RNA–Protein interactions for RNA: ENST00000413879.1

AC004987.3-201, humanhuman

BASIC

Gene AC004987.3, Length 771 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004987.3-201ENST00000413879 AEBP2Q6ZN18 517 aaPredicted RBP23.33■■□□□ 1.33
AC004987.3-201ENST00000413879 CHIC1Q5VXU3 224 aa21.9■■□□□ 1.1
AC004987.3-201ENST00000413879 SENP3Q9H4L4 574 aaPredicted RBP20■□□□□ 0.79
AC004987.3-201ENST00000413879 PHF23Q9BUL5 403 aaPredicted RBP19.73■□□□□ 0.75
AC004987.3-201ENST00000413879 FOXD1Q16676 465 aa18.66■□□□□ 0.58
AC004987.3-201ENST00000413879 POTEDQ86YR6 584 aa17.63■□□□□ 0.41
AC004987.3-201ENST00000413879 MSH5O43196 834 aa17.6■□□□□ 0.41
AC004987.3-201ENST00000413879 PLPPR3Q6T4P5 718 aa17.43■□□□□ 0.38
AC004987.3-201ENST00000413879 PIAS4Q8N2W9 510 aaPredicted RBP17.41■□□□□ 0.38
AC004987.3-201ENST00000413879 PPP6R1Q9UPN7 881 aa17.23■□□□□ 0.35
AC004987.3-201ENST00000413879 ADRA2BP18089 450 aa17.2■□□□□ 0.34
AC004987.3-201ENST00000413879 MAPK8IP2Q13387 824 aaPredicted RBP15.89■□□□□ 0.13
AC004987.3-201ENST00000413879 SCAF1Q9H7N4 1312 aaKnown RBP15.8■□□□□ 0.12
AC004987.3-201ENST00000413879 DMRT2Q9Y5R5 561 aa15.78■□□□□ 0.12
AC004987.3-201ENST00000413879 CACNB1Q02641 598 aaPredicted RBP15.34■□□□□ 0.05
AC004987.3-201ENST00000413879 DCAF8L1A6NGE4 600 aa15.31■□□□□ 0.04
AC004987.3-201ENST00000413879 PPP4R3CPQ6ZMV5 832 aa15.24■□□□□ 0.03
AC004987.3-201ENST00000413879 HOXD11P31277 338 aaPredicted RBP15.08■□□□□ 0
AC004987.3-201ENST00000413879 CNKSR2Q8WXI2 1034 aa15.02■□□□□ -0
AC004987.3-201ENST00000413879 RNF39Q9H2S5 420 aa14.95□□□□□ -0.02
AC004987.3-201ENST00000413879 RNF216Q9NWF9 866 aaPredicted RBP14.93□□□□□ -0.02
AC004987.3-201ENST00000413879 C1QBPQ07021 282 aaKnown RBP14.75□□□□□ -0.05
AC004987.3-201ENST00000413879 NCBP3Q53F19 620 aaKnown RBP14.62□□□□□ -0.07
AC004987.3-201ENST00000413879 DNAJC5BQ9UF47 199 aa14.6□□□□□ -0.07
AC004987.3-201ENST00000413879 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.49□□□□□ -0.09
AC004987.3-201ENST00000413879 NPM3O75607 178 aaKnown RBP14.32□□□□□ -0.12
AC004987.3-201ENST00000413879 U3KPZ7 1027 aaPredicted RBP14.05□□□□□ -0.16
AC004987.3-201ENST00000413879 CAPN15O75808 1086 aa14.03□□□□□ -0.16
AC004987.3-201ENST00000413879 SPINK5Q9NQ38 1064 aaPredicted RBP13.97□□□□□ -0.17
AC004987.3-201ENST00000413879 DSG3P32926 999 aa13.93□□□□□ -0.18
AC004987.3-201ENST00000413879 KCNA4P22459 653 aa13.81□□□□□ -0.2
AC004987.3-201ENST00000413879 POTEHQ6S545 545 aa13.79□□□□□ -0.2
AC004987.3-201ENST00000413879 TRHP20396 242 aaPredicted RBP13.75□□□□□ -0.21
AC004987.3-201ENST00000413879 SLC4A2P04920 1241 aa13.73□□□□□ -0.21
AC004987.3-201ENST00000413879 APLP2Q06481 763 aa13.72□□□□□ -0.21
AC004987.3-201ENST00000413879 ABCB7O75027 752 aa13.65□□□□□ -0.22
AC004987.3-201ENST00000413879 ZNF219Q9P2Y4 722 aaPredicted RBP13.65□□□□□ -0.22
AC004987.3-201ENST00000413879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.63□□□□□ -0.23
AC004987.3-201ENST00000413879 HNRNPUL2Q1KMD3 747 aaKnown RBP13.63□□□□□ -0.23
AC004987.3-201ENST00000413879 SAMD1Q6SPF0 538 aaPredicted RBP13.52□□□□□ -0.25
AC004987.3-201ENST00000413879 RBM42Q9BTD8 480 aaKnown RBP13.34□□□□□ -0.27
AC004987.3-201ENST00000413879 MYCNP04198 464 aaPredicted RBP13.28□□□□□ -0.28
AC004987.3-201ENST00000413879 POLA2Q14181 598 aa13.28□□□□□ -0.28
AC004987.3-201ENST00000413879 CHRDL2Q6WN34 429 aa13.14□□□□□ -0.31
AC004987.3-201ENST00000413879 SLC4A1APQ9BWU0 796 aaKnown RBP13.02□□□□□ -0.33
AC004987.3-201ENST00000413879 FOXD4L1Q9NU39 408 aa12.98□□□□□ -0.33
AC004987.3-201ENST00000413879 ATF5Q9Y2D1 282 aaPredicted RBP12.97□□□□□ -0.33
AC004987.3-201ENST00000413879 AKT1S1Q96B36 256 aa12.96□□□□□ -0.33
AC004987.3-201ENST00000413879 ZBTB12Q9Y330 459 aaPredicted RBP12.96□□□□□ -0.33
AC004987.3-201ENST00000413879 REM2Q8IYK8 340 aaPredicted RBP12.84□□□□□ -0.35
AC004987.3-201ENST00000413879 OSCARQ8IYS5 282 aa12.81□□□□□ -0.36
AC004987.3-201ENST00000413879 SP7Q8TDD2 431 aaPredicted RBP12.79□□□□□ -0.36
AC004987.3-201ENST00000413879 PIP4P2Q8N4L2 257 aa12.75□□□□□ -0.37
AC004987.3-201ENST00000413879 HAX1O00165 279 aa12.7□□□□□ -0.38
AC004987.3-201ENST00000413879 PITPNM1O00562 1244 aa12.68□□□□□ -0.38
AC004987.3-201ENST00000413879 ZBTB22O15209 634 aa12.63□□□□□ -0.39
AC004987.3-201ENST00000413879 FXR2P51116 673 aaKnown RBP eCLIP12.62□□□□□ -0.39
AC004987.3-201ENST00000413879 ATXN8OSP0DMR3 200 aa12.61□□□□□ -0.39
AC004987.3-201ENST00000413879 FBLN2P98095 1184 aa12.57□□□□□ -0.4
AC004987.3-201ENST00000413879 SPDYE2BA6NHP3 402 aa12.53□□□□□ -0.4
AC004987.3-201ENST00000413879 SPDYE6P0CI01 402 aa12.53□□□□□ -0.4
AC004987.3-201ENST00000413879 SPDYE2Q495Y8 402 aa12.53□□□□□ -0.4
AC004987.3-201ENST00000413879 CLEC11AQ9Y240 323 aa12.47□□□□□ -0.41
AC004987.3-201ENST00000413879 EVX2Q03828 476 aa12.41□□□□□ -0.42
AC004987.3-201ENST00000413879 PRKAR2AP13861 404 aaKnown RBP12.4□□□□□ -0.42
AC004987.3-201ENST00000413879 SPDYE1Q8NFV5 336 aaPredicted RBP12.4□□□□□ -0.42
AC004987.3-201ENST00000413879 ZNF692Q9BU19 519 aaPredicted RBP12.4□□□□□ -0.42
AC004987.3-201ENST00000413879 MKRN4PQ13434 485 aaPredicted RBP12.33□□□□□ -0.44
AC004987.3-201ENST00000413879 SSUH2Q9Y2M2 353 aa12.26□□□□□ -0.45
AC004987.3-201ENST00000413879 C19orf67A6NJJ6 358 aa12.22□□□□□ -0.45
AC004987.3-201ENST00000413879 PRR29P0C7W0 189 aa12.21□□□□□ -0.45
AC004987.3-201ENST00000413879 CHADLQ6NUI6 762 aa12.21□□□□□ -0.45
AC004987.3-201ENST00000413879 PABPN1Q86U42 306 aaKnown RBP eCLIP12.17□□□□□ -0.46
AC004987.3-201ENST00000413879 GABBR2O75899 941 aa12.15□□□□□ -0.46
AC004987.3-201ENST00000413879 LHX8Q68G74 356 aa12.03□□□□□ -0.48
AC004987.3-201ENST00000413879 CD44P16070 742 aaKnown RBP11.98□□□□□ -0.49
AC004987.3-201ENST00000413879 FARP1Q9Y4F1 1045 aaPredicted RBP11.97□□□□□ -0.49
AC004987.3-201ENST00000413879 CLCN6P51797 869 aa11.88□□□□□ -0.51
AC004987.3-201ENST00000413879 CSRNP3Q8WYN3 585 aa11.85□□□□□ -0.51
AC004987.3-201ENST00000413879 POTEIP0CG38 1075 aa11.84□□□□□ -0.51
AC004987.3-201ENST00000413879 DCBLD2Q96PD2 775 aa11.84□□□□□ -0.51
AC004987.3-201ENST00000413879 ZRANB1Q9UGI0 708 aa11.8□□□□□ -0.52
AC004987.3-201ENST00000413879 STAG3Q9UJ98 1225 aa11.8□□□□□ -0.52
AC004987.3-201ENST00000413879 CREBZFQ9NS37 354 aa11.74□□□□□ -0.53
AC004987.3-201ENST00000413879 ZNF579Q8NAF0 562 aaKnown RBP11.73□□□□□ -0.53
AC004987.3-201ENST00000413879 SPDYE4A6NLX3 237 aa11.69□□□□□ -0.54
AC004987.3-201ENST00000413879 PAK3O75914 559 aaPredicted RBP11.68□□□□□ -0.54
AC004987.3-201ENST00000413879 GALR2O43603 387 aaPredicted RBP11.63□□□□□ -0.55
AC004987.3-201ENST00000413879 NPM1P06748 294 aaKnown RBP eCLIP11.61□□□□□ -0.55
AC004987.3-201ENST00000413879 EHMT2Q96KQ7 1210 aa11.61□□□□□ -0.55
AC004987.3-201ENST00000413879 PHF12Q96QT6 1004 aa11.57□□□□□ -0.56
AC004987.3-201ENST00000413879 PLSCR2Q9NRY7 297 aa11.55□□□□□ -0.56
AC004987.3-201ENST00000413879 OTUD5Q96G74 571 aa11.49□□□□□ -0.57
AC004987.3-201ENST00000413879 POTEB2H3BUK9 544 aa11.46□□□□□ -0.57
AC004987.3-201ENST00000413879 MNX1P50219 401 aaPredicted RBP11.46□□□□□ -0.57
AC004987.3-201ENST00000413879 PELP1Q8IZL8 1130 aaKnown RBP11.42□□□□□ -0.58
AC004987.3-201ENST00000413879 TSPYL2Q9H2G4 693 aaPredicted RBP11.39□□□□□ -0.59
AC004987.3-201ENST00000413879 MS4A3Q96HJ5 214 aa11.38□□□□□ -0.59
AC004987.3-201ENST00000413879 METRNQ9UJH8 293 aa11.36□□□□□ -0.59
AC004987.3-201ENST00000413879 ASTLQ6HA08 431 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms