RNA–Protein interactions for RNA: ENST00000410735.1

RNU6-394P-201, Transcript of RNA, U6 small nuclear 394, pseudogene, humanhuman

BASIC

Gene RNU6-394P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-394P-201ENST00000410735 AEBP2Q6ZN18 517 aaPredicted RBP17.55■□□□□ 0.4
RNU6-394P-201ENST00000410735 CHIC1Q5VXU3 224 aa16.37■□□□□ 0.21
RNU6-394P-201ENST00000410735 SENP3Q9H4L4 574 aaPredicted RBP14.99□□□□□ -0.01
RNU6-394P-201ENST00000410735 PHF23Q9BUL5 403 aaPredicted RBP14.8□□□□□ -0.04
RNU6-394P-201ENST00000410735 FOXD1Q16676 465 aa14.07□□□□□ -0.16
RNU6-394P-201ENST00000410735 POTEDQ86YR6 584 aa13.99□□□□□ -0.17
RNU6-394P-201ENST00000410735 MSH5O43196 834 aa13.26□□□□□ -0.29
RNU6-394P-201ENST00000410735 PIAS4Q8N2W9 510 aaPredicted RBP13.06□□□□□ -0.32
RNU6-394P-201ENST00000410735 PPP6R1Q9UPN7 881 aa12.89□□□□□ -0.35
RNU6-394P-201ENST00000410735 ADRA2BP18089 450 aa12.83□□□□□ -0.36
RNU6-394P-201ENST00000410735 PLPPR3Q6T4P5 718 aa12.81□□□□□ -0.36
RNU6-394P-201ENST00000410735 MAPK8IP2Q13387 824 aaPredicted RBP11.93□□□□□ -0.5
RNU6-394P-201ENST00000410735 DMRT2Q9Y5R5 561 aa11.82□□□□□ -0.52
RNU6-394P-201ENST00000410735 CACNB1Q02641 598 aaPredicted RBP11.71□□□□□ -0.53
RNU6-394P-201ENST00000410735 SCAF1Q9H7N4 1312 aaKnown RBP11.69□□□□□ -0.54
RNU6-394P-201ENST00000410735 DCAF8L1A6NGE4 600 aa11.49□□□□□ -0.57
RNU6-394P-201ENST00000410735 RNF39Q9H2S5 420 aa11.29□□□□□ -0.6
RNU6-394P-201ENST00000410735 HOXD11P31277 338 aaPredicted RBP11.22□□□□□ -0.61
RNU6-394P-201ENST00000410735 PPP4R3CPQ6ZMV5 832 aa11.21□□□□□ -0.61
RNU6-394P-201ENST00000410735 C1QBPQ07021 282 aaKnown RBP11.1□□□□□ -0.63
RNU6-394P-201ENST00000410735 CNKSR2Q8WXI2 1034 aa11.06□□□□□ -0.64
RNU6-394P-201ENST00000410735 RNF216Q9NWF9 866 aaPredicted RBP11.04□□□□□ -0.64
RNU6-394P-201ENST00000410735 DNAJC5BQ9UF47 199 aa10.84□□□□□ -0.67
RNU6-394P-201ENST00000410735 POTEHQ6S545 545 aa10.78□□□□□ -0.68
RNU6-394P-201ENST00000410735 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.78□□□□□ -0.68
RNU6-394P-201ENST00000410735 NCBP3Q53F19 620 aaKnown RBP10.63□□□□□ -0.71
RNU6-394P-201ENST00000410735 NPM3O75607 178 aaKnown RBP10.5□□□□□ -0.73
RNU6-394P-201ENST00000410735 CAPN15O75808 1086 aa10.48□□□□□ -0.73
RNU6-394P-201ENST00000410735 SPINK5Q9NQ38 1064 aaPredicted RBP10.47□□□□□ -0.73
RNU6-394P-201ENST00000410735 DSG3P32926 999 aa10.46□□□□□ -0.73
RNU6-394P-201ENST00000410735 U3KPZ7 1027 aaPredicted RBP10.46□□□□□ -0.73
RNU6-394P-201ENST00000410735 TRHP20396 242 aaPredicted RBP10.25□□□□□ -0.77
RNU6-394P-201ENST00000410735 ABCB7O75027 752 aa10.22□□□□□ -0.77
RNU6-394P-201ENST00000410735 SLC4A2P04920 1241 aa10.12□□□□□ -0.79
RNU6-394P-201ENST00000410735 ZNF219Q9P2Y4 722 aaPredicted RBP10.11□□□□□ -0.79
RNU6-394P-201ENST00000410735 APLP2Q06481 763 aa10.08□□□□□ -0.8
RNU6-394P-201ENST00000410735 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.99□□□□□ -0.81
RNU6-394P-201ENST00000410735 HNRNPUL2Q1KMD3 747 aaKnown RBP9.99□□□□□ -0.81
RNU6-394P-201ENST00000410735 KCNA4P22459 653 aa9.97□□□□□ -0.81
RNU6-394P-201ENST00000410735 RBM42Q9BTD8 480 aaKnown RBP9.96□□□□□ -0.82
RNU6-394P-201ENST00000410735 CHRDL2Q6WN34 429 aa9.94□□□□□ -0.82
RNU6-394P-201ENST00000410735 SAMD1Q6SPF0 538 aaPredicted RBP9.92□□□□□ -0.82
RNU6-394P-201ENST00000410735 POLA2Q14181 598 aa9.86□□□□□ -0.83
RNU6-394P-201ENST00000410735 SP7Q8TDD2 431 aaPredicted RBP9.77□□□□□ -0.85
RNU6-394P-201ENST00000410735 MYCNP04198 464 aaPredicted RBP9.68□□□□□ -0.86
RNU6-394P-201ENST00000410735 AKT1S1Q96B36 256 aa9.66□□□□□ -0.86
RNU6-394P-201ENST00000410735 PIP4P2Q8N4L2 257 aa9.63□□□□□ -0.87
RNU6-394P-201ENST00000410735 HAX1O00165 279 aa9.62□□□□□ -0.87
RNU6-394P-201ENST00000410735 REM2Q8IYK8 340 aaPredicted RBP9.61□□□□□ -0.87
RNU6-394P-201ENST00000410735 ATF5Q9Y2D1 282 aaPredicted RBP9.57□□□□□ -0.88
RNU6-394P-201ENST00000410735 ZBTB12Q9Y330 459 aaPredicted RBP9.53□□□□□ -0.88
RNU6-394P-201ENST00000410735 OSCARQ8IYS5 282 aa9.52□□□□□ -0.89
RNU6-394P-201ENST00000410735 PITPNM1O00562 1244 aa9.5□□□□□ -0.89
RNU6-394P-201ENST00000410735 FXR2P51116 673 aaKnown RBP eCLIP9.48□□□□□ -0.89
RNU6-394P-201ENST00000410735 EVX2Q03828 476 aa9.46□□□□□ -0.9
RNU6-394P-201ENST00000410735 FOXD4L1Q9NU39 408 aa9.37□□□□□ -0.91
RNU6-394P-201ENST00000410735 SLC4A1APQ9BWU0 796 aaKnown RBP9.32□□□□□ -0.92
RNU6-394P-201ENST00000410735 PLSCR2Q9NRY7 297 aa9.29□□□□□ -0.92
RNU6-394P-201ENST00000410735 PRKAR2AP13861 404 aaKnown RBP9.28□□□□□ -0.92
RNU6-394P-201ENST00000410735 CLEC11AQ9Y240 323 aa9.27□□□□□ -0.93
RNU6-394P-201ENST00000410735 SPDYE2BA6NHP3 402 aa9.22□□□□□ -0.93
RNU6-394P-201ENST00000410735 SPDYE6P0CI01 402 aa9.22□□□□□ -0.93
RNU6-394P-201ENST00000410735 SPDYE2Q495Y8 402 aa9.22□□□□□ -0.93
RNU6-394P-201ENST00000410735 GABBR2O75899 941 aa9.2□□□□□ -0.94
RNU6-394P-201ENST00000410735 LHX8Q68G74 356 aa9.19□□□□□ -0.94
RNU6-394P-201ENST00000410735 C19orf67A6NJJ6 358 aa9.18□□□□□ -0.94
RNU6-394P-201ENST00000410735 FBLN2P98095 1184 aa9.18□□□□□ -0.94
RNU6-394P-201ENST00000410735 SPDYE1Q8NFV5 336 aaPredicted RBP9.18□□□□□ -0.94
RNU6-394P-201ENST00000410735 ZBTB22O15209 634 aa9.14□□□□□ -0.95
RNU6-394P-201ENST00000410735 CHADLQ6NUI6 762 aa9.13□□□□□ -0.95
RNU6-394P-201ENST00000410735 ZNF692Q9BU19 519 aaPredicted RBP9.12□□□□□ -0.95
RNU6-394P-201ENST00000410735 ATXN8OSP0DMR3 200 aa9.09□□□□□ -0.95
RNU6-394P-201ENST00000410735 MKRN4PQ13434 485 aaPredicted RBP9.06□□□□□ -0.96
RNU6-394P-201ENST00000410735 SSUH2Q9Y2M2 353 aa9.04□□□□□ -0.96
RNU6-394P-201ENST00000410735 PRR29P0C7W0 189 aa9.03□□□□□ -0.96
RNU6-394P-201ENST00000410735 POTEIP0CG38 1075 aa8.99□□□□□ -0.97
RNU6-394P-201ENST00000410735 PABPN1Q86U42 306 aaKnown RBP eCLIP8.96□□□□□ -0.98
RNU6-394P-201ENST00000410735 CD44P16070 742 aaKnown RBP8.94□□□□□ -0.98
RNU6-394P-201ENST00000410735 FARP1Q9Y4F1 1045 aaPredicted RBP8.9□□□□□ -0.98
RNU6-394P-201ENST00000410735 DCBLD2Q96PD2 775 aa8.88□□□□□ -0.99
RNU6-394P-201ENST00000410735 CLCN6P51797 869 aa8.82□□□□□ -1
RNU6-394P-201ENST00000410735 ZRANB1Q9UGI0 708 aa8.79□□□□□ -1
RNU6-394P-201ENST00000410735 OTUD5Q96G74 571 aa8.74□□□□□ -1.01
RNU6-394P-201ENST00000410735 GALR2O43603 387 aaPredicted RBP8.73□□□□□ -1.01
RNU6-394P-201ENST00000410735 ZNF579Q8NAF0 562 aaKnown RBP8.73□□□□□ -1.01
RNU6-394P-201ENST00000410735 POTEB2H3BUK9 544 aa8.7□□□□□ -1.02
RNU6-394P-201ENST00000410735 POTEMA6NI47 508 aa8.68□□□□□ -1.02
RNU6-394P-201ENST00000410735 CREBZFQ9NS37 354 aa8.67□□□□□ -1.02
RNU6-394P-201ENST00000410735 POTEGQ6S5H5 508 aa8.64□□□□□ -1.03
RNU6-394P-201ENST00000410735 PHF12Q96QT6 1004 aa8.62□□□□□ -1.03
RNU6-394P-201ENST00000410735 PAK3O75914 559 aaPredicted RBP8.6□□□□□ -1.03
RNU6-394P-201ENST00000410735 PELP1Q8IZL8 1130 aaKnown RBP8.6□□□□□ -1.03
RNU6-394P-201ENST00000410735 STAG3Q9UJ98 1225 aa8.58□□□□□ -1.04
RNU6-394P-201ENST00000410735 PCDH10Q9P2E7 1040 aa8.53□□□□□ -1.04
RNU6-394P-201ENST00000410735 METRNQ9UJH8 293 aa8.51□□□□□ -1.05
RNU6-394P-201ENST00000410735 NPM1P06748 294 aaKnown RBP eCLIP8.5□□□□□ -1.05
RNU6-394P-201ENST00000410735 POTEJP0CG39 1038 aa8.5□□□□□ -1.05
RNU6-394P-201ENST00000410735 FAM163AQ96GL9 167 aaPredicted RBP8.5□□□□□ -1.05
RNU6-394P-201ENST00000410735 C7P10643 843 aa8.47□□□□□ -1.05
RNU6-394P-201ENST00000410735 MS4A3Q96HJ5 214 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 360.6 ms