RNA–Protein interactions for RNA: ENST00000413382.6

PSMA4-202, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PSMA4, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-202ENST00000413382 AEBP2Q6ZN18 517 aaPredicted RBP21.23■□□□□ 0.99
PSMA4-202ENST00000413382 CHIC1Q5VXU3 224 aa20.53■□□□□ 0.88
PSMA4-202ENST00000413382 SENP3Q9H4L4 574 aaPredicted RBP18.23■□□□□ 0.51
PSMA4-202ENST00000413382 PHF23Q9BUL5 403 aaPredicted RBP17.98■□□□□ 0.47
PSMA4-202ENST00000413382 FOXD1Q16676 465 aa16.85■□□□□ 0.29
PSMA4-202ENST00000413382 PLPPR3Q6T4P5 718 aa16.61■□□□□ 0.25
PSMA4-202ENST00000413382 ADRA2BP18089 450 aa15.94■□□□□ 0.14
PSMA4-202ENST00000413382 PPP6R1Q9UPN7 881 aa15.92■□□□□ 0.14
PSMA4-202ENST00000413382 PIAS4Q8N2W9 510 aaPredicted RBP15.91■□□□□ 0.14
PSMA4-202ENST00000413382 MSH5O43196 834 aa15.8■□□□□ 0.12
PSMA4-202ENST00000413382 POTEDQ86YR6 584 aa14.83□□□□□ -0.04
PSMA4-202ENST00000413382 SCAF1Q9H7N4 1312 aaKnown RBP14.77□□□□□ -0.04
PSMA4-202ENST00000413382 PPP4R3CPQ6ZMV5 832 aa14.55□□□□□ -0.08
PSMA4-202ENST00000413382 MAPK8IP2Q13387 824 aaPredicted RBP14.53□□□□□ -0.08
PSMA4-202ENST00000413382 DMRT2Q9Y5R5 561 aa14.45□□□□□ -0.1
PSMA4-202ENST00000413382 CNKSR2Q8WXI2 1034 aa14.25□□□□□ -0.13
PSMA4-202ENST00000413382 NCBP3Q53F19 620 aaKnown RBP14.2□□□□□ -0.14
PSMA4-202ENST00000413382 RNF216Q9NWF9 866 aaPredicted RBP14.03□□□□□ -0.16
PSMA4-202ENST00000413382 HOXD11P31277 338 aaPredicted RBP14.01□□□□□ -0.17
PSMA4-202ENST00000413382 DCAF8L1A6NGE4 600 aa13.95□□□□□ -0.18
PSMA4-202ENST00000413382 NPM3O75607 178 aaKnown RBP13.84□□□□□ -0.19
PSMA4-202ENST00000413382 KCNA4P22459 653 aa13.8□□□□□ -0.2
PSMA4-202ENST00000413382 DNAJC5BQ9UF47 199 aa13.53□□□□□ -0.24
PSMA4-202ENST00000413382 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.47□□□□□ -0.252e-9■■■■■ 28.3
PSMA4-202ENST00000413382 RNF39Q9H2S5 420 aa13.41□□□□□ -0.26
PSMA4-202ENST00000413382 CACNB1Q02641 598 aaPredicted RBP13.39□□□□□ -0.27
PSMA4-202ENST00000413382 C1QBPQ07021 282 aaKnown RBP13.32□□□□□ -0.28
PSMA4-202ENST00000413382 SLC4A1APQ9BWU0 796 aaKnown RBP13.17□□□□□ -0.3
PSMA4-202ENST00000413382 SLC4A2P04920 1241 aa13.09□□□□□ -0.31
PSMA4-202ENST00000413382 U3KPZ7 1027 aaPredicted RBP13.09□□□□□ -0.31
PSMA4-202ENST00000413382 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13□□□□□ -0.33
PSMA4-202ENST00000413382 HNRNPUL2Q1KMD3 747 aaKnown RBP13□□□□□ -0.33
PSMA4-202ENST00000413382 APLP2Q06481 763 aa12.99□□□□□ -0.33
PSMA4-202ENST00000413382 SAMD1Q6SPF0 538 aaPredicted RBP12.9□□□□□ -0.34
PSMA4-202ENST00000413382 CAPN15O75808 1086 aa12.89□□□□□ -0.35
PSMA4-202ENST00000413382 MYCNP04198 464 aaPredicted RBP12.88□□□□□ -0.35
PSMA4-202ENST00000413382 FOXD4L1Q9NU39 408 aa12.88□□□□□ -0.35
PSMA4-202ENST00000413382 SPINK5Q9NQ38 1064 aaPredicted RBP12.81□□□□□ -0.36
PSMA4-202ENST00000413382 ZNF219Q9P2Y4 722 aaPredicted RBP12.77□□□□□ -0.37
PSMA4-202ENST00000413382 TRHP20396 242 aaPredicted RBP12.74□□□□□ -0.37
PSMA4-202ENST00000413382 DSG3P32926 999 aa12.65□□□□□ -0.38
PSMA4-202ENST00000413382 ZBTB22O15209 634 aa12.62□□□□□ -0.39
PSMA4-202ENST00000413382 ABCB7O75027 752 aa12.56□□□□□ -0.4
PSMA4-202ENST00000413382 ATXN8OSP0DMR3 200 aa12.47□□□□□ -0.41
PSMA4-202ENST00000413382 POLA2Q14181 598 aa12.42□□□□□ -0.42
PSMA4-202ENST00000413382 EHMT2Q96KQ7 1210 aa12.42□□□□□ -0.42
PSMA4-202ENST00000413382 ATF5Q9Y2D1 282 aaPredicted RBP12.41□□□□□ -0.42
PSMA4-202ENST00000413382 CSRNP3Q8WYN3 585 aa12.34□□□□□ -0.43
PSMA4-202ENST00000413382 ZBTB12Q9Y330 459 aaPredicted RBP12.31□□□□□ -0.44
PSMA4-202ENST00000413382 RBM42Q9BTD8 480 aaKnown RBP12.21□□□□□ -0.45
PSMA4-202ENST00000413382 FBLN2P98095 1184 aa12.12□□□□□ -0.47
PSMA4-202ENST00000413382 OSCARQ8IYS5 282 aa12□□□□□ -0.49
PSMA4-202ENST00000413382 AKT1S1Q96B36 256 aa11.93□□□□□ -0.5
PSMA4-202ENST00000413382 SPDYE2BA6NHP3 402 aa11.89□□□□□ -0.51
PSMA4-202ENST00000413382 SPDYE6P0CI01 402 aa11.89□□□□□ -0.51
PSMA4-202ENST00000413382 SPDYE2Q495Y8 402 aa11.89□□□□□ -0.51
PSMA4-202ENST00000413382 MKRN4PQ13434 485 aaPredicted RBP11.86□□□□□ -0.51
PSMA4-202ENST00000413382 ZNF692Q9BU19 519 aaPredicted RBP11.8□□□□□ -0.52
PSMA4-202ENST00000413382 REM2Q8IYK8 340 aaPredicted RBP11.77□□□□□ -0.53
PSMA4-202ENST00000413382 CHRDL2Q6WN34 429 aa11.74□□□□□ -0.53
PSMA4-202ENST00000413382 POTEHQ6S545 545 aa11.73□□□□□ -0.53
PSMA4-202ENST00000413382 SSUH2Q9Y2M2 353 aa11.68□□□□□ -0.54
PSMA4-202ENST00000413382 SPDYE1Q8NFV5 336 aaPredicted RBP11.63□□□□□ -0.55
PSMA4-202ENST00000413382 PITPNM1O00562 1244 aa11.62□□□□□ -0.55
PSMA4-202ENST00000413382 PABPN1Q86U42 306 aaKnown RBP eCLIP11.6□□□□□ -0.55
PSMA4-202ENST00000413382 CLEC11AQ9Y240 323 aa11.6□□□□□ -0.55
PSMA4-202ENST00000413382 SPDYE4A6NLX3 237 aa11.57□□□□□ -0.56
PSMA4-202ENST00000413382 PIP4P2Q8N4L2 257 aa11.49□□□□□ -0.57
PSMA4-202ENST00000413382 FXR2P51116 673 aaKnown RBP eCLIP11.46□□□□□ -0.574e-7■□□□□ 8.7
PSMA4-202ENST00000413382 PRR29P0C7W0 189 aa11.45□□□□□ -0.58
PSMA4-202ENST00000413382 STAG3Q9UJ98 1225 aa11.44□□□□□ -0.58
PSMA4-202ENST00000413382 PRKAR2AP13861 404 aaKnown RBP11.37□□□□□ -0.59
PSMA4-202ENST00000413382 HAX1O00165 279 aa11.29□□□□□ -0.6
PSMA4-202ENST00000413382 FKBP8Q14318 412 aa11.27□□□□□ -0.61
PSMA4-202ENST00000413382 CHADLQ6NUI6 762 aa11.27□□□□□ -0.61
PSMA4-202ENST00000413382 PROM2Q8N271 834 aa11.23□□□□□ -0.61
PSMA4-202ENST00000413382 PLEKHG5O94827 1062 aa11.15□□□□□ -0.62
PSMA4-202ENST00000413382 FARP1Q9Y4F1 1045 aaPredicted RBP11.15□□□□□ -0.62
PSMA4-202ENST00000413382 SP7Q8TDD2 431 aaPredicted RBP11.13□□□□□ -0.63
PSMA4-202ENST00000413382 CREBZFQ9NS37 354 aa11.12□□□□□ -0.63
PSMA4-202ENST00000413382 C19orf67A6NJJ6 358 aa11.09□□□□□ -0.63
PSMA4-202ENST00000413382 NPM1P06748 294 aaKnown RBP eCLIP11.09□□□□□ -0.63
PSMA4-202ENST00000413382 FBXO3Q9UK99 471 aa11.06□□□□□ -0.64
PSMA4-202ENST00000413382 MIER1Q8N108 512 aa11.05□□□□□ -0.64
PSMA4-202ENST00000413382 CD44P16070 742 aaKnown RBP11.04□□□□□ -0.64
PSMA4-202ENST00000413382 PLCD3Q8N3E9 789 aa11.03□□□□□ -0.64
PSMA4-202ENST00000413382 PAK3O75914 559 aaPredicted RBP11.02□□□□□ -0.65
PSMA4-202ENST00000413382 EVX2Q03828 476 aa10.99□□□□□ -0.65
PSMA4-202ENST00000413382 ZBTB47Q9UFB7 747 aaPredicted RBP10.98□□□□□ -0.65
PSMA4-202ENST00000413382 ZRANB1Q9UGI0 708 aa10.94□□□□□ -0.66
PSMA4-202ENST00000413382 MNX1P50219 401 aaPredicted RBP10.92□□□□□ -0.66
PSMA4-202ENST00000413382 CLCN6P51797 869 aa10.92□□□□□ -0.66
PSMA4-202ENST00000413382 GABBR2O75899 941 aa10.87□□□□□ -0.67
PSMA4-202ENST00000413382 ZNF579Q8NAF0 562 aaKnown RBP10.85□□□□□ -0.67
PSMA4-202ENST00000413382 VASPP50552 380 aaPredicted RBP10.81□□□□□ -0.68
PSMA4-202ENST00000413382 TSPYL2Q9H2G4 693 aaPredicted RBP10.81□□□□□ -0.68
PSMA4-202ENST00000413382 KLHL34Q8N239 644 aa10.8□□□□□ -0.68
PSMA4-202ENST00000413382 FAM212AQ96EL1 285 aa10.74□□□□□ -0.69
PSMA4-202ENST00000413382 DCBLD2Q96PD2 775 aa10.74□□□□□ -0.69
PSMA4-202ENST00000413382 PHF12Q96QT6 1004 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms