RNA–Protein interactions for RNA: ENST00000412526.5

LINC00161-201, long intergenic non-protein coding RNA 161, humanhuman

TSL 2 BASIC

Gene LINC00161, Length 870 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00161-201ENST00000412526 AEBP2Q6ZN18 517 aaPredicted RBP26.29■■□□□ 1.8
LINC00161-201ENST00000412526 CHIC1Q5VXU3 224 aa24.79■■□□□ 1.56
LINC00161-201ENST00000412526 SENP3Q9H4L4 574 aaPredicted RBP22.3■■□□□ 1.16
LINC00161-201ENST00000412526 PHF23Q9BUL5 403 aaPredicted RBP22.1■■□□□ 1.13
LINC00161-201ENST00000412526 FOXD1Q16676 465 aa20.91■□□□□ 0.94
LINC00161-201ENST00000412526 PLPPR3Q6T4P5 718 aa19.71■□□□□ 0.75
LINC00161-201ENST00000412526 PPP6R1Q9UPN7 881 aa19.54■□□□□ 0.72
LINC00161-201ENST00000412526 MSH5O43196 834 aa19.48■□□□□ 0.71
LINC00161-201ENST00000412526 PIAS4Q8N2W9 510 aaPredicted RBP19.45■□□□□ 0.7
LINC00161-201ENST00000412526 ADRA2BP18089 450 aa19.43■□□□□ 0.7
LINC00161-201ENST00000412526 POTEDQ86YR6 584 aa19.3■□□□□ 0.68
LINC00161-201ENST00000412526 MAPK8IP2Q13387 824 aaPredicted RBP17.92■□□□□ 0.46
LINC00161-201ENST00000412526 DMRT2Q9Y5R5 561 aa17.71■□□□□ 0.43
LINC00161-201ENST00000412526 SCAF1Q9H7N4 1312 aaKnown RBP17.63■□□□□ 0.41
LINC00161-201ENST00000412526 PPP4R3CPQ6ZMV5 832 aa17.32■□□□□ 0.36
LINC00161-201ENST00000412526 HOXD11P31277 338 aaPredicted RBP17.03■□□□□ 0.32
LINC00161-201ENST00000412526 DCAF8L1A6NGE4 600 aa16.99■□□□□ 0.31
LINC00161-201ENST00000412526 CNKSR2Q8WXI2 1034 aa16.97■□□□□ 0.31
LINC00161-201ENST00000412526 RNF216Q9NWF9 866 aaPredicted RBP16.85■□□□□ 0.29
LINC00161-201ENST00000412526 CACNB1Q02641 598 aaPredicted RBP16.83■□□□□ 0.28
LINC00161-201ENST00000412526 RNF39Q9H2S5 420 aa16.68■□□□□ 0.26
LINC00161-201ENST00000412526 NCBP3Q53F19 620 aaKnown RBP16.53■□□□□ 0.24
LINC00161-201ENST00000412526 NPM3O75607 178 aaKnown RBP16.39■□□□□ 0.21
LINC00161-201ENST00000412526 C1QBPQ07021 282 aaKnown RBP16.39■□□□□ 0.21
LINC00161-201ENST00000412526 DNAJC5BQ9UF47 199 aa16.38■□□□□ 0.21
LINC00161-201ENST00000412526 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.2■□□□□ 0.18
LINC00161-201ENST00000412526 KCNA4P22459 653 aa16.17■□□□□ 0.18
LINC00161-201ENST00000412526 U3KPZ7 1027 aaPredicted RBP15.89■□□□□ 0.13
LINC00161-201ENST00000412526 SPINK5Q9NQ38 1064 aaPredicted RBP15.73■□□□□ 0.11
LINC00161-201ENST00000412526 SLC4A2P04920 1241 aa15.72■□□□□ 0.11
LINC00161-201ENST00000412526 CAPN15O75808 1086 aa15.64■□□□□ 0.09
LINC00161-201ENST00000412526 DSG3P32926 999 aa15.61■□□□□ 0.09
LINC00161-201ENST00000412526 SLC4A1APQ9BWU0 796 aaKnown RBP15.48■□□□□ 0.07
LINC00161-201ENST00000412526 TRHP20396 242 aaPredicted RBP15.39■□□□□ 0.05
LINC00161-201ENST00000412526 EHMT2Q96KQ7 1210 aa15.38■□□□□ 0.05
LINC00161-201ENST00000412526 ABCB7O75027 752 aa15.31■□□□□ 0.04
LINC00161-201ENST00000412526 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.27■□□□□ 0.04
LINC00161-201ENST00000412526 HNRNPUL2Q1KMD3 747 aaKnown RBP15.27■□□□□ 0.04
LINC00161-201ENST00000412526 APLP2Q06481 763 aa15.26■□□□□ 0.03
LINC00161-201ENST00000412526 ZNF219Q9P2Y4 722 aaPredicted RBP15.26■□□□□ 0.03
LINC00161-201ENST00000412526 SAMD1Q6SPF0 538 aaPredicted RBP15.21■□□□□ 0.03
LINC00161-201ENST00000412526 MYCNP04198 464 aaPredicted RBP15.08■□□□□ 0
LINC00161-201ENST00000412526 POTEHQ6S545 545 aa15.07■□□□□ 0
LINC00161-201ENST00000412526 CSRNP3Q8WYN3 585 aa15.02■□□□□ -0
LINC00161-201ENST00000412526 POLA2Q14181 598 aa14.97□□□□□ -0.01
LINC00161-201ENST00000412526 FOXD4L1Q9NU39 408 aa14.89□□□□□ -0.03
LINC00161-201ENST00000412526 ATF5Q9Y2D1 282 aaPredicted RBP14.89□□□□□ -0.03
LINC00161-201ENST00000412526 ZBTB22O15209 634 aa14.84□□□□□ -0.03
LINC00161-201ENST00000412526 RBM42Q9BTD8 480 aaKnown RBP14.77□□□□□ -0.05
LINC00161-201ENST00000412526 CHRDL2Q6WN34 429 aa14.57□□□□□ -0.08
LINC00161-201ENST00000412526 ZBTB12Q9Y330 459 aaPredicted RBP14.5□□□□□ -0.09
LINC00161-201ENST00000412526 AKT1S1Q96B36 256 aa14.47□□□□□ -0.09
LINC00161-201ENST00000412526 OSCARQ8IYS5 282 aa14.46□□□□□ -0.09
LINC00161-201ENST00000412526 ATXN8OSP0DMR3 200 aa14.42□□□□□ -0.1
LINC00161-201ENST00000412526 REM2Q8IYK8 340 aaPredicted RBP14.39□□□□□ -0.11
LINC00161-201ENST00000412526 PIP4P2Q8N4L2 257 aa14.24□□□□□ -0.13
LINC00161-201ENST00000412526 PITPNM1O00562 1244 aa14.23□□□□□ -0.13
LINC00161-201ENST00000412526 MKRN4PQ13434 485 aaPredicted RBP14.17□□□□□ -0.14
LINC00161-201ENST00000412526 FBLN2P98095 1184 aa14.15□□□□□ -0.14
LINC00161-201ENST00000412526 FXR2P51116 673 aaKnown RBP eCLIP14.13□□□□□ -0.15
LINC00161-201ENST00000412526 SPDYE2BA6NHP3 402 aa14.11□□□□□ -0.15
LINC00161-201ENST00000412526 SPDYE6P0CI01 402 aa14.11□□□□□ -0.15
LINC00161-201ENST00000412526 SPDYE2Q495Y8 402 aa14.11□□□□□ -0.15
LINC00161-201ENST00000412526 SP7Q8TDD2 431 aaPredicted RBP14.06□□□□□ -0.16
LINC00161-201ENST00000412526 HAX1O00165 279 aa13.99□□□□□ -0.17
LINC00161-201ENST00000412526 ZNF692Q9BU19 519 aaPredicted RBP13.98□□□□□ -0.17
LINC00161-201ENST00000412526 SSUH2Q9Y2M2 353 aa13.95□□□□□ -0.18
LINC00161-201ENST00000412526 EVX2Q03828 476 aa13.93□□□□□ -0.18
LINC00161-201ENST00000412526 CLEC11AQ9Y240 323 aa13.93□□□□□ -0.18
LINC00161-201ENST00000412526 SPDYE1Q8NFV5 336 aaPredicted RBP13.89□□□□□ -0.19
LINC00161-201ENST00000412526 PRKAR2AP13861 404 aaKnown RBP13.85□□□□□ -0.19
LINC00161-201ENST00000412526 PABPN1Q86U42 306 aaKnown RBP eCLIP13.78□□□□□ -0.2
LINC00161-201ENST00000412526 CHADLQ6NUI6 762 aa13.73□□□□□ -0.21
LINC00161-201ENST00000412526 C19orf67A6NJJ6 358 aa13.68□□□□□ -0.22
LINC00161-201ENST00000412526 PRR29P0C7W0 189 aa13.67□□□□□ -0.22
LINC00161-201ENST00000412526 FKBP8Q14318 412 aa13.6□□□□□ -0.23
LINC00161-201ENST00000412526 GABBR2O75899 941 aa13.52□□□□□ -0.25
LINC00161-201ENST00000412526 FARP1Q9Y4F1 1045 aaPredicted RBP13.47□□□□□ -0.25
LINC00161-201ENST00000412526 SPDYE4A6NLX3 237 aa13.38□□□□□ -0.27
LINC00161-201ENST00000412526 CD44P16070 742 aaKnown RBP13.38□□□□□ -0.27
LINC00161-201ENST00000412526 CREBZFQ9NS37 354 aa13.35□□□□□ -0.27
LINC00161-201ENST00000412526 STAG3Q9UJ98 1225 aa13.3□□□□□ -0.28
LINC00161-201ENST00000412526 POTEIP0CG38 1075 aa13.29□□□□□ -0.28
LINC00161-201ENST00000412526 LHX8Q68G74 356 aa13.22□□□□□ -0.29
LINC00161-201ENST00000412526 ZRANB1Q9UGI0 708 aa13.2□□□□□ -0.3
LINC00161-201ENST00000412526 ZNF579Q8NAF0 562 aaKnown RBP13.16□□□□□ -0.3
LINC00161-201ENST00000412526 CLCN6P51797 869 aa13.14□□□□□ -0.31
LINC00161-201ENST00000412526 MNX1P50219 401 aaPredicted RBP13.13□□□□□ -0.31
LINC00161-201ENST00000412526 GALR2O43603 387 aaPredicted RBP13.08□□□□□ -0.32
LINC00161-201ENST00000412526 DCBLD2Q96PD2 775 aa13.07□□□□□ -0.32
LINC00161-201ENST00000412526 FBXO3Q9UK99 471 aa13.07□□□□□ -0.32
LINC00161-201ENST00000412526 PROM2Q8N271 834 aa13.05□□□□□ -0.32
LINC00161-201ENST00000412526 PHF12Q96QT6 1004 aa13.03□□□□□ -0.32
LINC00161-201ENST00000412526 RTN4Q9NQC3 1192 aaKnown RBP13.01□□□□□ -0.33
LINC00161-201ENST00000412526 NPM1P06748 294 aaKnown RBP eCLIP13□□□□□ -0.33
LINC00161-201ENST00000412526 AMER1Q5JTC6 1135 aaPredicted RBP12.98□□□□□ -0.33
LINC00161-201ENST00000412526 PAK3O75914 559 aaPredicted RBP12.97□□□□□ -0.33
LINC00161-201ENST00000412526 SLC24A1O60721 1099 aa12.93□□□□□ -0.34
LINC00161-201ENST00000412526 PELP1Q8IZL8 1130 aaKnown RBP12.88□□□□□ -0.35
LINC00161-201ENST00000412526 POTEB2H3BUK9 544 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms