJC5BQ9UF47 199 aa13.88□□□□□ -0.19
PTPRK-210ENST00000415055 C1QBPQ07021 282 aaKnown RBP13.76□□□□□ -0.21
PTPRK-210ENST00000415055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.69□□□□□ -0.22
PTPRK-210ENST00000415055 KCNA4P22459 653 aa13.68□□□□□ -0.22
PTPRK-210ENST00000415055 U3KPZ7 1027 aaPredicted RBP13.39□□□□□ -0.27
PTPRK-210ENST00000415055 SLC4A2P04920 1241 aa13.27□□□□□ -0.29
PTPRK-210ENST00000415055 CAPN15O75808 1086 aa13.18□□□□□ -0.3
PTPRK-210ENST00000415055 SPINK5Q9NQ38 1064 aaPredicted RBP13.17□□□□□ -0.3
PTPRK-210ENST00000415055 DSG3P32926 999 aa13.08□□□□□ -0.32
PTPRK-210ENST00000415055 APLP2Q06481 763 aa13.07□□□□□ -0.32
PTPRK-210ENST00000415055 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.06□□□□□ -0.32
PTPRK-210ENST00000415055 HNRNPUL2Q1KMD3 747 aaKnown RBP13.06□□□□□ -0.32
PTPRK-210ENST00000415055 SAMD1Q6SPF0 538 aaPredicted RBP12.98□□□□□ -0.33
PTPRK-210ENST00000415055 TRHP20396 242 aaPredicted RBP12.97□□□□□ -0.33
PTPRK-210ENST00000415055 ZNF219Q9P2Y4 722 aaPredicted RBP12.96□□□□□ -0.33
PTPRK-210ENST00000415055 SLC4A1APQ9BWU0 796 aaKnown RBP12.95□□□□□ -0.34
PTPRK-210ENST00000415055 MYCNP04198 464 aaPredicted RBP12.9□□□□□ -0.34
PTPRK-210ENST00000415055 ABCB7O75027 752 aa12.85□□□□□ -0.35
PTPRK-210ENST00000415055 FOXD4L1Q9NU39 408 aa12.78□□□□□ -0.36
PTPRK-210ENST00000415055 POLA2Q14181 598 aa12.63□□□□□ -0.39
PTPRK-210ENST00000415055 ZBTB22O15209 634 aa12.57□□□□□ -0.4
PTPRK-210ENST00000415055 ATF5Q9Y2D1 282 aaPredicted RBP12.56□□□□□ -0.4
PTPRK-210ENST00000415055 RBM42Q9BTD8 480 aaKnown RBP12.51□□□□□ -0.41
PTPRK-210ENST00000415055 POTEHQ6S545 545 aa12.45□□□□□ -0.42
PTPRK-210ENST00000415055 ATXN8OSP0DMR3 200 aa12.4□□□□□ -0.42
PTPRK-210ENST00000415055 ZBTB12Q9Y330 459 aaPredicted RBP12.4□□□□□ -0.42
PTPRK-210ENST00000415055 AKT1S1Q96B36 256 aa12.22□□□□□ -0.45
PTPRK-210ENST00000415055 OSCARQ8IYS5 282 aa12.21□□□□□ -0.45
PTPRK-210ENST00000415055 CHRDL2Q6WN34 429 aa12.19□□□□□ -0.46
PTPRK-210ENST00000415055 FBLN2P98095 1184 aa12.11□□□□□ -0.47
PTPRK-210ENST00000415055 REM2Q8IYK8 340 aaPredicted RBP12.09□□□□□ -0.47
PTPRK-210ENST00000415055 CSRNP3Q8WYN3 585 aa12.04□□□□□ -0.48
PTPRK-210ENST00000415055 SPDYE2BA6NHP3 402 aa12.01□□□□□ -0.49
PTPRK-210ENST00000415055 SPDYE6P0CI01 402 aa12.01□□□□□ -0.49
PTPRK-210ENST00000415055 SPDYE2Q495Y8 402 aa12.01□□□□□ -0.49
PTPRK-210ENST00000415055 MKRN4PQ13434 485 aaPredicted RBP11.99□□□□□ -0.49
PTPRK-210ENST00000415055 PITPNM1O00562 1244 aa11.95□□□□□ -0.5
PTPRK-210ENST00000415055 EHMT2Q96KQ7 1210 aa11.91□□□□□ -0.5
PTPRK-210ENST00000415055 PIP4P2Q8N4L2 257 aa11.9□□□□□ -0.5
PTPRK-210ENST00000415055 ZNF692Q9BU19 519 aaPredicted RBP11.87□□□□□ -0.51
PTPRK-210ENST00000415055 FXR2P51116 673 aaKnown RBP eCLIP11.85□□□□□ -0.51
PTPRK-210ENST00000415055 SSUH2Q9Y2M2 353 aa11.84□□□□□ -0.51
PTPRK-210ENST00000415055 SPDYE1Q8NFV5 336 aaPredicted RBP11.79□□□□□ -0.52
PTPRK-210ENST00000415055 CLEC11AQ9Y240 323 aa11.76□□□□□ -0.53
PTPRK-210ENST00000415055 SP7Q8TDD2 431 aaPredicted RBP11.7□□□□□ -0.54
PTPRK-210ENST00000415055 HAX1O00165 279 aa11.69□□□□□ -0.54
PTPRK-210ENST00000415055 PABPN1Q86U42 306 aaKnown RBP eCLIP11.69□□□□□ -0.54
PTPRK-210ENST00000415055 PRKAR2AP13861 404 aaKnown RBP11.65□□□□□ -0.54
PTPRK-210ENST00000415055 PRR29P0C7W0 189 aa11.58□□□□□ -0.56
PTPRK-210ENST00000415055 EVX2Q03828 476 aa11.51□□□□□ -0.57
PTPRK-210ENST00000415055 CHADLQ6NUI6 762 aa11.51□□□□□ -0.57
PTPRK-210ENST00000415055 C19orf67A6NJJ6 358 aa11.47□□□□□ -0.57
PTPRK-210ENST00000415055 SPDYE4A6NLX3 237 aa11.47□□□□□ -0.57
PTPRK-210ENST00000415055 STAG3Q9UJ98 1225 aa11.4□□□□□ -0.58
PTPRK-210ENST00000415055 FARP1Q9Y4F1 1045 aaPredicted RBP11.37□□□□□ -0.59
PTPRK-210ENST00000415055 NISCHQ9Y2I1 1504 aa11.33□□□□□ -0.6
PTPRK-210ENST00000415055 CD44P16070 742 aaKnown RBP11.29□□□□□ -0.6
PTPRK-210ENST00000415055 CREBZFQ9NS37 354 aa11.29□□□□□ -0.6
PTPRK-210ENST00000415055 GABBR2O75899 941 aa11.28□□□□□ -0.6
PTPRK-210ENST00000415055 PROM2Q8N271 834 aa11.18□□□□□ -0.62
PTPRK-210ENST00000415055 CLCN6P51797 869 aa11.17□□□□□ -0.62
PTPRK-210ENST00000415055 ZRANB1Q9UGI0 708 aa11.13□□□□□ -0.63
PTPRK-210ENST00000415055 NPM1P06748 294 aaKnown RBP eCLIP11.12□□□□□ -0.63
PTPRK-210ENST00000415055 ZNF579Q8NAF0 562 aaKnown RBP11.12□□□□□ -0.63
PTPRK-210ENST00000415055 MNX1P50219 401 aaPredicted RBP11.09□□□□□ -0.63
PTPRK-210ENST00000415055 PAK3O75914 559 aaPredicted RBP11.08□□□□□ -0.64
PTPRK-210ENST00000415055 POTEIP0CG38 1075 aa11.02□□□□□ -0.65
PTPRK-210ENST00000415055 DCBLD2Q96PD2 775 aa11.01□□□□□ -0.65
PTPRK-210ENST00000415055 LHX8Q68G74 356 aa10.97□□□□□ -0.65
PTPRK-210ENST00000415055 PHF12Q96QT6 1004 aa10.97□□□□□ -0.65
PTPRK-210ENST00000415055 GALR2O43603 387 aaPredicted RBP10.96□□□□□ -0.65
PTPRK-210ENST00000415055 PLEKHG5O94827 1062 aa10.96□□□□□ -0.65
PTPRK-210ENST00000415055 MIER1Q8N108 512 aa10.94□□□□□ -0.66
PTPRK-210ENST00000415055 FKBP8Q14318 412 aa10.93□□□□□ -0.66
PTPRK-210ENST00000415055 TSPYL2Q9H2G4 693 aaPredicted RBP10.88□□□□□ -0.67
PTPRK-210ENST00000415055 PLCD3Q8N3E9 789 aa10.86□□□□□ -0.67
PTPRK-210ENST00000415055 CCDC61Q9Y6R9 512 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms