RNA–Protein interactions for RNA: ENST00000409473.2

PPM1B-206, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 5

Gene PPM1B, Length 923 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-206ENST00000409473 AEBP2Q6ZN18 517 aaPredicted RBP28.16■■■□□ 2.1
PPM1B-206ENST00000409473 CHIC1Q5VXU3 224 aa27.31■■□□□ 1.96
PPM1B-206ENST00000409473 PHF23Q9BUL5 403 aaPredicted RBP24.08■■□□□ 1.45
PPM1B-206ENST00000409473 SENP3Q9H4L4 574 aaPredicted RBP23.77■■□□□ 1.4
PPM1B-206ENST00000409473 FOXD1Q16676 465 aa22.17■■□□□ 1.14
PPM1B-206ENST00000409473 PLPPR3Q6T4P5 718 aa22.04■■□□□ 1.12
PPM1B-206ENST00000409473 PPP6R1Q9UPN7 881 aa21.28■■□□□ 1
PPM1B-206ENST00000409473 ADRA2BP18089 450 aa21.18■□□□□ 0.98
PPM1B-206ENST00000409473 PIAS4Q8N2W9 510 aaPredicted RBP20.78■□□□□ 0.92
PPM1B-206ENST00000409473 MSH5O43196 834 aa20.38■□□□□ 0.85
PPM1B-206ENST00000409473 PPP4R3CPQ6ZMV5 832 aa19.44■□□□□ 0.7
PPM1B-206ENST00000409473 MAPK8IP2Q13387 824 aaPredicted RBP19.28■□□□□ 0.68
PPM1B-206ENST00000409473 SCAF1Q9H7N4 1312 aaKnown RBP19.24■□□□□ 0.67
PPM1B-206ENST00000409473 DMRT2Q9Y5R5 561 aa19.01■□□□□ 0.63
PPM1B-206ENST00000409473 CNKSR2Q8WXI2 1034 aa18.9■□□□□ 0.62
PPM1B-206ENST00000409473 KCNA4P22459 653 aa18.89■□□□□ 0.61
PPM1B-206ENST00000409473 POTEDQ86YR6 584 aa18.87■□□□□ 0.61
PPM1B-206ENST00000409473 NCBP3Q53F19 620 aaKnown RBP18.78■□□□□ 0.6
PPM1B-206ENST00000409473 NPM3O75607 178 aaKnown RBP18.66■□□□□ 0.58
PPM1B-206ENST00000409473 HOXD11P31277 338 aaPredicted RBP18.59■□□□□ 0.57
PPM1B-206ENST00000409473 RNF216Q9NWF9 866 aaPredicted RBP18.59■□□□□ 0.57
PPM1B-206ENST00000409473 DNAJC5BQ9UF47 199 aa18.22■□□□□ 0.51
PPM1B-206ENST00000409473 DCAF8L1A6NGE4 600 aa18.03■□□□□ 0.48
PPM1B-206ENST00000409473 SLC4A1APQ9BWU0 796 aaKnown RBP17.87■□□□□ 0.45
PPM1B-206ENST00000409473 EHMT2Q96KQ7 1210 aa17.76■□□□□ 0.43
PPM1B-206ENST00000409473 SLC4A2P04920 1241 aa17.7■□□□□ 0.42
PPM1B-206ENST00000409473 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.57■□□□□ 0.4
PPM1B-206ENST00000409473 RNF39Q9H2S5 420 aa17.54■□□□□ 0.4
PPM1B-206ENST00000409473 ZBTB22O15209 634 aa17.45■□□□□ 0.38
PPM1B-206ENST00000409473 U3KPZ7 1027 aaPredicted RBP17.41■□□□□ 0.38
PPM1B-206ENST00000409473 FOXD4L1Q9NU39 408 aa17.36■□□□□ 0.37
PPM1B-206ENST00000409473 CSRNP3Q8WYN3 585 aa17.29■□□□□ 0.36
PPM1B-206ENST00000409473 C1QBPQ07021 282 aaKnown RBP17.26■□□□□ 0.35
PPM1B-206ENST00000409473 MYCNP04198 464 aaPredicted RBP17.17■□□□□ 0.34
PPM1B-206ENST00000409473 CACNB1Q02641 598 aaPredicted RBP17.05■□□□□ 0.32
PPM1B-206ENST00000409473 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.99■□□□□ 0.31
PPM1B-206ENST00000409473 HNRNPUL2Q1KMD3 747 aaKnown RBP16.99■□□□□ 0.31
PPM1B-206ENST00000409473 SAMD1Q6SPF0 538 aaPredicted RBP16.96■□□□□ 0.31
PPM1B-206ENST00000409473 SPINK5Q9NQ38 1064 aaPredicted RBP16.95■□□□□ 0.3
PPM1B-206ENST00000409473 ATF5Q9Y2D1 282 aaPredicted RBP16.84■□□□□ 0.29
PPM1B-206ENST00000409473 APLP2Q06481 763 aa16.79■□□□□ 0.28
PPM1B-206ENST00000409473 CAPN15O75808 1086 aa16.77■□□□□ 0.28
PPM1B-206ENST00000409473 ATXN8OSP0DMR3 200 aa16.76■□□□□ 0.27
PPM1B-206ENST00000409473 TRHP20396 242 aaPredicted RBP16.67■□□□□ 0.26
PPM1B-206ENST00000409473 ZNF219Q9P2Y4 722 aaPredicted RBP16.67■□□□□ 0.26
PPM1B-206ENST00000409473 DSG3P32926 999 aa16.64■□□□□ 0.25
PPM1B-206ENST00000409473 ABCB7O75027 752 aa16.49■□□□□ 0.23
PPM1B-206ENST00000409473 POLA2Q14181 598 aa16.42■□□□□ 0.22
PPM1B-206ENST00000409473 MKRN4PQ13434 485 aaPredicted RBP16.11■□□□□ 0.17
PPM1B-206ENST00000409473 ZBTB12Q9Y330 459 aaPredicted RBP16.07■□□□□ 0.16
PPM1B-206ENST00000409473 FBLN2P98095 1184 aa15.94■□□□□ 0.14
PPM1B-206ENST00000409473 OSCARQ8IYS5 282 aa15.89■□□□□ 0.13
PPM1B-206ENST00000409473 RBM42Q9BTD8 480 aaKnown RBP15.74■□□□□ 0.11
PPM1B-206ENST00000409473 SPDYE2BA6NHP3 402 aa15.69■□□□□ 0.1
PPM1B-206ENST00000409473 SPDYE6P0CI01 402 aa15.69■□□□□ 0.1
PPM1B-206ENST00000409473 SPDYE2Q495Y8 402 aa15.69■□□□□ 0.1
PPM1B-206ENST00000409473 SSUH2Q9Y2M2 353 aa15.63■□□□□ 0.09
PPM1B-206ENST00000409473 FKBP8Q14318 412 aa15.62■□□□□ 0.09
PPM1B-206ENST00000409473 AKT1S1Q96B36 256 aa15.58■□□□□ 0.08
PPM1B-206ENST00000409473 ZNF692Q9BU19 519 aaPredicted RBP15.57■□□□□ 0.08
PPM1B-206ENST00000409473 SPDYE4A6NLX3 237 aa15.55■□□□□ 0.08
PPM1B-206ENST00000409473 REM2Q8IYK8 340 aaPredicted RBP15.45■□□□□ 0.06
PPM1B-206ENST00000409473 PROM2Q8N271 834 aa15.43■□□□□ 0.06
PPM1B-206ENST00000409473 PABPN1Q86U42 306 aaKnown RBP eCLIP15.39■□□□□ 0.05
PPM1B-206ENST00000409473 PITPNM1O00562 1244 aa15.29■□□□□ 0.04
PPM1B-206ENST00000409473 AMER1Q5JTC6 1135 aaPredicted RBP15.23■□□□□ 0.03
PPM1B-206ENST00000409473 SPDYE1Q8NFV5 336 aaPredicted RBP15.22■□□□□ 0.03
PPM1B-206ENST00000409473 CHRDL2Q6WN34 429 aa15.2■□□□□ 0.02
PPM1B-206ENST00000409473 RTN4Q9NQC3 1192 aaKnown RBP15.16■□□□□ 0.02
PPM1B-206ENST00000409473 CLEC11AQ9Y240 323 aa15.12■□□□□ 0.01
PPM1B-206ENST00000409473 FXR2P51116 673 aaKnown RBP eCLIP15.06■□□□□ 07e-8■■□□□ 11.9
PPM1B-206ENST00000409473 STAG3Q9UJ98 1225 aa15.05■□□□□ -0
PPM1B-206ENST00000409473 PIP4P2Q8N4L2 257 aa15.02■□□□□ -0
PPM1B-206ENST00000409473 PRR29P0C7W0 189 aa14.98□□□□□ -0.01
PPM1B-206ENST00000409473 FBXO3Q9UK99 471 aa14.94□□□□□ -0.02
PPM1B-206ENST00000409473 CREBZFQ9NS37 354 aa14.89□□□□□ -0.03
PPM1B-206ENST00000409473 POTEHQ6S545 545 aa14.88□□□□□ -0.03
PPM1B-206ENST00000409473 PRKAR2AP13861 404 aaKnown RBP14.85□□□□□ -0.03
PPM1B-206ENST00000409473 CHADLQ6NUI6 762 aa14.85□□□□□ -0.03
PPM1B-206ENST00000409473 MNX1P50219 401 aaPredicted RBP14.78□□□□□ -0.04
PPM1B-206ENST00000409473 VASPP50552 380 aaPredicted RBP14.76□□□□□ -0.05
PPM1B-206ENST00000409473 MIER1Q8N108 512 aa14.7□□□□□ -0.06
PPM1B-206ENST00000409473 FARP1Q9Y4F1 1045 aaPredicted RBP14.7□□□□□ -0.06
PPM1B-206ENST00000409473 PLCD3Q8N3E9 789 aa14.65□□□□□ -0.06
PPM1B-206ENST00000409473 SLC24A1O60721 1099 aa14.62□□□□□ -0.07
PPM1B-206ENST00000409473 IFNLR1Q8IU57 520 aaPredicted RBP14.6□□□□□ -0.07
PPM1B-206ENST00000409473 C19orf67A6NJJ6 358 aa14.54□□□□□ -0.08
PPM1B-206ENST00000409473 PLEKHG5O94827 1062 aa14.53□□□□□ -0.08
PPM1B-206ENST00000409473 EVX2Q03828 476 aa14.5□□□□□ -0.09
PPM1B-206ENST00000409473 NPM1P06748 294 aaKnown RBP eCLIP14.49□□□□□ -0.09
PPM1B-206ENST00000409473 NUBP1P53384 320 aa14.48□□□□□ -0.09
PPM1B-206ENST00000409473 ZBTB47Q9UFB7 747 aaPredicted RBP14.48□□□□□ -0.09
PPM1B-206ENST00000409473 HAX1O00165 279 aa14.46□□□□□ -0.09
PPM1B-206ENST00000409473 RASEFQ8IZ41 740 aa14.43□□□□□ -0.1
PPM1B-206ENST00000409473 CD44P16070 742 aaKnown RBP14.41□□□□□ -0.1
PPM1B-206ENST00000409473 KLHL34Q8N239 644 aa14.41□□□□□ -0.1
PPM1B-206ENST00000409473 SPOCK2Q92563 424 aa14.35□□□□□ -0.11
PPM1B-206ENST00000409473 ZRANB1Q9UGI0 708 aa14.3□□□□□ -0.12
PPM1B-206ENST00000409473 CCDC61Q9Y6R9 512 aa14.3□□□□□ -0.12
PPM1B-206ENST00000409473 TSPYL2Q9H2G4 693 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms