RNA–Protein interactions for RNA: ENST00000408515.1

MIR548F4-201, Transcript of microRNA 548f-4, humanhuman

BASIC

Gene MIR548F4, Length 105 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548F4-201ENST00000408515 AEBP2Q6ZN18 517 aaPredicted RBP21.3■■□□□ 1
MIR548F4-201ENST00000408515 CHIC1Q5VXU3 224 aa19.97■□□□□ 0.79
MIR548F4-201ENST00000408515 SENP3Q9H4L4 574 aaPredicted RBP18.2■□□□□ 0.5
MIR548F4-201ENST00000408515 PHF23Q9BUL5 403 aaPredicted RBP17.94■□□□□ 0.46
MIR548F4-201ENST00000408515 FOXD1Q16676 465 aa17.01■□□□□ 0.31
MIR548F4-201ENST00000408515 POTEDQ86YR6 584 aa16.04■□□□□ 0.16
MIR548F4-201ENST00000408515 MSH5O43196 834 aa15.99■□□□□ 0.15
MIR548F4-201ENST00000408515 PIAS4Q8N2W9 510 aaPredicted RBP15.9■□□□□ 0.14
MIR548F4-201ENST00000408515 PLPPR3Q6T4P5 718 aa15.87■□□□□ 0.13
MIR548F4-201ENST00000408515 PPP6R1Q9UPN7 881 aa15.72■□□□□ 0.11
MIR548F4-201ENST00000408515 ADRA2BP18089 450 aa15.7■□□□□ 0.1
MIR548F4-201ENST00000408515 MAPK8IP2Q13387 824 aaPredicted RBP14.49□□□□□ -0.09
MIR548F4-201ENST00000408515 DMRT2Q9Y5R5 561 aa14.38□□□□□ -0.11
MIR548F4-201ENST00000408515 SCAF1Q9H7N4 1312 aaKnown RBP14.31□□□□□ -0.12
MIR548F4-201ENST00000408515 DCAF8L1A6NGE4 600 aa13.98□□□□□ -0.17
MIR548F4-201ENST00000408515 CACNB1Q02641 598 aaPredicted RBP13.94□□□□□ -0.18
MIR548F4-201ENST00000408515 PPP4R3CPQ6ZMV5 832 aa13.9□□□□□ -0.18
MIR548F4-201ENST00000408515 HOXD11P31277 338 aaPredicted RBP13.72□□□□□ -0.21
MIR548F4-201ENST00000408515 CNKSR2Q8WXI2 1034 aa13.66□□□□□ -0.22
MIR548F4-201ENST00000408515 RNF39Q9H2S5 420 aa13.61□□□□□ -0.23
MIR548F4-201ENST00000408515 RNF216Q9NWF9 866 aaPredicted RBP13.58□□□□□ -0.24
MIR548F4-201ENST00000408515 C1QBPQ07021 282 aaKnown RBP13.39□□□□□ -0.27
MIR548F4-201ENST00000408515 NCBP3Q53F19 620 aaKnown RBP13.28□□□□□ -0.28
MIR548F4-201ENST00000408515 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.2□□□□□ -0.3
MIR548F4-201ENST00000408515 DNAJC5BQ9UF47 199 aa13.2□□□□□ -0.3
MIR548F4-201ENST00000408515 NPM3O75607 178 aaKnown RBP13.11□□□□□ -0.31
MIR548F4-201ENST00000408515 U3KPZ7 1027 aaPredicted RBP12.84□□□□□ -0.35
MIR548F4-201ENST00000408515 CAPN15O75808 1086 aa12.8□□□□□ -0.36
MIR548F4-201ENST00000408515 SPINK5Q9NQ38 1064 aaPredicted RBP12.77□□□□□ -0.37
MIR548F4-201ENST00000408515 KCNA4P22459 653 aa12.68□□□□□ -0.38
MIR548F4-201ENST00000408515 DSG3P32926 999 aa12.68□□□□□ -0.38
MIR548F4-201ENST00000408515 SLC4A2P04920 1241 aa12.55□□□□□ -0.4
MIR548F4-201ENST00000408515 TRHP20396 242 aaPredicted RBP12.54□□□□□ -0.4
MIR548F4-201ENST00000408515 POTEHQ6S545 545 aa12.54□□□□□ -0.4
MIR548F4-201ENST00000408515 ABCB7O75027 752 aa12.5□□□□□ -0.41
MIR548F4-201ENST00000408515 APLP2Q06481 763 aa12.45□□□□□ -0.42
MIR548F4-201ENST00000408515 ZNF219Q9P2Y4 722 aaPredicted RBP12.43□□□□□ -0.42
MIR548F4-201ENST00000408515 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.37□□□□□ -0.43
MIR548F4-201ENST00000408515 HNRNPUL2Q1KMD3 747 aaKnown RBP12.37□□□□□ -0.43
MIR548F4-201ENST00000408515 SAMD1Q6SPF0 538 aaPredicted RBP12.3□□□□□ -0.44
MIR548F4-201ENST00000408515 MYCNP04198 464 aaPredicted RBP12.12□□□□□ -0.47
MIR548F4-201ENST00000408515 RBM42Q9BTD8 480 aaKnown RBP12.11□□□□□ -0.47
MIR548F4-201ENST00000408515 POLA2Q14181 598 aa12.1□□□□□ -0.47
MIR548F4-201ENST00000408515 CHRDL2Q6WN34 429 aa11.97□□□□□ -0.49
MIR548F4-201ENST00000408515 SLC4A1APQ9BWU0 796 aaKnown RBP11.93□□□□□ -0.5
MIR548F4-201ENST00000408515 ATF5Q9Y2D1 282 aaPredicted RBP11.89□□□□□ -0.51
MIR548F4-201ENST00000408515 FOXD4L1Q9NU39 408 aa11.87□□□□□ -0.51
MIR548F4-201ENST00000408515 ZBTB12Q9Y330 459 aaPredicted RBP11.8□□□□□ -0.52
MIR548F4-201ENST00000408515 OSCARQ8IYS5 282 aa11.77□□□□□ -0.53
MIR548F4-201ENST00000408515 AKT1S1Q96B36 256 aa11.76□□□□□ -0.53
MIR548F4-201ENST00000408515 REM2Q8IYK8 340 aaPredicted RBP11.69□□□□□ -0.54
MIR548F4-201ENST00000408515 ZBTB22O15209 634 aa11.64□□□□□ -0.55
MIR548F4-201ENST00000408515 PIP4P2Q8N4L2 257 aa11.63□□□□□ -0.55
MIR548F4-201ENST00000408515 SP7Q8TDD2 431 aaPredicted RBP11.63□□□□□ -0.55
MIR548F4-201ENST00000408515 PITPNM1O00562 1244 aa11.59□□□□□ -0.55
MIR548F4-201ENST00000408515 HAX1O00165 279 aa11.54□□□□□ -0.56
MIR548F4-201ENST00000408515 FXR2P51116 673 aaKnown RBP eCLIP11.47□□□□□ -0.57
MIR548F4-201ENST00000408515 ATXN8OSP0DMR3 200 aa11.45□□□□□ -0.58
MIR548F4-201ENST00000408515 FBLN2P98095 1184 aa11.45□□□□□ -0.58
MIR548F4-201ENST00000408515 SPDYE2BA6NHP3 402 aa11.4□□□□□ -0.58
MIR548F4-201ENST00000408515 SPDYE6P0CI01 402 aa11.4□□□□□ -0.58
MIR548F4-201ENST00000408515 SPDYE2Q495Y8 402 aa11.4□□□□□ -0.58
MIR548F4-201ENST00000408515 CLEC11AQ9Y240 323 aa11.37□□□□□ -0.59
MIR548F4-201ENST00000408515 EVX2Q03828 476 aa11.33□□□□□ -0.6
MIR548F4-201ENST00000408515 PRKAR2AP13861 404 aaKnown RBP11.31□□□□□ -0.6
MIR548F4-201ENST00000408515 MKRN4PQ13434 485 aaPredicted RBP11.3□□□□□ -0.6
MIR548F4-201ENST00000408515 ZNF692Q9BU19 519 aaPredicted RBP11.29□□□□□ -0.6
MIR548F4-201ENST00000408515 SPDYE1Q8NFV5 336 aaPredicted RBP11.28□□□□□ -0.6
MIR548F4-201ENST00000408515 SSUH2Q9Y2M2 353 aa11.2□□□□□ -0.62
MIR548F4-201ENST00000408515 CHADLQ6NUI6 762 aa11.17□□□□□ -0.62
MIR548F4-201ENST00000408515 PABPN1Q86U42 306 aaKnown RBP eCLIP11.12□□□□□ -0.63
MIR548F4-201ENST00000408515 C19orf67A6NJJ6 358 aa11.11□□□□□ -0.63
MIR548F4-201ENST00000408515 PRR29P0C7W0 189 aa11.09□□□□□ -0.63
MIR548F4-201ENST00000408515 GABBR2O75899 941 aa11.05□□□□□ -0.64
MIR548F4-201ENST00000408515 CD44P16070 742 aaKnown RBP10.94□□□□□ -0.66
MIR548F4-201ENST00000408515 LHX8Q68G74 356 aa10.91□□□□□ -0.66
MIR548F4-201ENST00000408515 FARP1Q9Y4F1 1045 aaPredicted RBP10.9□□□□□ -0.66
MIR548F4-201ENST00000408515 CSRNP3Q8WYN3 585 aa10.86□□□□□ -0.67
MIR548F4-201ENST00000408515 POTEIP0CG38 1075 aa10.79□□□□□ -0.68
MIR548F4-201ENST00000408515 DCBLD2Q96PD2 775 aa10.76□□□□□ -0.69
MIR548F4-201ENST00000408515 ZRANB1Q9UGI0 708 aa10.76□□□□□ -0.69
MIR548F4-201ENST00000408515 EHMT2Q96KQ7 1210 aa10.74□□□□□ -0.69
MIR548F4-201ENST00000408515 CREBZFQ9NS37 354 aa10.72□□□□□ -0.69
MIR548F4-201ENST00000408515 SPDYE4A6NLX3 237 aa10.69□□□□□ -0.7
MIR548F4-201ENST00000408515 ZNF579Q8NAF0 562 aaKnown RBP10.69□□□□□ -0.7
MIR548F4-201ENST00000408515 STAG3Q9UJ98 1225 aa10.69□□□□□ -0.7
MIR548F4-201ENST00000408515 CLCN6P51797 869 aa10.68□□□□□ -0.7
MIR548F4-201ENST00000408515 GALR2O43603 387 aaPredicted RBP10.64□□□□□ -0.71
MIR548F4-201ENST00000408515 PAK3O75914 559 aaPredicted RBP10.62□□□□□ -0.71
MIR548F4-201ENST00000408515 PHF12Q96QT6 1004 aa10.6□□□□□ -0.71
MIR548F4-201ENST00000408515 NPM1P06748 294 aaKnown RBP eCLIP10.53□□□□□ -0.72
MIR548F4-201ENST00000408515 PLSCR2Q9NRY7 297 aa10.53□□□□□ -0.72
MIR548F4-201ENST00000408515 MNX1P50219 401 aaPredicted RBP10.47□□□□□ -0.73
MIR548F4-201ENST00000408515 OTUD5Q96G74 571 aa10.46□□□□□ -0.73
MIR548F4-201ENST00000408515 POTEB2H3BUK9 544 aa10.45□□□□□ -0.74
MIR548F4-201ENST00000408515 PELP1Q8IZL8 1130 aaKnown RBP10.42□□□□□ -0.74
MIR548F4-201ENST00000408515 MS4A3Q96HJ5 214 aa10.42□□□□□ -0.74
MIR548F4-201ENST00000408515 TSPYL2Q9H2G4 693 aaPredicted RBP10.41□□□□□ -0.74
MIR548F4-201ENST00000408515 METRNQ9UJH8 293 aa10.38□□□□□ -0.75
MIR548F4-201ENST00000408515 ATMINO43313 823 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms