RNA–Protein interactions for RNA: ENST00000413632.6

LMNTD1-202, Transcript of lamin tail domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LMNTD1, Length 1,520 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD1-202ENST00000413632 AEBP2Q6ZN18 517 aaPredicted RBP24.4■■□□□ 1.5
LMNTD1-202ENST00000413632 CHIC1Q5VXU3 224 aa23.56■■□□□ 1.36
LMNTD1-202ENST00000413632 SENP3Q9H4L4 574 aaPredicted RBP20.82■□□□□ 0.92
LMNTD1-202ENST00000413632 PHF23Q9BUL5 403 aaPredicted RBP20.66■□□□□ 0.9
LMNTD1-202ENST00000413632 FOXD1Q16676 465 aa19.31■□□□□ 0.68
LMNTD1-202ENST00000413632 PLPPR3Q6T4P5 718 aa19.02■□□□□ 0.64
LMNTD1-202ENST00000413632 POTEDQ86YR6 584 aa18.59■□□□□ 0.57
LMNTD1-202ENST00000413632 PPP6R1Q9UPN7 881 aa18.33■□□□□ 0.52
LMNTD1-202ENST00000413632 ADRA2BP18089 450 aa18.32■□□□□ 0.52
LMNTD1-202ENST00000413632 PIAS4Q8N2W9 510 aaPredicted RBP18.18■□□□□ 0.5
LMNTD1-202ENST00000413632 MSH5O43196 834 aa17.98■□□□□ 0.47
LMNTD1-202ENST00000413632 SCAF1Q9H7N4 1312 aaKnown RBP16.81■□□□□ 0.28
LMNTD1-202ENST00000413632 PPP4R3CPQ6ZMV5 832 aa16.71■□□□□ 0.27
LMNTD1-202ENST00000413632 MAPK8IP2Q13387 824 aaPredicted RBP16.7■□□□□ 0.26
LMNTD1-202ENST00000413632 DMRT2Q9Y5R5 561 aa16.55■□□□□ 0.24
LMNTD1-202ENST00000413632 CNKSR2Q8WXI2 1034 aa16.32■□□□□ 0.2
LMNTD1-202ENST00000413632 NCBP3Q53F19 620 aaKnown RBP16.22■□□□□ 0.19
LMNTD1-202ENST00000413632 HOXD11P31277 338 aaPredicted RBP16.07■□□□□ 0.16
LMNTD1-202ENST00000413632 RNF216Q9NWF9 866 aaPredicted RBP16.07■□□□□ 0.16
LMNTD1-202ENST00000413632 KCNA4P22459 653 aa15.97■□□□□ 0.15
LMNTD1-202ENST00000413632 NPM3O75607 178 aaKnown RBP15.94■□□□□ 0.14
LMNTD1-202ENST00000413632 DCAF8L1A6NGE4 600 aa15.89■□□□□ 0.13
LMNTD1-202ENST00000413632 DNAJC5BQ9UF47 199 aa15.5■□□□□ 0.07
LMNTD1-202ENST00000413632 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.37■□□□□ 0.05
LMNTD1-202ENST00000413632 RNF39Q9H2S5 420 aa15.34■□□□□ 0.05
LMNTD1-202ENST00000413632 CACNB1Q02641 598 aaPredicted RBP15.23■□□□□ 0.03
LMNTD1-202ENST00000413632 SLC4A1APQ9BWU0 796 aaKnown RBP15.17■□□□□ 0.02
LMNTD1-202ENST00000413632 C1QBPQ07021 282 aaKnown RBP15.17■□□□□ 0.02
LMNTD1-202ENST00000413632 SLC4A2P04920 1241 aa15.11■□□□□ 0.01
LMNTD1-202ENST00000413632 U3KPZ7 1027 aaPredicted RBP15.04■□□□□ -0
LMNTD1-202ENST00000413632 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.8□□□□□ -0.04
LMNTD1-202ENST00000413632 HNRNPUL2Q1KMD3 747 aaKnown RBP14.8□□□□□ -0.04
LMNTD1-202ENST00000413632 FOXD4L1Q9NU39 408 aa14.8□□□□□ -0.04
LMNTD1-202ENST00000413632 MYCNP04198 464 aaPredicted RBP14.76□□□□□ -0.05
LMNTD1-202ENST00000413632 APLP2Q06481 763 aa14.73□□□□□ -0.05
LMNTD1-202ENST00000413632 SAMD1Q6SPF0 538 aaPredicted RBP14.72□□□□□ -0.05
LMNTD1-202ENST00000413632 SPINK5Q9NQ38 1064 aaPredicted RBP14.71□□□□□ -0.05
LMNTD1-202ENST00000413632 CAPN15O75808 1086 aa14.71□□□□□ -0.06
LMNTD1-202ENST00000413632 ZBTB22O15209 634 aa14.66□□□□□ -0.06
LMNTD1-202ENST00000413632 TRHP20396 242 aaPredicted RBP14.56□□□□□ -0.08
LMNTD1-202ENST00000413632 ZNF219Q9P2Y4 722 aaPredicted RBP14.55□□□□□ -0.08
LMNTD1-202ENST00000413632 DSG3P32926 999 aa14.49□□□□□ -0.09
LMNTD1-202ENST00000413632 EHMT2Q96KQ7 1210 aa14.4□□□□□ -0.1
LMNTD1-202ENST00000413632 ABCB7O75027 752 aa14.39□□□□□ -0.11
LMNTD1-202ENST00000413632 ATF5Q9Y2D1 282 aaPredicted RBP14.34□□□□□ -0.11
LMNTD1-202ENST00000413632 CSRNP3Q8WYN3 585 aa14.33□□□□□ -0.12
LMNTD1-202ENST00000413632 POTEHQ6S545 545 aa14.32□□□□□ -0.12
LMNTD1-202ENST00000413632 ATXN8OSP0DMR3 200 aa14.31□□□□□ -0.12
LMNTD1-202ENST00000413632 POLA2Q14181 598 aa14.24□□□□□ -0.13
LMNTD1-202ENST00000413632 ZBTB12Q9Y330 459 aaPredicted RBP14.02□□□□□ -0.16
LMNTD1-202ENST00000413632 RBM42Q9BTD8 480 aaKnown RBP13.88□□□□□ -0.19
LMNTD1-202ENST00000413632 FBLN2P98095 1184 aa13.84□□□□□ -0.19
LMNTD1-202ENST00000413632 OSCARQ8IYS5 282 aa13.77□□□□□ -0.21
LMNTD1-202ENST00000413632 MKRN4PQ13434 485 aaPredicted RBP13.71□□□□□ -0.21
LMNTD1-202ENST00000413632 AKT1S1Q96B36 256 aa13.61□□□□□ -0.23
LMNTD1-202ENST00000413632 SPDYE2BA6NHP3 402 aa13.59□□□□□ -0.23
LMNTD1-202ENST00000413632 SPDYE6P0CI01 402 aa13.59□□□□□ -0.23
LMNTD1-202ENST00000413632 SPDYE2Q495Y8 402 aa13.59□□□□□ -0.23
LMNTD1-202ENST00000413632 ZNF692Q9BU19 519 aaPredicted RBP13.49□□□□□ -0.25
LMNTD1-202ENST00000413632 REM2Q8IYK8 340 aaPredicted RBP13.47□□□□□ -0.25
LMNTD1-202ENST00000413632 SSUH2Q9Y2M2 353 aa13.43□□□□□ -0.26
LMNTD1-202ENST00000413632 CHRDL2Q6WN34 429 aa13.39□□□□□ -0.27
LMNTD1-202ENST00000413632 PITPNM1O00562 1244 aa13.33□□□□□ -0.28
LMNTD1-202ENST00000413632 PABPN1Q86U42 306 aaKnown RBP eCLIP13.3□□□□□ -0.28
LMNTD1-202ENST00000413632 SPDYE4A6NLX3 237 aa13.29□□□□□ -0.28
LMNTD1-202ENST00000413632 SPDYE1Q8NFV5 336 aaPredicted RBP13.28□□□□□ -0.28
LMNTD1-202ENST00000413632 CLEC11AQ9Y240 323 aa13.23□□□□□ -0.29
LMNTD1-202ENST00000413632 PIP4P2Q8N4L2 257 aa13.14□□□□□ -0.31
LMNTD1-202ENST00000413632 FXR2P51116 673 aaKnown RBP eCLIP13.12□□□□□ -0.31
LMNTD1-202ENST00000413632 PRR29P0C7W0 189 aa13.07□□□□□ -0.32
LMNTD1-202ENST00000413632 STAG3Q9UJ98 1225 aa13.03□□□□□ -0.32
LMNTD1-202ENST00000413632 FKBP8Q14318 412 aa13.01□□□□□ -0.33
LMNTD1-202ENST00000413632 PRKAR2AP13861 404 aaKnown RBP12.99□□□□□ -0.33
LMNTD1-202ENST00000413632 PROM2Q8N271 834 aa12.98□□□□□ -0.33
LMNTD1-202ENST00000413632 CHADLQ6NUI6 762 aa12.91□□□□□ -0.34
LMNTD1-202ENST00000413632 SP7Q8TDD2 431 aaPredicted RBP12.84□□□□□ -0.35
LMNTD1-202ENST00000413632 HAX1O00165 279 aa12.83□□□□□ -0.35
LMNTD1-202ENST00000413632 CREBZFQ9NS37 354 aa12.79□□□□□ -0.36
LMNTD1-202ENST00000413632 FARP1Q9Y4F1 1045 aaPredicted RBP12.78□□□□□ -0.36
LMNTD1-202ENST00000413632 C19orf67A6NJJ6 358 aa12.68□□□□□ -0.38
LMNTD1-202ENST00000413632 PLEKHG5O94827 1062 aa12.66□□□□□ -0.38
LMNTD1-202ENST00000413632 MIER1Q8N108 512 aa12.66□□□□□ -0.38
LMNTD1-202ENST00000413632 FBXO3Q9UK99 471 aa12.66□□□□□ -0.38
LMNTD1-202ENST00000413632 EVX2Q03828 476 aa12.64□□□□□ -0.39
LMNTD1-202ENST00000413632 NPM1P06748 294 aaKnown RBP eCLIP12.62□□□□□ -0.39
LMNTD1-202ENST00000413632 PLCD3Q8N3E9 789 aa12.62□□□□□ -0.39
LMNTD1-202ENST00000413632 CD44P16070 742 aaKnown RBP12.61□□□□□ -0.39
LMNTD1-202ENST00000413632 MNX1P50219 401 aaPredicted RBP12.6□□□□□ -0.39
LMNTD1-202ENST00000413632 PAK3O75914 559 aaPredicted RBP12.51□□□□□ -0.41
LMNTD1-202ENST00000413632 ZBTB47Q9UFB7 747 aaPredicted RBP12.51□□□□□ -0.41
LMNTD1-202ENST00000413632 ZRANB1Q9UGI0 708 aa12.49□□□□□ -0.41
LMNTD1-202ENST00000413632 VASPP50552 380 aaPredicted RBP12.47□□□□□ -0.41
LMNTD1-202ENST00000413632 ZNF579Q8NAF0 562 aaKnown RBP12.42□□□□□ -0.42
LMNTD1-202ENST00000413632 GABBR2O75899 941 aa12.41□□□□□ -0.42
LMNTD1-202ENST00000413632 TSPYL2Q9H2G4 693 aaPredicted RBP12.39□□□□□ -0.43
LMNTD1-202ENST00000413632 CLCN6P51797 869 aa12.37□□□□□ -0.43
LMNTD1-202ENST00000413632 RASEFQ8IZ41 740 aa12.36□□□□□ -0.43
LMNTD1-202ENST00000413632 KLHL34Q8N239 644 aa12.36□□□□□ -0.43
LMNTD1-202ENST00000413632 AMER1Q5JTC6 1135 aaPredicted RBP12.35□□□□□ -0.43
LMNTD1-202ENST00000413632 RTN4Q9NQC3 1192 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 189.7 ms