RNA–Protein interactions for RNA: ENST00000410782.1

RN7SKP38-201, Transcript of RNA, 7SK small nuclear pseudogene 38, humanhuman

BASIC

Gene RN7SKP38, Length 309 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP38-201ENST00000410782 AEBP2Q6ZN18 517 aaPredicted RBP31.52■■■□□ 2.64
RN7SKP38-201ENST00000410782 CHIC1Q5VXU3 224 aa30.56■■■□□ 2.48
RN7SKP38-201ENST00000410782 SENP3Q9H4L4 574 aaPredicted RBP26.91■■□□□ 1.9
RN7SKP38-201ENST00000410782 PHF23Q9BUL5 403 aaPredicted RBP26.79■■□□□ 1.88
RN7SKP38-201ENST00000410782 FOXD1Q16676 465 aa24.93■■□□□ 1.58
RN7SKP38-201ENST00000410782 PLPPR3Q6T4P5 718 aa24.73■■□□□ 1.55
RN7SKP38-201ENST00000410782 PPP6R1Q9UPN7 881 aa23.73■■□□□ 1.39
RN7SKP38-201ENST00000410782 ADRA2BP18089 450 aa23.69■■□□□ 1.38
RN7SKP38-201ENST00000410782 PIAS4Q8N2W9 510 aaPredicted RBP23.45■■□□□ 1.34
RN7SKP38-201ENST00000410782 MSH5O43196 834 aa23.2■■□□□ 1.3
RN7SKP38-201ENST00000410782 SCAF1Q9H7N4 1312 aaKnown RBP21.83■■□□□ 1.09
RN7SKP38-201ENST00000410782 PPP4R3CPQ6ZMV5 832 aa21.7■■□□□ 1.06
RN7SKP38-201ENST00000410782 MAPK8IP2Q13387 824 aaPredicted RBP21.57■■□□□ 1.04
RN7SKP38-201ENST00000410782 POTEDQ86YR6 584 aa21.57■■□□□ 1.04
RN7SKP38-201ENST00000410782 DMRT2Q9Y5R5 561 aa21.4■■□□□ 1.02
RN7SKP38-201ENST00000410782 CNKSR2Q8WXI2 1034 aa21.21■□□□□ 0.99
RN7SKP38-201ENST00000410782 NCBP3Q53F19 620 aaKnown RBP21.13■□□□□ 0.97
RN7SKP38-201ENST00000410782 RNF216Q9NWF9 866 aaPredicted RBP20.88■□□□□ 0.93
RN7SKP38-201ENST00000410782 HOXD11P31277 338 aaPredicted RBP20.86■□□□□ 0.93
RN7SKP38-201ENST00000410782 KCNA4P22459 653 aa20.8■□□□□ 0.92
RN7SKP38-201ENST00000410782 NPM3O75607 178 aaKnown RBP20.72■□□□□ 0.91
RN7SKP38-201ENST00000410782 DCAF8L1A6NGE4 600 aa20.45■□□□□ 0.86
RN7SKP38-201ENST00000410782 DNAJC5BQ9UF47 199 aa20.29■□□□□ 0.84
RN7SKP38-201ENST00000410782 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.86■□□□□ 0.77
RN7SKP38-201ENST00000410782 RNF39Q9H2S5 420 aa19.81■□□□□ 0.76
RN7SKP38-201ENST00000410782 SLC4A1APQ9BWU0 796 aaKnown RBP19.8■□□□□ 0.76
RN7SKP38-201ENST00000410782 SLC4A2P04920 1241 aa19.62■□□□□ 0.73
RN7SKP38-201ENST00000410782 C1QBPQ07021 282 aaKnown RBP19.61■□□□□ 0.73
RN7SKP38-201ENST00000410782 CACNB1Q02641 598 aaPredicted RBP19.51■□□□□ 0.71
RN7SKP38-201ENST00000410782 EHMT2Q96KQ7 1210 aa19.48■□□□□ 0.71
RN7SKP38-201ENST00000410782 U3KPZ7 1027 aaPredicted RBP19.47■□□□□ 0.71
RN7SKP38-201ENST00000410782 FOXD4L1Q9NU39 408 aa19.3■□□□□ 0.68
RN7SKP38-201ENST00000410782 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.25■□□□□ 0.67
RN7SKP38-201ENST00000410782 HNRNPUL2Q1KMD3 747 aaKnown RBP19.25■□□□□ 0.67
RN7SKP38-201ENST00000410782 MYCNP04198 464 aaPredicted RBP19.2■□□□□ 0.66
RN7SKP38-201ENST00000410782 APLP2Q06481 763 aa19.14■□□□□ 0.65
RN7SKP38-201ENST00000410782 SAMD1Q6SPF0 538 aaPredicted RBP19.13■□□□□ 0.65
RN7SKP38-201ENST00000410782 ZBTB22O15209 634 aa19.1■□□□□ 0.65
RN7SKP38-201ENST00000410782 CSRNP3Q8WYN3 585 aa19.02■□□□□ 0.64
RN7SKP38-201ENST00000410782 SPINK5Q9NQ38 1064 aaPredicted RBP18.99■□□□□ 0.63
RN7SKP38-201ENST00000410782 CAPN15O75808 1086 aa18.97■□□□□ 0.63
RN7SKP38-201ENST00000410782 ZNF219Q9P2Y4 722 aaPredicted RBP18.86■□□□□ 0.61
RN7SKP38-201ENST00000410782 TRHP20396 242 aaPredicted RBP18.79■□□□□ 0.6
RN7SKP38-201ENST00000410782 ATXN8OSP0DMR3 200 aa18.73■□□□□ 0.59
RN7SKP38-201ENST00000410782 DSG3P32926 999 aa18.73■□□□□ 0.59
RN7SKP38-201ENST00000410782 ATF5Q9Y2D1 282 aaPredicted RBP18.61■□□□□ 0.57
RN7SKP38-201ENST00000410782 ABCB7O75027 752 aa18.52■□□□□ 0.56
RN7SKP38-201ENST00000410782 POLA2Q14181 598 aa18.44■□□□□ 0.54
RN7SKP38-201ENST00000410782 ZBTB12Q9Y330 459 aaPredicted RBP18.2■□□□□ 0.5
RN7SKP38-201ENST00000410782 FBLN2P98095 1184 aa17.97■□□□□ 0.47
RN7SKP38-201ENST00000410782 RBM42Q9BTD8 480 aaKnown RBP17.94■□□□□ 0.46
RN7SKP38-201ENST00000410782 MKRN4PQ13434 485 aaPredicted RBP17.81■□□□□ 0.44
RN7SKP38-201ENST00000410782 OSCARQ8IYS5 282 aa17.79■□□□□ 0.44
RN7SKP38-201ENST00000410782 SPDYE2BA6NHP3 402 aa17.66■□□□□ 0.42
RN7SKP38-201ENST00000410782 SPDYE6P0CI01 402 aa17.66■□□□□ 0.42
RN7SKP38-201ENST00000410782 SPDYE2Q495Y8 402 aa17.66■□□□□ 0.42
RN7SKP38-201ENST00000410782 AKT1S1Q96B36 256 aa17.63■□□□□ 0.41
RN7SKP38-201ENST00000410782 ZNF692Q9BU19 519 aaPredicted RBP17.51■□□□□ 0.39
RN7SKP38-201ENST00000410782 SSUH2Q9Y2M2 353 aa17.45■□□□□ 0.38
RN7SKP38-201ENST00000410782 REM2Q8IYK8 340 aaPredicted RBP17.42■□□□□ 0.38
RN7SKP38-201ENST00000410782 SPDYE4A6NLX3 237 aa17.32■□□□□ 0.36
RN7SKP38-201ENST00000410782 CHRDL2Q6WN34 429 aa17.24■□□□□ 0.35
RN7SKP38-201ENST00000410782 PABPN1Q86U42 306 aaKnown RBP eCLIP17.24■□□□□ 0.35
RN7SKP38-201ENST00000410782 SPDYE1Q8NFV5 336 aaPredicted RBP17.2■□□□□ 0.34
RN7SKP38-201ENST00000410782 PITPNM1O00562 1244 aa17.19■□□□□ 0.34
RN7SKP38-201ENST00000410782 FKBP8Q14318 412 aa17.13■□□□□ 0.33
RN7SKP38-201ENST00000410782 CLEC11AQ9Y240 323 aa17.08■□□□□ 0.32
RN7SKP38-201ENST00000410782 POTEHQ6S545 545 aa17.05■□□□□ 0.32
RN7SKP38-201ENST00000410782 PROM2Q8N271 834 aa17■□□□□ 0.31
RN7SKP38-201ENST00000410782 STAG3Q9UJ98 1225 aa17■□□□□ 0.31
RN7SKP38-201ENST00000410782 FXR2P51116 673 aaKnown RBP eCLIP16.98■□□□□ 0.31
RN7SKP38-201ENST00000410782 PIP4P2Q8N4L2 257 aa16.95■□□□□ 0.3
RN7SKP38-201ENST00000410782 PRR29P0C7W0 189 aa16.93■□□□□ 0.3
RN7SKP38-201ENST00000410782 NISCHQ9Y2I1 1504 aa16.83■□□□□ 0.28
RN7SKP38-201ENST00000410782 PRKAR2AP13861 404 aaKnown RBP16.77■□□□□ 0.28
RN7SKP38-201ENST00000410782 CHADLQ6NUI6 762 aa16.65■□□□□ 0.26
RN7SKP38-201ENST00000410782 CREBZFQ9NS37 354 aa16.6■□□□□ 0.25
RN7SKP38-201ENST00000410782 FBXO3Q9UK99 471 aa16.59■□□□□ 0.25
RN7SKP38-201ENST00000410782 RTN4Q9NQC3 1192 aaKnown RBP16.56■□□□□ 0.24
RN7SKP38-201ENST00000410782 FARP1Q9Y4F1 1045 aaPredicted RBP16.54■□□□□ 0.24
RN7SKP38-201ENST00000410782 AMER1Q5JTC6 1135 aaPredicted RBP16.51■□□□□ 0.23
RN7SKP38-201ENST00000410782 HAX1O00165 279 aa16.5■□□□□ 0.23
RN7SKP38-201ENST00000410782 PLEKHG5O94827 1062 aa16.47■□□□□ 0.23
RN7SKP38-201ENST00000410782 MIER1Q8N108 512 aa16.46■□□□□ 0.23
RN7SKP38-201ENST00000410782 PLCD3Q8N3E9 789 aa16.41■□□□□ 0.22
RN7SKP38-201ENST00000410782 C19orf67A6NJJ6 358 aa16.4■□□□□ 0.22
RN7SKP38-201ENST00000410782 NPM1P06748 294 aaKnown RBP eCLIP16.4■□□□□ 0.22
RN7SKP38-201ENST00000410782 MNX1P50219 401 aaPredicted RBP16.39■□□□□ 0.21
RN7SKP38-201ENST00000410782 ZBTB47Q9UFB7 747 aaPredicted RBP16.32■□□□□ 0.2
RN7SKP38-201ENST00000410782 VASPP50552 380 aaPredicted RBP16.3■□□□□ 0.2
RN7SKP38-201ENST00000410782 CD44P16070 742 aaKnown RBP16.28■□□□□ 0.2
RN7SKP38-201ENST00000410782 EVX2Q03828 476 aa16.26■□□□□ 0.19
RN7SKP38-201ENST00000410782 SP7Q8TDD2 431 aaPredicted RBP16.26■□□□□ 0.19
RN7SKP38-201ENST00000410782 PAK3O75914 559 aaPredicted RBP16.19■□□□□ 0.18
RN7SKP38-201ENST00000410782 ZRANB1Q9UGI0 708 aa16.13■□□□□ 0.17
RN7SKP38-201ENST00000410782 CLCN6P51797 869 aa16.1■□□□□ 0.17
RN7SKP38-201ENST00000410782 KLHL34Q8N239 644 aa16.1■□□□□ 0.17
RN7SKP38-201ENST00000410782 ZNF579Q8NAF0 562 aaKnown RBP16.07■□□□□ 0.16
RN7SKP38-201ENST00000410782 NUBP1P53384 320 aa16.06■□□□□ 0.16
RN7SKP38-201ENST00000410782 IFNLR1Q8IU57 520 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms