RNA–Protein interactions for RNA: ENST00000412870.1

CASKP1-201, Transcript of calcium/calmodulin dependent serine protein kinase pseudogene 1, humanhuman

BASIC

Gene CASKP1, Length 582 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASKP1-201ENST00000412870 AEBP2Q6ZN18 517 aaPredicted RBP32.82■■■□□ 2.84
CASKP1-201ENST00000412870 CHIC1Q5VXU3 224 aa30.62■■■□□ 2.49
CASKP1-201ENST00000412870 SENP3Q9H4L4 574 aaPredicted RBP27.88■■■□□ 2.05
CASKP1-201ENST00000412870 PHF23Q9BUL5 403 aaPredicted RBP27.54■■■□□ 2
CASKP1-201ENST00000412870 FOXD1Q16676 465 aa26.17■■□□□ 1.78
CASKP1-201ENST00000412870 POTEDQ86YR6 584 aa24.83■■□□□ 1.57
CASKP1-201ENST00000412870 MSH5O43196 834 aa24.5■■□□□ 1.51
CASKP1-201ENST00000412870 PIAS4Q8N2W9 510 aaPredicted RBP24.3■■□□□ 1.48
CASKP1-201ENST00000412870 PLPPR3Q6T4P5 718 aa24.19■■□□□ 1.46
CASKP1-201ENST00000412870 PPP6R1Q9UPN7 881 aa24.19■■□□□ 1.46
CASKP1-201ENST00000412870 ADRA2BP18089 450 aa24.07■■□□□ 1.44
CASKP1-201ENST00000412870 MAPK8IP2Q13387 824 aaPredicted RBP22.27■■□□□ 1.16
CASKP1-201ENST00000412870 DMRT2Q9Y5R5 561 aa22.08■■□□□ 1.13
CASKP1-201ENST00000412870 SCAF1Q9H7N4 1312 aaKnown RBP21.78■■□□□ 1.08
CASKP1-201ENST00000412870 CACNB1Q02641 598 aaPredicted RBP21.37■■□□□ 1.01
CASKP1-201ENST00000412870 DCAF8L1A6NGE4 600 aa21.23■□□□□ 0.99
CASKP1-201ENST00000412870 PPP4R3CPQ6ZMV5 832 aa21.21■□□□□ 0.99
CASKP1-201ENST00000412870 HOXD11P31277 338 aaPredicted RBP21.09■□□□□ 0.97
CASKP1-201ENST00000412870 RNF39Q9H2S5 420 aa20.96■□□□□ 0.95
CASKP1-201ENST00000412870 CNKSR2Q8WXI2 1034 aa20.85■□□□□ 0.93
CASKP1-201ENST00000412870 RNF216Q9NWF9 866 aaPredicted RBP20.77■□□□□ 0.92
CASKP1-201ENST00000412870 C1QBPQ07021 282 aaKnown RBP20.54■□□□□ 0.88
CASKP1-201ENST00000412870 DNAJC5BQ9UF47 199 aa20.32■□□□□ 0.84
CASKP1-201ENST00000412870 NCBP3Q53F19 620 aaKnown RBP20.13■□□□□ 0.81
CASKP1-201ENST00000412870 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.08■□□□□ 0.81
CASKP1-201ENST00000412870 NPM3O75607 178 aaKnown RBP20■□□□□ 0.79
CASKP1-201ENST00000412870 KCNA4P22459 653 aa19.94■□□□□ 0.78
CASKP1-201ENST00000412870 U3KPZ7 1027 aaPredicted RBP19.69■□□□□ 0.74
CASKP1-201ENST00000412870 SPINK5Q9NQ38 1064 aaPredicted RBP19.58■□□□□ 0.72
CASKP1-201ENST00000412870 DSG3P32926 999 aa19.5■□□□□ 0.71
CASKP1-201ENST00000412870 CAPN15O75808 1086 aa19.48■□□□□ 0.71
CASKP1-201ENST00000412870 POTEHQ6S545 545 aa19.33■□□□□ 0.68
CASKP1-201ENST00000412870 EHMT2Q96KQ7 1210 aa19.33■□□□□ 0.68
CASKP1-201ENST00000412870 SLC4A2P04920 1241 aa19.26■□□□□ 0.67
CASKP1-201ENST00000412870 TRHP20396 242 aaPredicted RBP19.08■□□□□ 0.64
CASKP1-201ENST00000412870 ABCB7O75027 752 aa19.07■□□□□ 0.64
CASKP1-201ENST00000412870 SLC4A1APQ9BWU0 796 aaKnown RBP19.06■□□□□ 0.64
CASKP1-201ENST00000412870 ZNF219Q9P2Y4 722 aaPredicted RBP18.92■□□□□ 0.62
CASKP1-201ENST00000412870 APLP2Q06481 763 aa18.84■□□□□ 0.61
CASKP1-201ENST00000412870 CSRNP3Q8WYN3 585 aa18.82■□□□□ 0.6
CASKP1-201ENST00000412870 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.76■□□□□ 0.59
CASKP1-201ENST00000412870 HNRNPUL2Q1KMD3 747 aaKnown RBP18.76■□□□□ 0.59
CASKP1-201ENST00000412870 SAMD1Q6SPF0 538 aaPredicted RBP18.69■□□□□ 0.58
CASKP1-201ENST00000412870 POLA2Q14181 598 aa18.46■□□□□ 0.55
CASKP1-201ENST00000412870 RBM42Q9BTD8 480 aaKnown RBP18.46■□□□□ 0.55
CASKP1-201ENST00000412870 MYCNP04198 464 aaPredicted RBP18.42■□□□□ 0.54
CASKP1-201ENST00000412870 ZBTB22O15209 634 aa18.41■□□□□ 0.54
CASKP1-201ENST00000412870 CHRDL2Q6WN34 429 aa18.36■□□□□ 0.53
CASKP1-201ENST00000412870 ATF5Q9Y2D1 282 aaPredicted RBP18.21■□□□□ 0.51
CASKP1-201ENST00000412870 FOXD4L1Q9NU39 408 aa18.11■□□□□ 0.49
CASKP1-201ENST00000412870 AKT1S1Q96B36 256 aa18■□□□□ 0.47
CASKP1-201ENST00000412870 OSCARQ8IYS5 282 aa17.94■□□□□ 0.46
CASKP1-201ENST00000412870 REM2Q8IYK8 340 aaPredicted RBP17.9■□□□□ 0.46
CASKP1-201ENST00000412870 SP7Q8TDD2 431 aaPredicted RBP17.9■□□□□ 0.46
CASKP1-201ENST00000412870 ZBTB12Q9Y330 459 aaPredicted RBP17.88■□□□□ 0.45
CASKP1-201ENST00000412870 PIP4P2Q8N4L2 257 aa17.86■□□□□ 0.45
CASKP1-201ENST00000412870 PITPNM1O00562 1244 aa17.76■□□□□ 0.43
CASKP1-201ENST00000412870 FXR2P51116 673 aaKnown RBP eCLIP17.64■□□□□ 0.41
CASKP1-201ENST00000412870 HAX1O00165 279 aa17.61■□□□□ 0.41
CASKP1-201ENST00000412870 EVX2Q03828 476 aa17.51■□□□□ 0.39
CASKP1-201ENST00000412870 ATXN8OSP0DMR3 200 aa17.41■□□□□ 0.38
CASKP1-201ENST00000412870 SPDYE2BA6NHP3 402 aa17.37■□□□□ 0.37
CASKP1-201ENST00000412870 SPDYE6P0CI01 402 aa17.37■□□□□ 0.37
CASKP1-201ENST00000412870 SPDYE2Q495Y8 402 aa17.37■□□□□ 0.37
CASKP1-201ENST00000412870 MKRN4PQ13434 485 aaPredicted RBP17.32■□□□□ 0.36
CASKP1-201ENST00000412870 FBLN2P98095 1184 aa17.31■□□□□ 0.36
CASKP1-201ENST00000412870 PRKAR2AP13861 404 aaKnown RBP17.26■□□□□ 0.35
CASKP1-201ENST00000412870 CLEC11AQ9Y240 323 aa17.26■□□□□ 0.35
CASKP1-201ENST00000412870 SPDYE1Q8NFV5 336 aaPredicted RBP17.17■□□□□ 0.34
CASKP1-201ENST00000412870 SSUH2Q9Y2M2 353 aa17.15■□□□□ 0.34
CASKP1-201ENST00000412870 ZNF692Q9BU19 519 aaPredicted RBP17.13■□□□□ 0.33
CASKP1-201ENST00000412870 C19orf67A6NJJ6 358 aa17.1■□□□□ 0.33
CASKP1-201ENST00000412870 CHADLQ6NUI6 762 aa17.05■□□□□ 0.32
CASKP1-201ENST00000412870 GABBR2O75899 941 aa16.98■□□□□ 0.31
CASKP1-201ENST00000412870 FKBP8Q14318 412 aa16.93■□□□□ 0.3
CASKP1-201ENST00000412870 PABPN1Q86U42 306 aaKnown RBP eCLIP16.9■□□□□ 0.3
CASKP1-201ENST00000412870 PRR29P0C7W0 189 aa16.85■□□□□ 0.29
CASKP1-201ENST00000412870 LHX8Q68G74 356 aa16.78■□□□□ 0.28
CASKP1-201ENST00000412870 POTEIP0CG38 1075 aa16.7■□□□□ 0.26
CASKP1-201ENST00000412870 CD44P16070 742 aaKnown RBP16.68■□□□□ 0.26
CASKP1-201ENST00000412870 FARP1Q9Y4F1 1045 aaPredicted RBP16.66■□□□□ 0.26
CASKP1-201ENST00000412870 RTN4Q9NQC3 1192 aaKnown RBP16.64■□□□□ 0.25
CASKP1-201ENST00000412870 AMER1Q5JTC6 1135 aaPredicted RBP16.57■□□□□ 0.24
CASKP1-201ENST00000412870 CREBZFQ9NS37 354 aa16.41■□□□□ 0.22
CASKP1-201ENST00000412870 ZRANB1Q9UGI0 708 aa16.38■□□□□ 0.21
CASKP1-201ENST00000412870 ZNF579Q8NAF0 562 aaKnown RBP16.37■□□□□ 0.21
CASKP1-201ENST00000412870 DCBLD2Q96PD2 775 aa16.36■□□□□ 0.21
CASKP1-201ENST00000412870 CLCN6P51797 869 aa16.33■□□□□ 0.2
CASKP1-201ENST00000412870 GALR2O43603 387 aaPredicted RBP16.3■□□□□ 0.2
CASKP1-201ENST00000412870 SPDYE4A6NLX3 237 aa16.25■□□□□ 0.19
CASKP1-201ENST00000412870 STAG3Q9UJ98 1225 aa16.2■□□□□ 0.18
CASKP1-201ENST00000412870 PHF12Q96QT6 1004 aa16.18■□□□□ 0.18
CASKP1-201ENST00000412870 POTEB2H3BUK9 544 aa16.16■□□□□ 0.18
CASKP1-201ENST00000412870 OTUD5Q96G74 571 aa16.13■□□□□ 0.17
CASKP1-201ENST00000412870 PROM2Q8N271 834 aa16.12■□□□□ 0.17
CASKP1-201ENST00000412870 PLSCR2Q9NRY7 297 aa16.11■□□□□ 0.17
CASKP1-201ENST00000412870 MNX1P50219 401 aaPredicted RBP16.09■□□□□ 0.17
CASKP1-201ENST00000412870 SLC24A1O60721 1099 aa16.08■□□□□ 0.16
CASKP1-201ENST00000412870 PELP1Q8IZL8 1130 aaKnown RBP16.06■□□□□ 0.16
CASKP1-201ENST00000412870 FBXO3Q9UK99 471 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms