RNA–Protein interactions for RNA: ENST00000411392.1

RN7SKP273-201, Transcript of RNA, 7SK small nuclear pseudogene 273, humanhuman

BASIC

Gene RN7SKP273, Length 314 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP273-201ENST00000411392 AEBP2Q6ZN18 517 aaPredicted RBP24.65■■□□□ 1.54
RN7SKP273-201ENST00000411392 CHIC1Q5VXU3 224 aa23.8■■□□□ 1.4
RN7SKP273-201ENST00000411392 SENP3Q9H4L4 574 aaPredicted RBP20.96■□□□□ 0.95
RN7SKP273-201ENST00000411392 PHF23Q9BUL5 403 aaPredicted RBP20.9■□□□□ 0.94
RN7SKP273-201ENST00000411392 FOXD1Q16676 465 aa19.5■□□□□ 0.71
RN7SKP273-201ENST00000411392 PLPPR3Q6T4P5 718 aa19.21■□□□□ 0.67
RN7SKP273-201ENST00000411392 PPP6R1Q9UPN7 881 aa18.56■□□□□ 0.56
RN7SKP273-201ENST00000411392 ADRA2BP18089 450 aa18.55■□□□□ 0.56
RN7SKP273-201ENST00000411392 PIAS4Q8N2W9 510 aaPredicted RBP18.34■□□□□ 0.53
RN7SKP273-201ENST00000411392 MSH5O43196 834 aa18.08■□□□□ 0.48
RN7SKP273-201ENST00000411392 POTEDQ86YR6 584 aa16.97■□□□□ 0.31
RN7SKP273-201ENST00000411392 SCAF1Q9H7N4 1312 aaKnown RBP16.96■□□□□ 0.3
RN7SKP273-201ENST00000411392 MAPK8IP2Q13387 824 aaPredicted RBP16.92■□□□□ 0.3
RN7SKP273-201ENST00000411392 PPP4R3CPQ6ZMV5 832 aa16.92■□□□□ 0.3
RN7SKP273-201ENST00000411392 DMRT2Q9Y5R5 561 aa16.67■□□□□ 0.26
RN7SKP273-201ENST00000411392 CNKSR2Q8WXI2 1034 aa16.49■□□□□ 0.23
RN7SKP273-201ENST00000411392 NCBP3Q53F19 620 aaKnown RBP16.39■□□□□ 0.21
RN7SKP273-201ENST00000411392 RNF216Q9NWF9 866 aaPredicted RBP16.22■□□□□ 0.19
RN7SKP273-201ENST00000411392 HOXD11P31277 338 aaPredicted RBP16.21■□□□□ 0.19
RN7SKP273-201ENST00000411392 KCNA4P22459 653 aa16.2■□□□□ 0.18
RN7SKP273-201ENST00000411392 NPM3O75607 178 aaKnown RBP16.13■□□□□ 0.17
RN7SKP273-201ENST00000411392 DCAF8L1A6NGE4 600 aa16.08■□□□□ 0.16
RN7SKP273-201ENST00000411392 DNAJC5BQ9UF47 199 aa15.6■□□□□ 0.09
RN7SKP273-201ENST00000411392 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.52■□□□□ 0.08
RN7SKP273-201ENST00000411392 RNF39Q9H2S5 420 aa15.45■□□□□ 0.06
RN7SKP273-201ENST00000411392 SLC4A1APQ9BWU0 796 aaKnown RBP15.39■□□□□ 0.05
RN7SKP273-201ENST00000411392 CACNB1Q02641 598 aaPredicted RBP15.32■□□□□ 0.04
RN7SKP273-201ENST00000411392 SLC4A2P04920 1241 aa15.29■□□□□ 0.04
RN7SKP273-201ENST00000411392 C1QBPQ07021 282 aaKnown RBP15.26■□□□□ 0.03
RN7SKP273-201ENST00000411392 U3KPZ7 1027 aaPredicted RBP15.19■□□□□ 0.02
RN7SKP273-201ENST00000411392 FOXD4L1Q9NU39 408 aa14.98□□□□□ -0.01
RN7SKP273-201ENST00000411392 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.91□□□□□ -0.02
RN7SKP273-201ENST00000411392 MYCNP04198 464 aaPredicted RBP14.91□□□□□ -0.02
RN7SKP273-201ENST00000411392 HNRNPUL2Q1KMD3 747 aaKnown RBP14.91□□□□□ -0.02
RN7SKP273-201ENST00000411392 ZBTB22O15209 634 aa14.88□□□□□ -0.03
RN7SKP273-201ENST00000411392 SPINK5Q9NQ38 1064 aaPredicted RBP14.88□□□□□ -0.03
RN7SKP273-201ENST00000411392 CAPN15O75808 1086 aa14.86□□□□□ -0.03
RN7SKP273-201ENST00000411392 SAMD1Q6SPF0 538 aaPredicted RBP14.84□□□□□ -0.03
RN7SKP273-201ENST00000411392 APLP2Q06481 763 aa14.83□□□□□ -0.04
RN7SKP273-201ENST00000411392 TRHP20396 242 aaPredicted RBP14.74□□□□□ -0.05
RN7SKP273-201ENST00000411392 EHMT2Q96KQ7 1210 aa14.66□□□□□ -0.06
RN7SKP273-201ENST00000411392 ZNF219Q9P2Y4 722 aaPredicted RBP14.66□□□□□ -0.06
RN7SKP273-201ENST00000411392 DSG3P32926 999 aa14.62□□□□□ -0.07
RN7SKP273-201ENST00000411392 CSRNP3Q8WYN3 585 aa14.58□□□□□ -0.08
RN7SKP273-201ENST00000411392 ABCB7O75027 752 aa14.56□□□□□ -0.08
RN7SKP273-201ENST00000411392 ATF5Q9Y2D1 282 aaPredicted RBP14.55□□□□□ -0.08
RN7SKP273-201ENST00000411392 ATXN8OSP0DMR3 200 aa14.45□□□□□ -0.1
RN7SKP273-201ENST00000411392 POLA2Q14181 598 aa14.41□□□□□ -0.1
RN7SKP273-201ENST00000411392 ZBTB12Q9Y330 459 aaPredicted RBP14.1□□□□□ -0.15
RN7SKP273-201ENST00000411392 FBLN2P98095 1184 aa13.98□□□□□ -0.17
RN7SKP273-201ENST00000411392 RBM42Q9BTD8 480 aaKnown RBP13.95□□□□□ -0.18
RN7SKP273-201ENST00000411392 OSCARQ8IYS5 282 aa13.91□□□□□ -0.18
RN7SKP273-201ENST00000411392 MKRN4PQ13434 485 aaPredicted RBP13.88□□□□□ -0.19
RN7SKP273-201ENST00000411392 NISCHQ9Y2I1 1504 aa13.74□□□□□ -0.21
RN7SKP273-201ENST00000411392 AKT1S1Q96B36 256 aa13.72□□□□□ -0.21
RN7SKP273-201ENST00000411392 SPDYE2BA6NHP3 402 aa13.71□□□□□ -0.21
RN7SKP273-201ENST00000411392 SPDYE6P0CI01 402 aa13.71□□□□□ -0.21
RN7SKP273-201ENST00000411392 SPDYE2Q495Y8 402 aa13.71□□□□□ -0.21
RN7SKP273-201ENST00000411392 ZNF692Q9BU19 519 aaPredicted RBP13.66□□□□□ -0.22
RN7SKP273-201ENST00000411392 REM2Q8IYK8 340 aaPredicted RBP13.6□□□□□ -0.23
RN7SKP273-201ENST00000411392 SSUH2Q9Y2M2 353 aa13.55□□□□□ -0.24
RN7SKP273-201ENST00000411392 CHRDL2Q6WN34 429 aa13.49□□□□□ -0.25
RN7SKP273-201ENST00000411392 SPDYE4A6NLX3 237 aa13.47□□□□□ -0.25
RN7SKP273-201ENST00000411392 PABPN1Q86U42 306 aaKnown RBP eCLIP13.46□□□□□ -0.25
RN7SKP273-201ENST00000411392 PITPNM1O00562 1244 aa13.44□□□□□ -0.26
RN7SKP273-201ENST00000411392 CLEC11AQ9Y240 323 aa13.4□□□□□ -0.26
RN7SKP273-201ENST00000411392 SPDYE1Q8NFV5 336 aaPredicted RBP13.39□□□□□ -0.27
RN7SKP273-201ENST00000411392 POTEHQ6S545 545 aa13.38□□□□□ -0.27
RN7SKP273-201ENST00000411392 PIP4P2Q8N4L2 257 aa13.26□□□□□ -0.29
RN7SKP273-201ENST00000411392 FXR2P51116 673 aaKnown RBP eCLIP13.23□□□□□ -0.29
RN7SKP273-201ENST00000411392 FKBP8Q14318 412 aa13.23□□□□□ -0.29
RN7SKP273-201ENST00000411392 PRR29P0C7W0 189 aa13.22□□□□□ -0.29
RN7SKP273-201ENST00000411392 STAG3Q9UJ98 1225 aa13.16□□□□□ -0.3
RN7SKP273-201ENST00000411392 PRKAR2AP13861 404 aaKnown RBP13.12□□□□□ -0.31
RN7SKP273-201ENST00000411392 PROM2Q8N271 834 aa13.12□□□□□ -0.31
RN7SKP273-201ENST00000411392 CHADLQ6NUI6 762 aa13.08□□□□□ -0.32
RN7SKP273-201ENST00000411392 HAX1O00165 279 aa12.96□□□□□ -0.33
RN7SKP273-201ENST00000411392 CREBZFQ9NS37 354 aa12.95□□□□□ -0.34
RN7SKP273-201ENST00000411392 FARP1Q9Y4F1 1045 aaPredicted RBP12.9□□□□□ -0.34
RN7SKP273-201ENST00000411392 MIER1Q8N108 512 aa12.84□□□□□ -0.35
RN7SKP273-201ENST00000411392 FBXO3Q9UK99 471 aa12.81□□□□□ -0.36
RN7SKP273-201ENST00000411392 C19orf67A6NJJ6 358 aa12.79□□□□□ -0.36
RN7SKP273-201ENST00000411392 PLEKHG5O94827 1062 aa12.79□□□□□ -0.36
RN7SKP273-201ENST00000411392 EVX2Q03828 476 aa12.79□□□□□ -0.36
RN7SKP273-201ENST00000411392 PLCD3Q8N3E9 789 aa12.79□□□□□ -0.36
RN7SKP273-201ENST00000411392 NPM1P06748 294 aaKnown RBP eCLIP12.75□□□□□ -0.37
RN7SKP273-201ENST00000411392 MNX1P50219 401 aaPredicted RBP12.74□□□□□ -0.37
RN7SKP273-201ENST00000411392 SP7Q8TDD2 431 aaPredicted RBP12.73□□□□□ -0.37
RN7SKP273-201ENST00000411392 CD44P16070 742 aaKnown RBP12.72□□□□□ -0.37
RN7SKP273-201ENST00000411392 VASPP50552 380 aaPredicted RBP12.64□□□□□ -0.39
RN7SKP273-201ENST00000411392 ZRANB1Q9UGI0 708 aa12.63□□□□□ -0.39
RN7SKP273-201ENST00000411392 PAK3O75914 559 aaPredicted RBP12.61□□□□□ -0.39
RN7SKP273-201ENST00000411392 ZBTB47Q9UFB7 747 aaPredicted RBP12.61□□□□□ -0.39
RN7SKP273-201ENST00000411392 KLHL34Q8N239 644 aa12.56□□□□□ -0.4
RN7SKP273-201ENST00000411392 TSPYL2Q9H2G4 693 aaPredicted RBP12.56□□□□□ -0.4
RN7SKP273-201ENST00000411392 GABBR2O75899 941 aa12.53□□□□□ -0.4
RN7SKP273-201ENST00000411392 ABCC9O60706 1549 aa12.52□□□□□ -0.4
RN7SKP273-201ENST00000411392 RASEFQ8IZ41 740 aa12.51□□□□□ -0.41
RN7SKP273-201ENST00000411392 ZNF579Q8NAF0 562 aaKnown RBP12.51□□□□□ -0.41
RN7SKP273-201ENST00000411392 NUBP1P53384 320 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms