RNA–Protein interactions for RNA: ENST00000414394.1

AC062039.1-201, humanhuman

TSL 2 BASIC

Gene AC062039.1, Length 565 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC062039.1-201ENST00000414394 AEBP2Q6ZN18 517 aaPredicted RBP26.96■■□□□ 1.91
AC062039.1-201ENST00000414394 CHIC1Q5VXU3 224 aa25.14■■□□□ 1.62
AC062039.1-201ENST00000414394 SENP3Q9H4L4 574 aaPredicted RBP23■■□□□ 1.27
AC062039.1-201ENST00000414394 PHF23Q9BUL5 403 aaPredicted RBP22.68■■□□□ 1.22
AC062039.1-201ENST00000414394 FOXD1Q16676 465 aa21.54■■□□□ 1.04
AC062039.1-201ENST00000414394 POTEDQ86YR6 584 aa20.59■□□□□ 0.89
AC062039.1-201ENST00000414394 MSH5O43196 834 aa20.27■□□□□ 0.84
AC062039.1-201ENST00000414394 PIAS4Q8N2W9 510 aaPredicted RBP19.99■□□□□ 0.79
AC062039.1-201ENST00000414394 PLPPR3Q6T4P5 718 aa19.86■□□□□ 0.77
AC062039.1-201ENST00000414394 PPP6R1Q9UPN7 881 aa19.84■□□□□ 0.77
AC062039.1-201ENST00000414394 ADRA2BP18089 450 aa19.73■□□□□ 0.75
AC062039.1-201ENST00000414394 MAPK8IP2Q13387 824 aaPredicted RBP18.27■□□□□ 0.52
AC062039.1-201ENST00000414394 DMRT2Q9Y5R5 561 aa18.19■□□□□ 0.5
AC062039.1-201ENST00000414394 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
AC062039.1-201ENST00000414394 CACNB1Q02641 598 aaPredicted RBP17.68■□□□□ 0.42
AC062039.1-201ENST00000414394 DCAF8L1A6NGE4 600 aa17.45■□□□□ 0.38
AC062039.1-201ENST00000414394 PPP4R3CPQ6ZMV5 832 aa17.38■□□□□ 0.37
AC062039.1-201ENST00000414394 HOXD11P31277 338 aaPredicted RBP17.36■□□□□ 0.37
AC062039.1-201ENST00000414394 RNF39Q9H2S5 420 aa17.29■□□□□ 0.36
AC062039.1-201ENST00000414394 CNKSR2Q8WXI2 1034 aa17.13■□□□□ 0.33
AC062039.1-201ENST00000414394 RNF216Q9NWF9 866 aaPredicted RBP17.09■□□□□ 0.33
AC062039.1-201ENST00000414394 C1QBPQ07021 282 aaKnown RBP16.99■□□□□ 0.31
AC062039.1-201ENST00000414394 DNAJC5BQ9UF47 199 aa16.82■□□□□ 0.28
AC062039.1-201ENST00000414394 NCBP3Q53F19 620 aaKnown RBP16.53■□□□□ 0.24
AC062039.1-201ENST00000414394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.51■□□□□ 0.23
AC062039.1-201ENST00000414394 NPM3O75607 178 aaKnown RBP16.34■□□□□ 0.21
AC062039.1-201ENST00000414394 U3KPZ7 1027 aaPredicted RBP16.15■□□□□ 0.18
AC062039.1-201ENST00000414394 SPINK5Q9NQ38 1064 aaPredicted RBP16.06■□□□□ 0.16
AC062039.1-201ENST00000414394 DSG3P32926 999 aa16.05■□□□□ 0.16
AC062039.1-201ENST00000414394 POTEHQ6S545 545 aa16.03■□□□□ 0.16
AC062039.1-201ENST00000414394 CAPN15O75808 1086 aa16.01■□□□□ 0.15
AC062039.1-201ENST00000414394 SLC4A2P04920 1241 aa15.75■□□□□ 0.11
AC062039.1-201ENST00000414394 TRHP20396 242 aaPredicted RBP15.66■□□□□ 0.1
AC062039.1-201ENST00000414394 KCNA4P22459 653 aa15.65■□□□□ 0.1
AC062039.1-201ENST00000414394 ABCB7O75027 752 aa15.63■□□□□ 0.09
AC062039.1-201ENST00000414394 ZNF219Q9P2Y4 722 aaPredicted RBP15.58■□□□□ 0.08
AC062039.1-201ENST00000414394 APLP2Q06481 763 aa15.56■□□□□ 0.08
AC062039.1-201ENST00000414394 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.47■□□□□ 0.07
AC062039.1-201ENST00000414394 HNRNPUL2Q1KMD3 747 aaKnown RBP15.47■□□□□ 0.07
AC062039.1-201ENST00000414394 SAMD1Q6SPF0 538 aaPredicted RBP15.38■□□□□ 0.05
AC062039.1-201ENST00000414394 RBM42Q9BTD8 480 aaKnown RBP15.27■□□□□ 0.04
AC062039.1-201ENST00000414394 POLA2Q14181 598 aa15.15■□□□□ 0.02
AC062039.1-201ENST00000414394 CHRDL2Q6WN34 429 aa15.15■□□□□ 0.02
AC062039.1-201ENST00000414394 MYCNP04198 464 aaPredicted RBP15.09■□□□□ 0.01
AC062039.1-201ENST00000414394 AKT1S1Q96B36 256 aa14.85□□□□□ -0.03
AC062039.1-201ENST00000414394 ATF5Q9Y2D1 282 aaPredicted RBP14.84□□□□□ -0.03
AC062039.1-201ENST00000414394 SP7Q8TDD2 431 aaPredicted RBP14.81□□□□□ -0.04
AC062039.1-201ENST00000414394 ZBTB12Q9Y330 459 aaPredicted RBP14.75□□□□□ -0.05
AC062039.1-201ENST00000414394 REM2Q8IYK8 340 aaPredicted RBP14.74□□□□□ -0.05
AC062039.1-201ENST00000414394 PIP4P2Q8N4L2 257 aa14.71□□□□□ -0.05
AC062039.1-201ENST00000414394 FOXD4L1Q9NU39 408 aa14.71□□□□□ -0.05
AC062039.1-201ENST00000414394 OSCARQ8IYS5 282 aa14.68□□□□□ -0.06
AC062039.1-201ENST00000414394 SLC4A1APQ9BWU0 796 aaKnown RBP14.65□□□□□ -0.06
AC062039.1-201ENST00000414394 PITPNM1O00562 1244 aa14.59□□□□□ -0.07
AC062039.1-201ENST00000414394 HAX1O00165 279 aa14.55□□□□□ -0.08
AC062039.1-201ENST00000414394 FXR2P51116 673 aaKnown RBP eCLIP14.55□□□□□ -0.08
AC062039.1-201ENST00000414394 ZBTB22O15209 634 aa14.4□□□□□ -0.1
AC062039.1-201ENST00000414394 EVX2Q03828 476 aa14.4□□□□□ -0.1
AC062039.1-201ENST00000414394 SPDYE2BA6NHP3 402 aa14.29□□□□□ -0.12
AC062039.1-201ENST00000414394 SPDYE6P0CI01 402 aa14.29□□□□□ -0.12
AC062039.1-201ENST00000414394 SPDYE2Q495Y8 402 aa14.29□□□□□ -0.12
AC062039.1-201ENST00000414394 ATXN8OSP0DMR3 200 aa14.28□□□□□ -0.12
AC062039.1-201ENST00000414394 FBLN2P98095 1184 aa14.22□□□□□ -0.13
AC062039.1-201ENST00000414394 PRKAR2AP13861 404 aaKnown RBP14.2□□□□□ -0.14
AC062039.1-201ENST00000414394 CLEC11AQ9Y240 323 aa14.16□□□□□ -0.14
AC062039.1-201ENST00000414394 SPDYE1Q8NFV5 336 aaPredicted RBP14.15□□□□□ -0.14
AC062039.1-201ENST00000414394 MKRN4PQ13434 485 aaPredicted RBP14.13□□□□□ -0.15
AC062039.1-201ENST00000414394 C19orf67A6NJJ6 358 aa14.1□□□□□ -0.15
AC062039.1-201ENST00000414394 SSUH2Q9Y2M2 353 aa14.07□□□□□ -0.16
AC062039.1-201ENST00000414394 ZNF692Q9BU19 519 aaPredicted RBP14.06□□□□□ -0.16
AC062039.1-201ENST00000414394 GABBR2O75899 941 aa14.01□□□□□ -0.17
AC062039.1-201ENST00000414394 CHADLQ6NUI6 762 aa13.96□□□□□ -0.17
AC062039.1-201ENST00000414394 LHX8Q68G74 356 aa13.9□□□□□ -0.18
AC062039.1-201ENST00000414394 PRR29P0C7W0 189 aa13.86□□□□□ -0.19
AC062039.1-201ENST00000414394 PABPN1Q86U42 306 aaKnown RBP eCLIP13.85□□□□□ -0.19
AC062039.1-201ENST00000414394 POTEIP0CG38 1075 aa13.74□□□□□ -0.21
AC062039.1-201ENST00000414394 CD44P16070 742 aaKnown RBP13.71□□□□□ -0.21
AC062039.1-201ENST00000414394 FARP1Q9Y4F1 1045 aaPredicted RBP13.69□□□□□ -0.22
AC062039.1-201ENST00000414394 CLCN6P51797 869 aa13.57□□□□□ -0.24
AC062039.1-201ENST00000414394 DCBLD2Q96PD2 775 aa13.5□□□□□ -0.25
AC062039.1-201ENST00000414394 ZNF579Q8NAF0 562 aaKnown RBP13.48□□□□□ -0.25
AC062039.1-201ENST00000414394 ZRANB1Q9UGI0 708 aa13.46□□□□□ -0.25
AC062039.1-201ENST00000414394 CREBZFQ9NS37 354 aa13.44□□□□□ -0.26
AC062039.1-201ENST00000414394 GALR2O43603 387 aaPredicted RBP13.38□□□□□ -0.27
AC062039.1-201ENST00000414394 PLSCR2Q9NRY7 297 aa13.35□□□□□ -0.27
AC062039.1-201ENST00000414394 CSRNP3Q8WYN3 585 aa13.34□□□□□ -0.27
AC062039.1-201ENST00000414394 STAG3Q9UJ98 1225 aa13.34□□□□□ -0.27
AC062039.1-201ENST00000414394 OTUD5Q96G74 571 aa13.3□□□□□ -0.28
AC062039.1-201ENST00000414394 POTEB2H3BUK9 544 aa13.28□□□□□ -0.28
AC062039.1-201ENST00000414394 PHF12Q96QT6 1004 aa13.24□□□□□ -0.29
AC062039.1-201ENST00000414394 SPDYE4A6NLX3 237 aa13.2□□□□□ -0.3
AC062039.1-201ENST00000414394 PAK3O75914 559 aaPredicted RBP13.2□□□□□ -0.3
AC062039.1-201ENST00000414394 PELP1Q8IZL8 1130 aaKnown RBP13.18□□□□□ -0.3
AC062039.1-201ENST00000414394 MNX1P50219 401 aaPredicted RBP13.17□□□□□ -0.3
AC062039.1-201ENST00000414394 NPM1P06748 294 aaKnown RBP eCLIP13.12□□□□□ -0.31
AC062039.1-201ENST00000414394 POTEMA6NI47 508 aa13.1□□□□□ -0.31
AC062039.1-201ENST00000414394 MS4A3Q96HJ5 214 aa13.06□□□□□ -0.32
AC062039.1-201ENST00000414394 ASTLQ6HA08 431 aaPredicted RBP13.05□□□□□ -0.32
AC062039.1-201ENST00000414394 POTEGQ6S5H5 508 aa13.05□□□□□ -0.32
AC062039.1-201ENST00000414394 METRNQ9UJH8 293 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 172.4 ms