RNA–Protein interactions for RNA: ENST00000411337.1

RN7SKP53-201, Transcript of RNA, 7SK small nuclear pseudogene 53, humanhuman

BASIC

Gene RN7SKP53, Length 315 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP53-201ENST00000411337 AEBP2Q6ZN18 517 aaPredicted RBP13.07□□□□□ -0.32
RN7SKP53-201ENST00000411337 CHIC1Q5VXU3 224 aa12.67□□□□□ -0.38
RN7SKP53-201ENST00000411337 SENP3Q9H4L4 574 aaPredicted RBP11.14□□□□□ -0.63
RN7SKP53-201ENST00000411337 PHF23Q9BUL5 403 aaPredicted RBP11.11□□□□□ -0.63
RN7SKP53-201ENST00000411337 FOXD1Q16676 465 aa10.34□□□□□ -0.75
RN7SKP53-201ENST00000411337 PLPPR3Q6T4P5 718 aa10.24□□□□□ -0.77
RN7SKP53-201ENST00000411337 PPP6R1Q9UPN7 881 aa9.83□□□□□ -0.84
RN7SKP53-201ENST00000411337 ADRA2BP18089 450 aa9.81□□□□□ -0.84
RN7SKP53-201ENST00000411337 PIAS4Q8N2W9 510 aaPredicted RBP9.71□□□□□ -0.86
RN7SKP53-201ENST00000411337 MSH5O43196 834 aa9.6□□□□□ -0.87
RN7SKP53-201ENST00000411337 SCAF1Q9H7N4 1312 aaKnown RBP9.02□□□□□ -0.97
RN7SKP53-201ENST00000411337 PPP4R3CPQ6ZMV5 832 aa8.99□□□□□ -0.97
RN7SKP53-201ENST00000411337 MAPK8IP2Q13387 824 aaPredicted RBP8.93□□□□□ -0.98
RN7SKP53-201ENST00000411337 POTEDQ86YR6 584 aa8.93□□□□□ -0.98
RN7SKP53-201ENST00000411337 DMRT2Q9Y5R5 561 aa8.87□□□□□ -0.99
RN7SKP53-201ENST00000411337 CNKSR2Q8WXI2 1034 aa8.77□□□□□ -1.01
RN7SKP53-201ENST00000411337 NCBP3Q53F19 620 aaKnown RBP8.73□□□□□ -1.01
RN7SKP53-201ENST00000411337 HOXD11P31277 338 aaPredicted RBP8.65□□□□□ -1.02
RN7SKP53-201ENST00000411337 RNF216Q9NWF9 866 aaPredicted RBP8.65□□□□□ -1.02
RN7SKP53-201ENST00000411337 KCNA4P22459 653 aa8.64□□□□□ -1.03
RN7SKP53-201ENST00000411337 NPM3O75607 178 aaKnown RBP8.59□□□□□ -1.03
RN7SKP53-201ENST00000411337 DCAF8L1A6NGE4 600 aa8.45□□□□□ -1.06
RN7SKP53-201ENST00000411337 DNAJC5BQ9UF47 199 aa8.41□□□□□ -1.06
RN7SKP53-201ENST00000411337 NISCHQ9Y2I1 1504 aa8.37□□□□□ -1.07
RN7SKP53-201ENST00000411337 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.21□□□□□ -1.1
RN7SKP53-201ENST00000411337 RNF39Q9H2S5 420 aa8.21□□□□□ -1.1
RN7SKP53-201ENST00000411337 SLC4A1APQ9BWU0 796 aaKnown RBP8.2□□□□□ -1.1
RN7SKP53-201ENST00000411337 SLC4A2P04920 1241 aa8.14□□□□□ -1.11
RN7SKP53-201ENST00000411337 C1QBPQ07021 282 aaKnown RBP8.11□□□□□ -1.11
RN7SKP53-201ENST00000411337 U3KPZ7 1027 aaPredicted RBP8.08□□□□□ -1.12
RN7SKP53-201ENST00000411337 CACNB1Q02641 598 aaPredicted RBP8.06□□□□□ -1.12
RN7SKP53-201ENST00000411337 FOXD4L1Q9NU39 408 aa8□□□□□ -1.13
RN7SKP53-201ENST00000411337 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.96□□□□□ -1.14
RN7SKP53-201ENST00000411337 MYCNP04198 464 aaPredicted RBP7.96□□□□□ -1.14
RN7SKP53-201ENST00000411337 HNRNPUL2Q1KMD3 747 aaKnown RBP7.96□□□□□ -1.14
RN7SKP53-201ENST00000411337 ZBTB22O15209 634 aa7.94□□□□□ -1.14
RN7SKP53-201ENST00000411337 SAMD1Q6SPF0 538 aaPredicted RBP7.91□□□□□ -1.14
RN7SKP53-201ENST00000411337 APLP2Q06481 763 aa7.9□□□□□ -1.14
RN7SKP53-201ENST00000411337 SPINK5Q9NQ38 1064 aaPredicted RBP7.87□□□□□ -1.15
RN7SKP53-201ENST00000411337 CAPN15O75808 1086 aa7.85□□□□□ -1.15
RN7SKP53-201ENST00000411337 EHMT2Q96KQ7 1210 aa7.81□□□□□ -1.16
RN7SKP53-201ENST00000411337 CSRNP3Q8WYN3 585 aa7.8□□□□□ -1.16
RN7SKP53-201ENST00000411337 ZNF219Q9P2Y4 722 aaPredicted RBP7.8□□□□□ -1.16
RN7SKP53-201ENST00000411337 TRHP20396 242 aaPredicted RBP7.77□□□□□ -1.17
RN7SKP53-201ENST00000411337 DSG3P32926 999 aa7.76□□□□□ -1.17
RN7SKP53-201ENST00000411337 ATXN8OSP0DMR3 200 aa7.75□□□□□ -1.17
RN7SKP53-201ENST00000411337 SLC24A1O60721 1099 aa7.72□□□□□ -1.17
RN7SKP53-201ENST00000411337 ATF5Q9Y2D1 282 aaPredicted RBP7.72□□□□□ -1.17
RN7SKP53-201ENST00000411337 ABCB7O75027 752 aa7.67□□□□□ -1.18
RN7SKP53-201ENST00000411337 POLA2Q14181 598 aa7.63□□□□□ -1.19
RN7SKP53-201ENST00000411337 ZBTB12Q9Y330 459 aaPredicted RBP7.53□□□□□ -1.2
RN7SKP53-201ENST00000411337 FBLN2P98095 1184 aa7.43□□□□□ -1.22
RN7SKP53-201ENST00000411337 RBM42Q9BTD8 480 aaKnown RBP7.41□□□□□ -1.22
RN7SKP53-201ENST00000411337 CCDC180Q9P1Z9 1646 aa7.4□□□□□ -1.22
RN7SKP53-201ENST00000411337 MKRN4PQ13434 485 aaPredicted RBP7.39□□□□□ -1.23
RN7SKP53-201ENST00000411337 OSCARQ8IYS5 282 aa7.38□□□□□ -1.23
RN7SKP53-201ENST00000411337 SPDYE2BA6NHP3 402 aa7.3□□□□□ -1.24
RN7SKP53-201ENST00000411337 SPDYE6P0CI01 402 aa7.3□□□□□ -1.24
RN7SKP53-201ENST00000411337 SPDYE2Q495Y8 402 aa7.3□□□□□ -1.24
RN7SKP53-201ENST00000411337 RTN4Q9NQC3 1192 aaKnown RBP7.3□□□□□ -1.24
RN7SKP53-201ENST00000411337 AKT1S1Q96B36 256 aa7.29□□□□□ -1.24
RN7SKP53-201ENST00000411337 ZNF692Q9BU19 519 aaPredicted RBP7.24□□□□□ -1.25
RN7SKP53-201ENST00000411337 SSUH2Q9Y2M2 353 aa7.24□□□□□ -1.25
RN7SKP53-201ENST00000411337 AMER1Q5JTC6 1135 aaPredicted RBP7.21□□□□□ -1.26
RN7SKP53-201ENST00000411337 REM2Q8IYK8 340 aaPredicted RBP7.21□□□□□ -1.26
RN7SKP53-201ENST00000411337 SPDYE4A6NLX3 237 aa7.17□□□□□ -1.26
RN7SKP53-201ENST00000411337 CHRDL2Q6WN34 429 aa7.14□□□□□ -1.27
RN7SKP53-201ENST00000411337 PABPN1Q86U42 306 aaKnown RBP eCLIP7.14□□□□□ -1.27
RN7SKP53-201ENST00000411337 PITPNM1O00562 1244 aa7.12□□□□□ -1.27
RN7SKP53-201ENST00000411337 SPDYE1Q8NFV5 336 aaPredicted RBP7.12□□□□□ -1.27
RN7SKP53-201ENST00000411337 PROM2Q8N271 834 aa7.06□□□□□ -1.28
RN7SKP53-201ENST00000411337 CLEC11AQ9Y240 323 aa7.06□□□□□ -1.28
RN7SKP53-201ENST00000411337 FKBP8Q14318 412 aa7.05□□□□□ -1.28
RN7SKP53-201ENST00000411337 POTEHQ6S545 545 aa7.05□□□□□ -1.28
RN7SKP53-201ENST00000411337 ZCCHC6Q5VYS8 1495 aaKnown RBP7.04□□□□□ -1.28
RN7SKP53-201ENST00000411337 FXR2P51116 673 aaKnown RBP eCLIP7.03□□□□□ -1.28
RN7SKP53-201ENST00000411337 PIP4P2Q8N4L2 257 aa7.02□□□□□ -1.29
RN7SKP53-201ENST00000411337 STAG3Q9UJ98 1225 aa7.01□□□□□ -1.29
RN7SKP53-201ENST00000411337 PRR29P0C7W0 189 aa6.99□□□□□ -1.29
RN7SKP53-201ENST00000411337 ABCC9O60706 1549 aa6.97□□□□□ -1.29
RN7SKP53-201ENST00000411337 DCAF1Q9Y4B6 1507 aa6.96□□□□□ -1.3
RN7SKP53-201ENST00000411337 PRKAR2AP13861 404 aaKnown RBP6.94□□□□□ -1.3
RN7SKP53-201ENST00000411337 MYO15BQ96JP2 1530 aa6.91□□□□□ -1.3
RN7SKP53-201ENST00000411337 CHADLQ6NUI6 762 aa6.89□□□□□ -1.31
RN7SKP53-201ENST00000411337 CREBZFQ9NS37 354 aa6.88□□□□□ -1.31
RN7SKP53-201ENST00000411337 NACADO15069 1562 aa6.86□□□□□ -1.31
RN7SKP53-201ENST00000411337 FBXO3Q9UK99 471 aa6.86□□□□□ -1.31
RN7SKP53-201ENST00000411337 FARP1Q9Y4F1 1045 aaPredicted RBP6.84□□□□□ -1.31
RN7SKP53-201ENST00000411337 RB1CC1Q8TDY2 1594 aa6.82□□□□□ -1.32
RN7SKP53-201ENST00000411337 HAX1O00165 279 aa6.82□□□□□ -1.32
RN7SKP53-201ENST00000411337 MNX1P50219 401 aaPredicted RBP6.81□□□□□ -1.32
RN7SKP53-201ENST00000411337 MIER1Q8N108 512 aa6.8□□□□□ -1.32
RN7SKP53-201ENST00000411337 C19orf67A6NJJ6 358 aa6.79□□□□□ -1.32
RN7SKP53-201ENST00000411337 PLEKHG5O94827 1062 aa6.79□□□□□ -1.32
RN7SKP53-201ENST00000411337 DCAF8L2P0C7V8 631 aa6.79□□□□□ -1.32
RN7SKP53-201ENST00000411337 PLCD3Q8N3E9 789 aa6.78□□□□□ -1.32
RN7SKP53-201ENST00000411337 NPM1P06748 294 aaKnown RBP eCLIP6.77□□□□□ -1.33
RN7SKP53-201ENST00000411337 PRKCSHP14314 528 aaPredicted RBP6.77□□□□□ -1.33
RN7SKP53-201ENST00000411337 UNC13AQ9UPW8 1703 aa6.76□□□□□ -1.33
RN7SKP53-201ENST00000411337 VASPP50552 380 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms