RNA–Protein interactions for RNA: ENST00000411083.1

RNU6-1135P-201, Transcript of RNA, U6 small nuclear 1135, pseudogene, humanhuman

BASIC

Gene RNU6-1135P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1135P-201ENST00000411083 AEBP2Q6ZN18 517 aaPredicted RBP17.14■□□□□ 0.33
RNU6-1135P-201ENST00000411083 CHIC1Q5VXU3 224 aa16.07■□□□□ 0.16
RNU6-1135P-201ENST00000411083 SENP3Q9H4L4 574 aaPredicted RBP14.71□□□□□ -0.05
RNU6-1135P-201ENST00000411083 PHF23Q9BUL5 403 aaPredicted RBP14.49□□□□□ -0.09
RNU6-1135P-201ENST00000411083 FOXD1Q16676 465 aa13.75□□□□□ -0.21
RNU6-1135P-201ENST00000411083 POTEDQ86YR6 584 aa13.34□□□□□ -0.27
RNU6-1135P-201ENST00000411083 MSH5O43196 834 aa13.03□□□□□ -0.32
RNU6-1135P-201ENST00000411083 PIAS4Q8N2W9 510 aaPredicted RBP12.79□□□□□ -0.36
RNU6-1135P-201ENST00000411083 PLPPR3Q6T4P5 718 aa12.59□□□□□ -0.39
RNU6-1135P-201ENST00000411083 PPP6R1Q9UPN7 881 aa12.58□□□□□ -0.4
RNU6-1135P-201ENST00000411083 ADRA2BP18089 450 aa12.54□□□□□ -0.4
RNU6-1135P-201ENST00000411083 MAPK8IP2Q13387 824 aaPredicted RBP11.64□□□□□ -0.55
RNU6-1135P-201ENST00000411083 DMRT2Q9Y5R5 561 aa11.59□□□□□ -0.55
RNU6-1135P-201ENST00000411083 SCAF1Q9H7N4 1312 aaKnown RBP11.51□□□□□ -0.57
RNU6-1135P-201ENST00000411083 CACNB1Q02641 598 aaPredicted RBP11.46□□□□□ -0.57
RNU6-1135P-201ENST00000411083 DCAF8L1A6NGE4 600 aa11.25□□□□□ -0.61
RNU6-1135P-201ENST00000411083 RNF39Q9H2S5 420 aa11.05□□□□□ -0.64
RNU6-1135P-201ENST00000411083 HOXD11P31277 338 aaPredicted RBP11□□□□□ -0.65
RNU6-1135P-201ENST00000411083 PPP4R3CPQ6ZMV5 832 aa10.99□□□□□ -0.65
RNU6-1135P-201ENST00000411083 C1QBPQ07021 282 aaKnown RBP10.9□□□□□ -0.66
RNU6-1135P-201ENST00000411083 CNKSR2Q8WXI2 1034 aa10.87□□□□□ -0.67
RNU6-1135P-201ENST00000411083 RNF216Q9NWF9 866 aaPredicted RBP10.85□□□□□ -0.67
RNU6-1135P-201ENST00000411083 DNAJC5BQ9UF47 199 aa10.68□□□□□ -0.7
RNU6-1135P-201ENST00000411083 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.57□□□□□ -0.72
RNU6-1135P-201ENST00000411083 NCBP3Q53F19 620 aaKnown RBP10.48□□□□□ -0.73
RNU6-1135P-201ENST00000411083 POTEHQ6S545 545 aa10.4□□□□□ -0.74
RNU6-1135P-201ENST00000411083 NPM3O75607 178 aaKnown RBP10.28□□□□□ -0.76
RNU6-1135P-201ENST00000411083 CAPN15O75808 1086 aa10.28□□□□□ -0.76
RNU6-1135P-201ENST00000411083 DSG3P32926 999 aa10.25□□□□□ -0.77
RNU6-1135P-201ENST00000411083 U3KPZ7 1027 aaPredicted RBP10.24□□□□□ -0.77
RNU6-1135P-201ENST00000411083 SPINK5Q9NQ38 1064 aaPredicted RBP10.23□□□□□ -0.77
RNU6-1135P-201ENST00000411083 TRHP20396 242 aaPredicted RBP10.03□□□□□ -0.8
RNU6-1135P-201ENST00000411083 ABCB7O75027 752 aa9.99□□□□□ -0.81
RNU6-1135P-201ENST00000411083 APLP2Q06481 763 aa9.96□□□□□ -0.82
RNU6-1135P-201ENST00000411083 ZNF219Q9P2Y4 722 aaPredicted RBP9.95□□□□□ -0.82
RNU6-1135P-201ENST00000411083 SLC4A2P04920 1241 aa9.9□□□□□ -0.82
RNU6-1135P-201ENST00000411083 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.87□□□□□ -0.83
RNU6-1135P-201ENST00000411083 HNRNPUL2Q1KMD3 747 aaKnown RBP9.87□□□□□ -0.83
RNU6-1135P-201ENST00000411083 RBM42Q9BTD8 480 aaKnown RBP9.8□□□□□ -0.84
RNU6-1135P-201ENST00000411083 SAMD1Q6SPF0 538 aaPredicted RBP9.78□□□□□ -0.84
RNU6-1135P-201ENST00000411083 KCNA4P22459 653 aa9.77□□□□□ -0.85
RNU6-1135P-201ENST00000411083 CHRDL2Q6WN34 429 aa9.73□□□□□ -0.85
RNU6-1135P-201ENST00000411083 POLA2Q14181 598 aa9.65□□□□□ -0.86
RNU6-1135P-201ENST00000411083 SP7Q8TDD2 431 aaPredicted RBP9.57□□□□□ -0.88
RNU6-1135P-201ENST00000411083 MYCNP04198 464 aaPredicted RBP9.53□□□□□ -0.88
RNU6-1135P-201ENST00000411083 AKT1S1Q96B36 256 aa9.49□□□□□ -0.89
RNU6-1135P-201ENST00000411083 HAX1O00165 279 aa9.41□□□□□ -0.9
RNU6-1135P-201ENST00000411083 REM2Q8IYK8 340 aaPredicted RBP9.41□□□□□ -0.9
RNU6-1135P-201ENST00000411083 PIP4P2Q8N4L2 257 aa9.41□□□□□ -0.9
RNU6-1135P-201ENST00000411083 ZBTB12Q9Y330 459 aaPredicted RBP9.4□□□□□ -0.9
RNU6-1135P-201ENST00000411083 ATF5Q9Y2D1 282 aaPredicted RBP9.34□□□□□ -0.91
RNU6-1135P-201ENST00000411083 OSCARQ8IYS5 282 aa9.33□□□□□ -0.92
RNU6-1135P-201ENST00000411083 PITPNM1O00562 1244 aa9.3□□□□□ -0.92
RNU6-1135P-201ENST00000411083 FXR2P51116 673 aaKnown RBP eCLIP9.29□□□□□ -0.92
RNU6-1135P-201ENST00000411083 FOXD4L1Q9NU39 408 aa9.23□□□□□ -0.93
RNU6-1135P-201ENST00000411083 EVX2Q03828 476 aa9.2□□□□□ -0.94
RNU6-1135P-201ENST00000411083 SLC4A1APQ9BWU0 796 aaKnown RBP9.17□□□□□ -0.94
RNU6-1135P-201ENST00000411083 PRKAR2AP13861 404 aaKnown RBP9.09□□□□□ -0.95
RNU6-1135P-201ENST00000411083 CLEC11AQ9Y240 323 aa9.09□□□□□ -0.95
RNU6-1135P-201ENST00000411083 SPDYE2BA6NHP3 402 aa9.07□□□□□ -0.96
RNU6-1135P-201ENST00000411083 SPDYE6P0CI01 402 aa9.07□□□□□ -0.96
RNU6-1135P-201ENST00000411083 SPDYE2Q495Y8 402 aa9.07□□□□□ -0.96
RNU6-1135P-201ENST00000411083 FBLN2P98095 1184 aa9.05□□□□□ -0.96
RNU6-1135P-201ENST00000411083 SPDYE1Q8NFV5 336 aaPredicted RBP9.03□□□□□ -0.96
RNU6-1135P-201ENST00000411083 C19orf67A6NJJ6 358 aa9□□□□□ -0.97
RNU6-1135P-201ENST00000411083 LHX8Q68G74 356 aa9□□□□□ -0.97
RNU6-1135P-201ENST00000411083 GABBR2O75899 941 aa8.99□□□□□ -0.97
RNU6-1135P-201ENST00000411083 ATXN8OSP0DMR3 200 aa8.97□□□□□ -0.97
RNU6-1135P-201ENST00000411083 ZNF692Q9BU19 519 aaPredicted RBP8.96□□□□□ -0.98
RNU6-1135P-201ENST00000411083 ZBTB22O15209 634 aa8.93□□□□□ -0.98
RNU6-1135P-201ENST00000411083 CHADLQ6NUI6 762 aa8.91□□□□□ -0.98
RNU6-1135P-201ENST00000411083 PRR29P0C7W0 189 aa8.87□□□□□ -0.99
RNU6-1135P-201ENST00000411083 SSUH2Q9Y2M2 353 aa8.87□□□□□ -0.99
RNU6-1135P-201ENST00000411083 MKRN4PQ13434 485 aaPredicted RBP8.86□□□□□ -0.99
RNU6-1135P-201ENST00000411083 PABPN1Q86U42 306 aaKnown RBP eCLIP8.79□□□□□ -1
RNU6-1135P-201ENST00000411083 PLSCR2Q9NRY7 297 aa8.78□□□□□ -1
RNU6-1135P-201ENST00000411083 CD44P16070 742 aaKnown RBP8.77□□□□□ -1.01
RNU6-1135P-201ENST00000411083 POTEIP0CG38 1075 aa8.76□□□□□ -1.01
RNU6-1135P-201ENST00000411083 FARP1Q9Y4F1 1045 aaPredicted RBP8.73□□□□□ -1.01
RNU6-1135P-201ENST00000411083 DCBLD2Q96PD2 775 aa8.72□□□□□ -1.01
RNU6-1135P-201ENST00000411083 CLCN6P51797 869 aa8.71□□□□□ -1.02
RNU6-1135P-201ENST00000411083 ZRANB1Q9UGI0 708 aa8.62□□□□□ -1.03
RNU6-1135P-201ENST00000411083 ZNF579Q8NAF0 562 aaKnown RBP8.58□□□□□ -1.04
RNU6-1135P-201ENST00000411083 GALR2O43603 387 aaPredicted RBP8.53□□□□□ -1.04
RNU6-1135P-201ENST00000411083 OTUD5Q96G74 571 aa8.53□□□□□ -1.04
RNU6-1135P-201ENST00000411083 CREBZFQ9NS37 354 aa8.5□□□□□ -1.05
RNU6-1135P-201ENST00000411083 POTEMA6NI47 508 aa8.49□□□□□ -1.05
RNU6-1135P-201ENST00000411083 POTEB2H3BUK9 544 aa8.48□□□□□ -1.05
RNU6-1135P-201ENST00000411083 PAK3O75914 559 aaPredicted RBP8.48□□□□□ -1.05
RNU6-1135P-201ENST00000411083 STAG3Q9UJ98 1225 aa8.48□□□□□ -1.05
RNU6-1135P-201ENST00000411083 POTEGQ6S5H5 508 aa8.45□□□□□ -1.06
RNU6-1135P-201ENST00000411083 PHF12Q96QT6 1004 aa8.43□□□□□ -1.06
RNU6-1135P-201ENST00000411083 PELP1Q8IZL8 1130 aaKnown RBP8.39□□□□□ -1.07
RNU6-1135P-201ENST00000411083 NPM1P06748 294 aaKnown RBP eCLIP8.38□□□□□ -1.07
RNU6-1135P-201ENST00000411083 PCDH10Q9P2E7 1040 aa8.36□□□□□ -1.07
RNU6-1135P-201ENST00000411083 METRNQ9UJH8 293 aa8.34□□□□□ -1.07
RNU6-1135P-201ENST00000411083 C7P10643 843 aa8.32□□□□□ -1.08
RNU6-1135P-201ENST00000411083 SLC39A7Q92504 469 aa8.32□□□□□ -1.08
RNU6-1135P-201ENST00000411083 SPDYE4A6NLX3 237 aa8.31□□□□□ -1.08
RNU6-1135P-201ENST00000411083 MAMSTRQ6ZN01 415 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms