RNA–Protein interactions for RNA: ENST00000409139.5

CYTOR-203, cytoskeleton regulator RNA, humanhuman

TSL 3

Gene CYTOR, Length 519 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTOR-203ENST00000409139 AEBP2Q6ZN18 517 aaPredicted RBP23.99■■□□□ 1.43
CYTOR-203ENST00000409139 CHIC1Q5VXU3 224 aa23.03■■□□□ 1.28
CYTOR-203ENST00000409139 SENP3Q9H4L4 574 aaPredicted RBP20.35■□□□□ 0.85
CYTOR-203ENST00000409139 PHF23Q9BUL5 403 aaPredicted RBP20.26■□□□□ 0.83
CYTOR-203ENST00000409139 POTEDQ86YR6 584 aa19.18■□□□□ 0.66
CYTOR-203ENST00000409139 FOXD1Q16676 465 aa19.02■□□□□ 0.64
CYTOR-203ENST00000409139 PLPPR3Q6T4P5 718 aa18.5■□□□□ 0.55
CYTOR-203ENST00000409139 MSH5O43196 834 aa18.17■□□□□ 0.5
CYTOR-203ENST00000409139 PPP6R1Q9UPN7 881 aa18■□□□□ 0.47
CYTOR-203ENST00000409139 ADRA2BP18089 450 aa17.93■□□□□ 0.46
CYTOR-203ENST00000409139 PIAS4Q8N2W9 510 aaPredicted RBP17.76■□□□□ 0.43
CYTOR-203ENST00000409139 MAPK8IP2Q13387 824 aaPredicted RBP16.4■□□□□ 0.22
CYTOR-203ENST00000409139 SCAF1Q9H7N4 1312 aaKnown RBP16.35■□□□□ 0.21
CYTOR-203ENST00000409139 PPP4R3CPQ6ZMV5 832 aa16.28■□□□□ 0.2
CYTOR-203ENST00000409139 DMRT2Q9Y5R5 561 aa16.21■□□□□ 0.19
CYTOR-203ENST00000409139 CACNB1Q02641 598 aaPredicted RBP16.18■□□□□ 0.18
CYTOR-203ENST00000409139 CNKSR2Q8WXI2 1034 aa15.89■□□□□ 0.13
CYTOR-203ENST00000409139 HOXD11P31277 338 aaPredicted RBP15.74■□□□□ 0.11
CYTOR-203ENST00000409139 NCBP3Q53F19 620 aaKnown RBP15.7■□□□□ 0.1
CYTOR-203ENST00000409139 RNF216Q9NWF9 866 aaPredicted RBP15.69■□□□□ 0.1
CYTOR-203ENST00000409139 NPM3O75607 178 aaKnown RBP15.52■□□□□ 0.08
CYTOR-203ENST00000409139 DCAF8L1A6NGE4 600 aa15.49■□□□□ 0.07
CYTOR-203ENST00000409139 KCNA4P22459 653 aa15.49■□□□□ 0.07
CYTOR-203ENST00000409139 RNF39Q9H2S5 420 aa15.38■□□□□ 0.05
CYTOR-203ENST00000409139 DNAJC5BQ9UF47 199 aa15.16■□□□□ 0.02
CYTOR-203ENST00000409139 C1QBPQ07021 282 aaKnown RBP15.14■□□□□ 0.01
CYTOR-203ENST00000409139 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.94□□□□□ -0.02
CYTOR-203ENST00000409139 POTEHQ6S545 545 aa14.89□□□□□ -0.03
CYTOR-203ENST00000409139 SLC4A2P04920 1241 aa14.78□□□□□ -0.04
CYTOR-203ENST00000409139 U3KPZ7 1027 aaPredicted RBP14.71□□□□□ -0.05
CYTOR-203ENST00000409139 SLC4A1APQ9BWU0 796 aaKnown RBP14.65□□□□□ -0.06
CYTOR-203ENST00000409139 SPINK5Q9NQ38 1064 aaPredicted RBP14.41□□□□□ -0.1
CYTOR-203ENST00000409139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.33□□□□□ -0.12
CYTOR-203ENST00000409139 HNRNPUL2Q1KMD3 747 aaKnown RBP14.33□□□□□ -0.12
CYTOR-203ENST00000409139 FOXD4L1Q9NU39 408 aa14.33□□□□□ -0.12
CYTOR-203ENST00000409139 CAPN15O75808 1086 aa14.32□□□□□ -0.12
CYTOR-203ENST00000409139 MYCNP04198 464 aaPredicted RBP14.32□□□□□ -0.12
CYTOR-203ENST00000409139 ZBTB22O15209 634 aa14.28□□□□□ -0.12
CYTOR-203ENST00000409139 SAMD1Q6SPF0 538 aaPredicted RBP14.28□□□□□ -0.12
CYTOR-203ENST00000409139 APLP2Q06481 763 aa14.25□□□□□ -0.13
CYTOR-203ENST00000409139 DSG3P32926 999 aa14.22□□□□□ -0.13
CYTOR-203ENST00000409139 TRHP20396 242 aaPredicted RBP14.17□□□□□ -0.14
CYTOR-203ENST00000409139 ZNF219Q9P2Y4 722 aaPredicted RBP14.14□□□□□ -0.15
CYTOR-203ENST00000409139 ABCB7O75027 752 aa14.03□□□□□ -0.16
CYTOR-203ENST00000409139 ATF5Q9Y2D1 282 aaPredicted RBP14.02□□□□□ -0.17
CYTOR-203ENST00000409139 ATXN8OSP0DMR3 200 aa13.88□□□□□ -0.19
CYTOR-203ENST00000409139 POLA2Q14181 598 aa13.88□□□□□ -0.19
CYTOR-203ENST00000409139 CSRNP3Q8WYN3 585 aa13.87□□□□□ -0.19
CYTOR-203ENST00000409139 EHMT2Q96KQ7 1210 aa13.79□□□□□ -0.2
CYTOR-203ENST00000409139 CHRDL2Q6WN34 429 aa13.58□□□□□ -0.24
CYTOR-203ENST00000409139 ZBTB12Q9Y330 459 aaPredicted RBP13.58□□□□□ -0.24
CYTOR-203ENST00000409139 SP7Q8TDD2 431 aaPredicted RBP13.54□□□□□ -0.24
CYTOR-203ENST00000409139 RBM42Q9BTD8 480 aaKnown RBP13.54□□□□□ -0.24
CYTOR-203ENST00000409139 OSCARQ8IYS5 282 aa13.42□□□□□ -0.26
CYTOR-203ENST00000409139 MKRN4PQ13434 485 aaPredicted RBP13.4□□□□□ -0.26
CYTOR-203ENST00000409139 FBLN2P98095 1184 aa13.37□□□□□ -0.27
CYTOR-203ENST00000409139 AKT1S1Q96B36 256 aa13.28□□□□□ -0.28
CYTOR-203ENST00000409139 SPDYE2BA6NHP3 402 aa13.21□□□□□ -0.29
CYTOR-203ENST00000409139 SPDYE6P0CI01 402 aa13.21□□□□□ -0.29
CYTOR-203ENST00000409139 SPDYE2Q495Y8 402 aa13.21□□□□□ -0.29
CYTOR-203ENST00000409139 REM2Q8IYK8 340 aaPredicted RBP13.18□□□□□ -0.3
CYTOR-203ENST00000409139 HAX1O00165 279 aa13.14□□□□□ -0.31
CYTOR-203ENST00000409139 ZNF692Q9BU19 519 aaPredicted RBP13.1□□□□□ -0.31
CYTOR-203ENST00000409139 SSUH2Q9Y2M2 353 aa13.1□□□□□ -0.31
CYTOR-203ENST00000409139 PIP4P2Q8N4L2 257 aa13.07□□□□□ -0.32
CYTOR-203ENST00000409139 PITPNM1O00562 1244 aa13.03□□□□□ -0.32
CYTOR-203ENST00000409139 PABPN1Q86U42 306 aaKnown RBP eCLIP12.92□□□□□ -0.34
CYTOR-203ENST00000409139 SPDYE1Q8NFV5 336 aaPredicted RBP12.89□□□□□ -0.35
CYTOR-203ENST00000409139 FXR2P51116 673 aaKnown RBP eCLIP12.87□□□□□ -0.35
CYTOR-203ENST00000409139 SPDYE4A6NLX3 237 aa12.86□□□□□ -0.35
CYTOR-203ENST00000409139 CLEC11AQ9Y240 323 aa12.85□□□□□ -0.35
CYTOR-203ENST00000409139 EVX2Q03828 476 aa12.82□□□□□ -0.36
CYTOR-203ENST00000409139 LHX8Q68G74 356 aa12.72□□□□□ -0.37
CYTOR-203ENST00000409139 PLSCR2Q9NRY7 297 aa12.7□□□□□ -0.38
CYTOR-203ENST00000409139 PRR29P0C7W0 189 aa12.69□□□□□ -0.38
CYTOR-203ENST00000409139 PRKAR2AP13861 404 aaKnown RBP12.68□□□□□ -0.38
CYTOR-203ENST00000409139 PROM2Q8N271 834 aa12.65□□□□□ -0.38
CYTOR-203ENST00000409139 CHADLQ6NUI6 762 aa12.61□□□□□ -0.39
CYTOR-203ENST00000409139 STAG3Q9UJ98 1225 aa12.61□□□□□ -0.39
CYTOR-203ENST00000409139 FKBP8Q14318 412 aa12.52□□□□□ -0.41
CYTOR-203ENST00000409139 GABBR2O75899 941 aa12.51□□□□□ -0.41
CYTOR-203ENST00000409139 CREBZFQ9NS37 354 aa12.49□□□□□ -0.41
CYTOR-203ENST00000409139 FARP1Q9Y4F1 1045 aaPredicted RBP12.46□□□□□ -0.41
CYTOR-203ENST00000409139 C19orf67A6NJJ6 358 aa12.45□□□□□ -0.42
CYTOR-203ENST00000409139 MNX1P50219 401 aaPredicted RBP12.34□□□□□ -0.43
CYTOR-203ENST00000409139 CD44P16070 742 aaKnown RBP12.29□□□□□ -0.44
CYTOR-203ENST00000409139 MIER1Q8N108 512 aa12.23□□□□□ -0.45
CYTOR-203ENST00000409139 NPM1P06748 294 aaKnown RBP eCLIP12.21□□□□□ -0.45
CYTOR-203ENST00000409139 POTEIP0CG38 1075 aa12.19□□□□□ -0.46
CYTOR-203ENST00000409139 ZRANB1Q9UGI0 708 aa12.16□□□□□ -0.46
CYTOR-203ENST00000409139 FBXO3Q9UK99 471 aa12.15□□□□□ -0.46
CYTOR-203ENST00000409139 PLCD3Q8N3E9 789 aa12.14□□□□□ -0.47
CYTOR-203ENST00000409139 PLEKHG5O94827 1062 aa12.13□□□□□ -0.47
CYTOR-203ENST00000409139 ZNF579Q8NAF0 562 aaKnown RBP12.13□□□□□ -0.47
CYTOR-203ENST00000409139 PAK3O75914 559 aaPredicted RBP12.07□□□□□ -0.48
CYTOR-203ENST00000409139 CLCN6P51797 869 aa12.06□□□□□ -0.48
CYTOR-203ENST00000409139 DCBLD2Q96PD2 775 aa12.06□□□□□ -0.48
CYTOR-203ENST00000409139 PHF12Q96QT6 1004 aa12.04□□□□□ -0.48
CYTOR-203ENST00000409139 POTEMA6NI47 508 aa12.03□□□□□ -0.48
CYTOR-203ENST00000409139 VASPP50552 380 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms