RNA–Protein interactions for RNA: ENST00000411517.2

RAB28P1-201, Transcript of RAB28, member RAS oncogene family pseudogene 1, humanhuman

BASIC

Gene RAB28P1, Length 641 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P1-201ENST00000411517 AEBP2Q6ZN18 517 aaPredicted RBP22.1■■□□□ 1.13
RAB28P1-201ENST00000411517 CHIC1Q5VXU3 224 aa20.96■□□□□ 0.95
RAB28P1-201ENST00000411517 SENP3Q9H4L4 574 aaPredicted RBP18.87■□□□□ 0.61
RAB28P1-201ENST00000411517 PHF23Q9BUL5 403 aaPredicted RBP18.64■□□□□ 0.57
RAB28P1-201ENST00000411517 FOXD1Q16676 465 aa17.59■□□□□ 0.41
RAB28P1-201ENST00000411517 POTEDQ86YR6 584 aa17.59■□□□□ 0.41
RAB28P1-201ENST00000411517 PLPPR3Q6T4P5 718 aa16.75■□□□□ 0.27
RAB28P1-201ENST00000411517 MSH5O43196 834 aa16.59■□□□□ 0.25
RAB28P1-201ENST00000411517 PIAS4Q8N2W9 510 aaPredicted RBP16.49■□□□□ 0.23
RAB28P1-201ENST00000411517 ADRA2BP18089 450 aa16.42■□□□□ 0.22
RAB28P1-201ENST00000411517 PPP6R1Q9UPN7 881 aa16.42■□□□□ 0.22
RAB28P1-201ENST00000411517 MAPK8IP2Q13387 824 aaPredicted RBP15.09■□□□□ 0.01
RAB28P1-201ENST00000411517 SCAF1Q9H7N4 1312 aaKnown RBP15□□□□□ -0.01
RAB28P1-201ENST00000411517 DMRT2Q9Y5R5 561 aa14.94□□□□□ -0.02
RAB28P1-201ENST00000411517 CACNB1Q02641 598 aaPredicted RBP14.76□□□□□ -0.05
RAB28P1-201ENST00000411517 PPP4R3CPQ6ZMV5 832 aa14.7□□□□□ -0.06
RAB28P1-201ENST00000411517 DCAF8L1A6NGE4 600 aa14.5□□□□□ -0.09
RAB28P1-201ENST00000411517 CNKSR2Q8WXI2 1034 aa14.4□□□□□ -0.1
RAB28P1-201ENST00000411517 HOXD11P31277 338 aaPredicted RBP14.35□□□□□ -0.11
RAB28P1-201ENST00000411517 RNF216Q9NWF9 866 aaPredicted RBP14.27□□□□□ -0.13
RAB28P1-201ENST00000411517 RNF39Q9H2S5 420 aa14.16□□□□□ -0.14
RAB28P1-201ENST00000411517 NCBP3Q53F19 620 aaKnown RBP14.14□□□□□ -0.15
RAB28P1-201ENST00000411517 NPM3O75607 178 aaKnown RBP13.9□□□□□ -0.18
RAB28P1-201ENST00000411517 C1QBPQ07021 282 aaKnown RBP13.85□□□□□ -0.19
RAB28P1-201ENST00000411517 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.8□□□□□ -0.2
RAB28P1-201ENST00000411517 DNAJC5BQ9UF47 199 aa13.78□□□□□ -0.2
RAB28P1-201ENST00000411517 KCNA4P22459 653 aa13.63□□□□□ -0.23
RAB28P1-201ENST00000411517 POTEHQ6S545 545 aa13.63□□□□□ -0.23
RAB28P1-201ENST00000411517 U3KPZ7 1027 aaPredicted RBP13.43□□□□□ -0.26
RAB28P1-201ENST00000411517 CAPN15O75808 1086 aa13.32□□□□□ -0.28
RAB28P1-201ENST00000411517 SPINK5Q9NQ38 1064 aaPredicted RBP13.29□□□□□ -0.28
RAB28P1-201ENST00000411517 SLC4A2P04920 1241 aa13.26□□□□□ -0.29
RAB28P1-201ENST00000411517 DSG3P32926 999 aa13.15□□□□□ -0.3
RAB28P1-201ENST00000411517 TRHP20396 242 aaPredicted RBP13.1□□□□□ -0.31
RAB28P1-201ENST00000411517 APLP2Q06481 763 aa13.08□□□□□ -0.32
RAB28P1-201ENST00000411517 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.05□□□□□ -0.32
RAB28P1-201ENST00000411517 HNRNPUL2Q1KMD3 747 aaKnown RBP13.05□□□□□ -0.32
RAB28P1-201ENST00000411517 ABCB7O75027 752 aa13.01□□□□□ -0.33
RAB28P1-201ENST00000411517 ZNF219Q9P2Y4 722 aaPredicted RBP13.01□□□□□ -0.33
RAB28P1-201ENST00000411517 SAMD1Q6SPF0 538 aaPredicted RBP12.98□□□□□ -0.33
RAB28P1-201ENST00000411517 SLC4A1APQ9BWU0 796 aaKnown RBP12.89□□□□□ -0.35
RAB28P1-201ENST00000411517 MYCNP04198 464 aaPredicted RBP12.87□□□□□ -0.35
RAB28P1-201ENST00000411517 FOXD4L1Q9NU39 408 aa12.73□□□□□ -0.37
RAB28P1-201ENST00000411517 POLA2Q14181 598 aa12.68□□□□□ -0.38
RAB28P1-201ENST00000411517 RBM42Q9BTD8 480 aaKnown RBP12.57□□□□□ -0.4
RAB28P1-201ENST00000411517 ATF5Q9Y2D1 282 aaPredicted RBP12.57□□□□□ -0.4
RAB28P1-201ENST00000411517 NISCHQ9Y2I1 1504 aa12.56□□□□□ -0.4
RAB28P1-201ENST00000411517 ABCC9O60706 1549 aa12.51□□□□□ -0.41
RAB28P1-201ENST00000411517 ZBTB22O15209 634 aa12.5□□□□□ -0.41
RAB28P1-201ENST00000411517 CHRDL2Q6WN34 429 aa12.45□□□□□ -0.42
RAB28P1-201ENST00000411517 ZBTB12Q9Y330 459 aaPredicted RBP12.41□□□□□ -0.42
RAB28P1-201ENST00000411517 SP7Q8TDD2 431 aaPredicted RBP12.37□□□□□ -0.43
RAB28P1-201ENST00000411517 OSCARQ8IYS5 282 aa12.3□□□□□ -0.44
RAB28P1-201ENST00000411517 ATXN8OSP0DMR3 200 aa12.28□□□□□ -0.44
RAB28P1-201ENST00000411517 AKT1S1Q96B36 256 aa12.26□□□□□ -0.45
RAB28P1-201ENST00000411517 DNAJC5Q9H3Z4 198 aa12.18□□□□□ -0.46
RAB28P1-201ENST00000411517 REM2Q8IYK8 340 aaPredicted RBP12.16□□□□□ -0.46
RAB28P1-201ENST00000411517 FBLN2P98095 1184 aa12.14□□□□□ -0.47
RAB28P1-201ENST00000411517 PITPNM1O00562 1244 aa12.04□□□□□ -0.48
RAB28P1-201ENST00000411517 PIP4P2Q8N4L2 257 aa12.03□□□□□ -0.48
RAB28P1-201ENST00000411517 SPDYE2BA6NHP3 402 aa12.01□□□□□ -0.49
RAB28P1-201ENST00000411517 HAX1O00165 279 aa12.01□□□□□ -0.49
RAB28P1-201ENST00000411517 SPDYE6P0CI01 402 aa12.01□□□□□ -0.49
RAB28P1-201ENST00000411517 SPDYE2Q495Y8 402 aa12.01□□□□□ -0.49
RAB28P1-201ENST00000411517 MKRN4PQ13434 485 aaPredicted RBP11.97□□□□□ -0.49
RAB28P1-201ENST00000411517 ZNF692Q9BU19 519 aaPredicted RBP11.91□□□□□ -0.5
RAB28P1-201ENST00000411517 EVX2Q03828 476 aa11.9□□□□□ -0.5
RAB28P1-201ENST00000411517 CSRNP3Q8WYN3 585 aa11.9□□□□□ -0.5
RAB28P1-201ENST00000411517 CLEC11AQ9Y240 323 aa11.9□□□□□ -0.5
RAB28P1-201ENST00000411517 FXR2P51116 673 aaKnown RBP eCLIP11.89□□□□□ -0.51
RAB28P1-201ENST00000411517 EHMT2Q96KQ7 1210 aa11.86□□□□□ -0.51
RAB28P1-201ENST00000411517 SPDYE1Q8NFV5 336 aaPredicted RBP11.84□□□□□ -0.51
RAB28P1-201ENST00000411517 SSUH2Q9Y2M2 353 aa11.82□□□□□ -0.52
RAB28P1-201ENST00000411517 PRKAR2AP13861 404 aaKnown RBP11.75□□□□□ -0.53
RAB28P1-201ENST00000411517 CCDC180Q9P1Z9 1646 aa11.75□□□□□ -0.53
RAB28P1-201ENST00000411517 PABPN1Q86U42 306 aaKnown RBP eCLIP11.74□□□□□ -0.53
RAB28P1-201ENST00000411517 PRR29P0C7W0 189 aa11.65□□□□□ -0.54
RAB28P1-201ENST00000411517 CHADLQ6NUI6 762 aa11.65□□□□□ -0.54
RAB28P1-201ENST00000411517 PLSCR2Q9NRY7 297 aa11.63□□□□□ -0.55
RAB28P1-201ENST00000411517 LHX8Q68G74 356 aa11.62□□□□□ -0.55
RAB28P1-201ENST00000411517 RB1CC1Q8TDY2 1594 aa11.58□□□□□ -0.55
RAB28P1-201ENST00000411517 C19orf67A6NJJ6 358 aa11.52□□□□□ -0.57
RAB28P1-201ENST00000411517 GABBR2O75899 941 aa11.51□□□□□ -0.57
RAB28P1-201ENST00000411517 SPDYE4A6NLX3 237 aa11.45□□□□□ -0.58
RAB28P1-201ENST00000411517 FARP1Q9Y4F1 1045 aaPredicted RBP11.42□□□□□ -0.58
RAB28P1-201ENST00000411517 CECR2Q9BXF3 1484 aa11.39□□□□□ -0.59
RAB28P1-201ENST00000411517 CD44P16070 742 aaKnown RBP11.39□□□□□ -0.59
RAB28P1-201ENST00000411517 STAG3Q9UJ98 1225 aa11.38□□□□□ -0.59
RAB28P1-201ENST00000411517 UNC13AQ9UPW8 1703 aa11.32□□□□□ -0.6
RAB28P1-201ENST00000411517 POTEIP0CG38 1075 aa11.31□□□□□ -0.6
RAB28P1-201ENST00000411517 CREBZFQ9NS37 354 aa11.3□□□□□ -0.6
RAB28P1-201ENST00000411517 CC2D2AQ9P2K1 1620 aa11.3□□□□□ -0.6
RAB28P1-201ENST00000411517 NACADO15069 1562 aa11.28□□□□□ -0.6
RAB28P1-201ENST00000411517 BICRAQ9NZM4 1560 aa11.24□□□□□ -0.61
RAB28P1-201ENST00000411517 ZRANB1Q9UGI0 708 aa11.24□□□□□ -0.61
RAB28P1-201ENST00000411517 CUX2O14529 1486 aa11.23□□□□□ -0.61
RAB28P1-201ENST00000411517 TRIM41Q8WV44 630 aa11.22□□□□□ -0.61
RAB28P1-201ENST00000411517 PAK3O75914 559 aaPredicted RBP11.15□□□□□ -0.62
RAB28P1-201ENST00000411517 ZNF579Q8NAF0 562 aaKnown RBP11.15□□□□□ -0.62
RAB28P1-201ENST00000411517 DCBLD2Q96PD2 775 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms