RNA–Protein interactions for RNA: ENST00000411194.1

RN7SKP263-201, Transcript of RNA, 7SK small nuclear pseudogene 263, humanhuman

BASIC

Gene RN7SKP263, Length 309 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP263-201ENST00000411194 AEBP2Q6ZN18 517 aaPredicted RBP29.9■■■□□ 2.38
RN7SKP263-201ENST00000411194 CHIC1Q5VXU3 224 aa28.03■■■□□ 2.08
RN7SKP263-201ENST00000411194 SENP3Q9H4L4 574 aaPredicted RBP25.67■■□□□ 1.7
RN7SKP263-201ENST00000411194 PHF23Q9BUL5 403 aaPredicted RBP25.23■■□□□ 1.63
RN7SKP263-201ENST00000411194 FOXD1Q16676 465 aa23.95■■□□□ 1.42
RN7SKP263-201ENST00000411194 POTEDQ86YR6 584 aa23.09■■□□□ 1.29
RN7SKP263-201ENST00000411194 MSH5O43196 834 aa22.7■■□□□ 1.22
RN7SKP263-201ENST00000411194 PIAS4Q8N2W9 510 aaPredicted RBP22.27■■□□□ 1.16
RN7SKP263-201ENST00000411194 PLPPR3Q6T4P5 718 aa22.04■■□□□ 1.12
RN7SKP263-201ENST00000411194 PPP6R1Q9UPN7 881 aa21.93■■□□□ 1.1
RN7SKP263-201ENST00000411194 ADRA2BP18089 450 aa21.84■■□□□ 1.09
RN7SKP263-201ENST00000411194 DMRT2Q9Y5R5 561 aa20.25■□□□□ 0.83
RN7SKP263-201ENST00000411194 MAPK8IP2Q13387 824 aaPredicted RBP20.22■□□□□ 0.83
RN7SKP263-201ENST00000411194 SCAF1Q9H7N4 1312 aaKnown RBP20.07■□□□□ 0.8
RN7SKP263-201ENST00000411194 CACNB1Q02641 598 aaPredicted RBP19.82■□□□□ 0.76
RN7SKP263-201ENST00000411194 DCAF8L1A6NGE4 600 aa19.47■□□□□ 0.71
RN7SKP263-201ENST00000411194 HOXD11P31277 338 aaPredicted RBP19.27■□□□□ 0.68
RN7SKP263-201ENST00000411194 RNF39Q9H2S5 420 aa19.27■□□□□ 0.68
RN7SKP263-201ENST00000411194 PPP4R3CPQ6ZMV5 832 aa19.22■□□□□ 0.67
RN7SKP263-201ENST00000411194 CNKSR2Q8WXI2 1034 aa19.02■□□□□ 0.64
RN7SKP263-201ENST00000411194 C1QBPQ07021 282 aaKnown RBP19■□□□□ 0.63
RN7SKP263-201ENST00000411194 RNF216Q9NWF9 866 aaPredicted RBP18.99■□□□□ 0.63
RN7SKP263-201ENST00000411194 DNAJC5BQ9UF47 199 aa18.76■□□□□ 0.59
RN7SKP263-201ENST00000411194 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.4■□□□□ 0.54
RN7SKP263-201ENST00000411194 NCBP3Q53F19 620 aaKnown RBP18.36■□□□□ 0.53
RN7SKP263-201ENST00000411194 NPM3O75607 178 aaKnown RBP18.03■□□□□ 0.48
RN7SKP263-201ENST00000411194 POTEHQ6S545 545 aa18■□□□□ 0.47
RN7SKP263-201ENST00000411194 U3KPZ7 1027 aaPredicted RBP17.89■□□□□ 0.45
RN7SKP263-201ENST00000411194 DSG3P32926 999 aa17.86■□□□□ 0.45
RN7SKP263-201ENST00000411194 CAPN15O75808 1086 aa17.85■□□□□ 0.45
RN7SKP263-201ENST00000411194 SPINK5Q9NQ38 1064 aaPredicted RBP17.8■□□□□ 0.44
RN7SKP263-201ENST00000411194 APLP2Q06481 763 aa17.43■□□□□ 0.38
RN7SKP263-201ENST00000411194 TRHP20396 242 aaPredicted RBP17.41■□□□□ 0.38
RN7SKP263-201ENST00000411194 ZNF219Q9P2Y4 722 aaPredicted RBP17.38■□□□□ 0.37
RN7SKP263-201ENST00000411194 ABCB7O75027 752 aa17.35■□□□□ 0.37
RN7SKP263-201ENST00000411194 SLC4A2P04920 1241 aa17.35■□□□□ 0.37
RN7SKP263-201ENST00000411194 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.27■□□□□ 0.36
RN7SKP263-201ENST00000411194 HNRNPUL2Q1KMD3 747 aaKnown RBP17.27■□□□□ 0.36
RN7SKP263-201ENST00000411194 KCNA4P22459 653 aa17.16■□□□□ 0.34
RN7SKP263-201ENST00000411194 SAMD1Q6SPF0 538 aaPredicted RBP17.12■□□□□ 0.33
RN7SKP263-201ENST00000411194 RBM42Q9BTD8 480 aaKnown RBP17.1■□□□□ 0.33
RN7SKP263-201ENST00000411194 CHRDL2Q6WN34 429 aa16.92■□□□□ 0.3
RN7SKP263-201ENST00000411194 POLA2Q14181 598 aa16.81■□□□□ 0.28
RN7SKP263-201ENST00000411194 MYCNP04198 464 aaPredicted RBP16.72■□□□□ 0.27
RN7SKP263-201ENST00000411194 SP7Q8TDD2 431 aaPredicted RBP16.61■□□□□ 0.25
RN7SKP263-201ENST00000411194 AKT1S1Q96B36 256 aa16.57■□□□□ 0.24
RN7SKP263-201ENST00000411194 ZBTB12Q9Y330 459 aaPredicted RBP16.47■□□□□ 0.23
RN7SKP263-201ENST00000411194 REM2Q8IYK8 340 aaPredicted RBP16.39■□□□□ 0.21
RN7SKP263-201ENST00000411194 PIP4P2Q8N4L2 257 aa16.39■□□□□ 0.21
RN7SKP263-201ENST00000411194 ATF5Q9Y2D1 282 aaPredicted RBP16.32■□□□□ 0.2
RN7SKP263-201ENST00000411194 HAX1O00165 279 aa16.27■□□□□ 0.2
RN7SKP263-201ENST00000411194 OSCARQ8IYS5 282 aa16.27■□□□□ 0.2
RN7SKP263-201ENST00000411194 FOXD4L1Q9NU39 408 aa16.23■□□□□ 0.19
RN7SKP263-201ENST00000411194 PITPNM1O00562 1244 aa16.21■□□□□ 0.19
RN7SKP263-201ENST00000411194 FXR2P51116 673 aaKnown RBP eCLIP16.2■□□□□ 0.18
RN7SKP263-201ENST00000411194 SLC4A1APQ9BWU0 796 aaKnown RBP16.11■□□□□ 0.17
RN7SKP263-201ENST00000411194 EVX2Q03828 476 aa15.96■□□□□ 0.15
RN7SKP263-201ENST00000411194 SPDYE2BA6NHP3 402 aa15.89■□□□□ 0.13
RN7SKP263-201ENST00000411194 SPDYE6P0CI01 402 aa15.89■□□□□ 0.13
RN7SKP263-201ENST00000411194 SPDYE2Q495Y8 402 aa15.89■□□□□ 0.13
RN7SKP263-201ENST00000411194 ATXN8OSP0DMR3 200 aa15.81■□□□□ 0.12
RN7SKP263-201ENST00000411194 PRKAR2AP13861 404 aaKnown RBP15.81■□□□□ 0.12
RN7SKP263-201ENST00000411194 FBLN2P98095 1184 aa15.81■□□□□ 0.12
RN7SKP263-201ENST00000411194 SPDYE1Q8NFV5 336 aaPredicted RBP15.77■□□□□ 0.12
RN7SKP263-201ENST00000411194 CLEC11AQ9Y240 323 aa15.76■□□□□ 0.11
RN7SKP263-201ENST00000411194 ZBTB22O15209 634 aa15.72■□□□□ 0.11
RN7SKP263-201ENST00000411194 C19orf67A6NJJ6 358 aa15.7■□□□□ 0.1
RN7SKP263-201ENST00000411194 GABBR2O75899 941 aa15.62■□□□□ 0.09
RN7SKP263-201ENST00000411194 ZNF692Q9BU19 519 aaPredicted RBP15.61■□□□□ 0.09
RN7SKP263-201ENST00000411194 SSUH2Q9Y2M2 353 aa15.58■□□□□ 0.08
RN7SKP263-201ENST00000411194 LHX8Q68G74 356 aa15.57■□□□□ 0.08
RN7SKP263-201ENST00000411194 MKRN4PQ13434 485 aaPredicted RBP15.54■□□□□ 0.08
RN7SKP263-201ENST00000411194 CHADLQ6NUI6 762 aa15.48■□□□□ 0.07
RN7SKP263-201ENST00000411194 PRR29P0C7W0 189 aa15.43■□□□□ 0.06
RN7SKP263-201ENST00000411194 PABPN1Q86U42 306 aaKnown RBP eCLIP15.34■□□□□ 0.05
RN7SKP263-201ENST00000411194 CD44P16070 742 aaKnown RBP15.27■□□□□ 0.04
RN7SKP263-201ENST00000411194 POTEIP0CG38 1075 aa15.24■□□□□ 0.03
RN7SKP263-201ENST00000411194 CLCN6P51797 869 aa15.24■□□□□ 0.03
RN7SKP263-201ENST00000411194 FARP1Q9Y4F1 1045 aaPredicted RBP15.22■□□□□ 0.03
RN7SKP263-201ENST00000411194 DCBLD2Q96PD2 775 aa15.11■□□□□ 0.01
RN7SKP263-201ENST00000411194 PLSCR2Q9NRY7 297 aa15.06■□□□□ 0
RN7SKP263-201ENST00000411194 ZNF579Q8NAF0 562 aaKnown RBP15.01□□□□□ -0.01
RN7SKP263-201ENST00000411194 ZRANB1Q9UGI0 708 aa14.98□□□□□ -0.01
RN7SKP263-201ENST00000411194 CREBZFQ9NS37 354 aa14.86□□□□□ -0.03
RN7SKP263-201ENST00000411194 GALR2O43603 387 aaPredicted RBP14.85□□□□□ -0.03
RN7SKP263-201ENST00000411194 STAG3Q9UJ98 1225 aa14.85□□□□□ -0.03
RN7SKP263-201ENST00000411194 OTUD5Q96G74 571 aa14.82□□□□□ -0.04
RN7SKP263-201ENST00000411194 PAK3O75914 559 aaPredicted RBP14.77□□□□□ -0.05
RN7SKP263-201ENST00000411194 POTEB2H3BUK9 544 aa14.73□□□□□ -0.05
RN7SKP263-201ENST00000411194 POTEMA6NI47 508 aa14.69□□□□□ -0.06
RN7SKP263-201ENST00000411194 PHF12Q96QT6 1004 aa14.68□□□□□ -0.06
RN7SKP263-201ENST00000411194 NPM1P06748 294 aaKnown RBP eCLIP14.63□□□□□ -0.07
RN7SKP263-201ENST00000411194 POTEGQ6S5H5 508 aa14.63□□□□□ -0.07
RN7SKP263-201ENST00000411194 PELP1Q8IZL8 1130 aaKnown RBP14.59□□□□□ -0.07
RN7SKP263-201ENST00000411194 SPDYE4A6NLX3 237 aa14.57□□□□□ -0.08
RN7SKP263-201ENST00000411194 PCDH10Q9P2E7 1040 aa14.54□□□□□ -0.08
RN7SKP263-201ENST00000411194 MNX1P50219 401 aaPredicted RBP14.52□□□□□ -0.09
RN7SKP263-201ENST00000411194 METRNQ9UJH8 293 aa14.52□□□□□ -0.09
RN7SKP263-201ENST00000411194 ASTLQ6HA08 431 aaPredicted RBP14.51□□□□□ -0.09
RN7SKP263-201ENST00000411194 CSRNP3Q8WYN3 585 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms