RNA–Protein interactions for RNA: ENST00000410818.1

RNU4-46P-201, Transcript of RNA, U4 small nuclear 46, pseudogene, humanhuman

BASIC

Gene RNU4-46P, Length 138 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-46P-201ENST00000410818 AEBP2Q6ZN18 517 aaPredicted RBP16.76■□□□□ 0.27
RNU4-46P-201ENST00000410818 CHIC1Q5VXU3 224 aa16.36■□□□□ 0.21
RNU4-46P-201ENST00000410818 PHF23Q9BUL5 403 aaPredicted RBP14.44□□□□□ -0.1
RNU4-46P-201ENST00000410818 SENP3Q9H4L4 574 aaPredicted RBP14.12□□□□□ -0.15
RNU4-46P-201ENST00000410818 PLPPR3Q6T4P5 718 aa13.26□□□□□ -0.29
RNU4-46P-201ENST00000410818 FOXD1Q16676 465 aa13.15□□□□□ -0.3
RNU4-46P-201ENST00000410818 PPP6R1Q9UPN7 881 aa12.72□□□□□ -0.37
RNU4-46P-201ENST00000410818 ADRA2BP18089 450 aa12.7□□□□□ -0.38
RNU4-46P-201ENST00000410818 PIAS4Q8N2W9 510 aaPredicted RBP12.39□□□□□ -0.43
RNU4-46P-201ENST00000410818 MSH5O43196 834 aa12.03□□□□□ -0.48
RNU4-46P-201ENST00000410818 PPP4R3CPQ6ZMV5 832 aa11.72□□□□□ -0.53
RNU4-46P-201ENST00000410818 KCNA4P22459 653 aa11.56□□□□□ -0.56
RNU4-46P-201ENST00000410818 MAPK8IP2Q13387 824 aaPredicted RBP11.51□□□□□ -0.57
RNU4-46P-201ENST00000410818 SCAF1Q9H7N4 1312 aaKnown RBP11.49□□□□□ -0.57
RNU4-46P-201ENST00000410818 NCBP3Q53F19 620 aaKnown RBP11.36□□□□□ -0.59
RNU4-46P-201ENST00000410818 CNKSR2Q8WXI2 1034 aa11.36□□□□□ -0.59
RNU4-46P-201ENST00000410818 DMRT2Q9Y5R5 561 aa11.31□□□□□ -0.6
RNU4-46P-201ENST00000410818 NPM3O75607 178 aaKnown RBP11.29□□□□□ -0.6
RNU4-46P-201ENST00000410818 RNF216Q9NWF9 866 aaPredicted RBP11.12□□□□□ -0.63
RNU4-46P-201ENST00000410818 HOXD11P31277 338 aaPredicted RBP11.09□□□□□ -0.63
RNU4-46P-201ENST00000410818 SLC4A1APQ9BWU0 796 aaKnown RBP10.97□□□□□ -0.65
RNU4-46P-201ENST00000410818 POTEDQ86YR6 584 aa10.93□□□□□ -0.66
RNU4-46P-201ENST00000410818 DNAJC5BQ9UF47 199 aa10.92□□□□□ -0.66
RNU4-46P-201ENST00000410818 DCAF8L1A6NGE4 600 aa10.79□□□□□ -0.68
RNU4-46P-201ENST00000410818 EHMT2Q96KQ7 1210 aa10.75□□□□□ -0.69
RNU4-46P-201ENST00000410818 ZBTB22O15209 634 aa10.69□□□□□ -0.7
RNU4-46P-201ENST00000410818 SLC4A2P04920 1241 aa10.67□□□□□ -0.7
RNU4-46P-201ENST00000410818 CSRNP3Q8WYN3 585 aa10.61□□□□□ -0.71
RNU4-46P-201ENST00000410818 FOXD4L1Q9NU39 408 aa10.57□□□□□ -0.72
RNU4-46P-201ENST00000410818 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.53□□□□□ -0.72
RNU4-46P-201ENST00000410818 U3KPZ7 1027 aaPredicted RBP10.44□□□□□ -0.74
RNU4-46P-201ENST00000410818 MYCNP04198 464 aaPredicted RBP10.39□□□□□ -0.75
RNU4-46P-201ENST00000410818 RNF39Q9H2S5 420 aa10.37□□□□□ -0.75
RNU4-46P-201ENST00000410818 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.2□□□□□ -0.78
RNU4-46P-201ENST00000410818 HNRNPUL2Q1KMD3 747 aaKnown RBP10.2□□□□□ -0.78
RNU4-46P-201ENST00000410818 SAMD1Q6SPF0 538 aaPredicted RBP10.2□□□□□ -0.78
RNU4-46P-201ENST00000410818 C1QBPQ07021 282 aaKnown RBP10.19□□□□□ -0.78
RNU4-46P-201ENST00000410818 ATF5Q9Y2D1 282 aaPredicted RBP10.19□□□□□ -0.78
RNU4-46P-201ENST00000410818 ATXN8OSP0DMR3 200 aa10.17□□□□□ -0.78
RNU4-46P-201ENST00000410818 SPINK5Q9NQ38 1064 aaPredicted RBP10.14□□□□□ -0.79
RNU4-46P-201ENST00000410818 APLP2Q06481 763 aa10.06□□□□□ -0.8
RNU4-46P-201ENST00000410818 CAPN15O75808 1086 aa10.03□□□□□ -0.8
RNU4-46P-201ENST00000410818 CACNB1Q02641 598 aaPredicted RBP10.02□□□□□ -0.81
RNU4-46P-201ENST00000410818 TRHP20396 242 aaPredicted RBP10□□□□□ -0.81
RNU4-46P-201ENST00000410818 ZNF219Q9P2Y4 722 aaPredicted RBP9.98□□□□□ -0.81
RNU4-46P-201ENST00000410818 ABCB7O75027 752 aa9.9□□□□□ -0.82
RNU4-46P-201ENST00000410818 DSG3P32926 999 aa9.88□□□□□ -0.83
RNU4-46P-201ENST00000410818 POLA2Q14181 598 aa9.86□□□□□ -0.83
RNU4-46P-201ENST00000410818 MKRN4PQ13434 485 aaPredicted RBP9.74□□□□□ -0.85
RNU4-46P-201ENST00000410818 ZBTB12Q9Y330 459 aaPredicted RBP9.65□□□□□ -0.86
RNU4-46P-201ENST00000410818 FBLN2P98095 1184 aa9.64□□□□□ -0.87
RNU4-46P-201ENST00000410818 OSCARQ8IYS5 282 aa9.57□□□□□ -0.88
RNU4-46P-201ENST00000410818 FKBP8Q14318 412 aa9.56□□□□□ -0.88
RNU4-46P-201ENST00000410818 SPDYE4A6NLX3 237 aa9.48□□□□□ -0.89
RNU4-46P-201ENST00000410818 SPDYE2BA6NHP3 402 aa9.42□□□□□ -0.9
RNU4-46P-201ENST00000410818 SPDYE6P0CI01 402 aa9.42□□□□□ -0.9
RNU4-46P-201ENST00000410818 SPDYE2Q495Y8 402 aa9.42□□□□□ -0.9
RNU4-46P-201ENST00000410818 SSUH2Q9Y2M2 353 aa9.4□□□□□ -0.9
RNU4-46P-201ENST00000410818 ZNF692Q9BU19 519 aaPredicted RBP9.39□□□□□ -0.91
RNU4-46P-201ENST00000410818 PROM2Q8N271 834 aa9.38□□□□□ -0.91
RNU4-46P-201ENST00000410818 RBM42Q9BTD8 480 aaKnown RBP9.34□□□□□ -0.91
RNU4-46P-201ENST00000410818 PABPN1Q86U42 306 aaKnown RBP eCLIP9.3□□□□□ -0.92
RNU4-46P-201ENST00000410818 AKT1S1Q96B36 256 aa9.27□□□□□ -0.93
RNU4-46P-201ENST00000410818 REM2Q8IYK8 340 aaPredicted RBP9.21□□□□□ -0.94
RNU4-46P-201ENST00000410818 PITPNM1O00562 1244 aa9.14□□□□□ -0.95
RNU4-46P-201ENST00000410818 FBXO3Q9UK99 471 aa9.13□□□□□ -0.95
RNU4-46P-201ENST00000410818 SPDYE1Q8NFV5 336 aaPredicted RBP9.12□□□□□ -0.95
RNU4-46P-201ENST00000410818 CLEC11AQ9Y240 323 aa9.09□□□□□ -0.95
RNU4-46P-201ENST00000410818 VASPP50552 380 aaPredicted RBP9.08□□□□□ -0.96
RNU4-46P-201ENST00000410818 STAG3Q9UJ98 1225 aa9.08□□□□□ -0.96
RNU4-46P-201ENST00000410818 PRR29P0C7W0 189 aa8.99□□□□□ -0.97
RNU4-46P-201ENST00000410818 CHRDL2Q6WN34 429 aa8.99□□□□□ -0.97
RNU4-46P-201ENST00000410818 IFNLR1Q8IU57 520 aaPredicted RBP8.98□□□□□ -0.97
RNU4-46P-201ENST00000410818 CREBZFQ9NS37 354 aa8.96□□□□□ -0.98
RNU4-46P-201ENST00000410818 MIER1Q8N108 512 aa8.95□□□□□ -0.98
RNU4-46P-201ENST00000410818 PLCD3Q8N3E9 789 aa8.95□□□□□ -0.98
RNU4-46P-201ENST00000410818 FXR2P51116 673 aaKnown RBP eCLIP8.92□□□□□ -0.98
RNU4-46P-201ENST00000410818 CHADLQ6NUI6 762 aa8.91□□□□□ -0.98
RNU4-46P-201ENST00000410818 PIP4P2Q8N4L2 257 aa8.91□□□□□ -0.98
RNU4-46P-201ENST00000410818 MNX1P50219 401 aaPredicted RBP8.89□□□□□ -0.99
RNU4-46P-201ENST00000410818 PRKAR2AP13861 404 aaKnown RBP8.87□□□□□ -0.99
RNU4-46P-201ENST00000410818 KLHL34Q8N239 644 aa8.85□□□□□ -0.99
RNU4-46P-201ENST00000410818 PLEKHG5O94827 1062 aa8.84□□□□□ -0.99
RNU4-46P-201ENST00000410818 RTN4Q9NQC3 1192 aaKnown RBP8.83□□□□□ -1
RNU4-46P-201ENST00000410818 SPOCK2Q92563 424 aa8.81□□□□□ -1
RNU4-46P-201ENST00000410818 ZBTB47Q9UFB7 747 aaPredicted RBP8.8□□□□□ -1
RNU4-46P-201ENST00000410818 FARP1Q9Y4F1 1045 aaPredicted RBP8.8□□□□□ -1
RNU4-46P-201ENST00000410818 NUBP1P53384 320 aa8.78□□□□□ -1
RNU4-46P-201ENST00000410818 AMER1Q5JTC6 1135 aaPredicted RBP8.77□□□□□ -1.01
RNU4-46P-201ENST00000410818 RASEFQ8IZ41 740 aa8.75□□□□□ -1.01
RNU4-46P-201ENST00000410818 NPM1P06748 294 aaKnown RBP eCLIP8.73□□□□□ -1.01
RNU4-46P-201ENST00000410818 PKD2Q13563 968 aa8.71□□□□□ -1.02
RNU4-46P-201ENST00000410818 FAM212AQ96EL1 285 aa8.66□□□□□ -1.02
RNU4-46P-201ENST00000410818 CIZ1Q9ULV3 898 aaPredicted RBP8.66□□□□□ -1.02
RNU4-46P-201ENST00000410818 DCAF8Q5TAQ9 597 aa8.64□□□□□ -1.03
RNU4-46P-201ENST00000410818 POTEHQ6S545 545 aa8.64□□□□□ -1.03
RNU4-46P-201ENST00000410818 TSPYL2Q9H2G4 693 aaPredicted RBP8.64□□□□□ -1.03
RNU4-46P-201ENST00000410818 C19orf67A6NJJ6 358 aa8.62□□□□□ -1.03
RNU4-46P-201ENST00000410818 CD44P16070 742 aaKnown RBP8.62□□□□□ -1.03
RNU4-46P-201ENST00000410818 GSE1Q14687 1217 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms