RNA–Protein interactions for RNA: ENST00000408031.1

GRAMD4-203, Transcript of GRAM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene GRAMD4, Length 2,834 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD4-203ENST00000408031 NISCHQ9Y2I1 1504 aa32.15■■■□□ 2.74
GRAMD4-203ENST00000408031 SHROOM4Q9ULL8 1493 aa27.74■■■□□ 2.03
GRAMD4-203ENST00000408031 CCDC180Q9P1Z9 1646 aa27.41■■□□□ 1.98
GRAMD4-203ENST00000408031 SUPT5HO00267 1087 aaKnown RBP27.37■■□□□ 1.97
GRAMD4-203ENST00000408031 DCAF8L2P0C7V8 631 aa27.15■■□□□ 1.94
GRAMD4-203ENST00000408031 ZCCHC6Q5VYS8 1495 aaKnown RBP27.09■■□□□ 1.93
GRAMD4-203ENST00000408031 CHIC1Q5VXU3 224 aa26.34■■□□□ 1.81
GRAMD4-203ENST00000408031 MYO15BQ96JP2 1530 aa26.27■■□□□ 1.8
GRAMD4-203ENST00000408031 DCAF1Q9Y4B6 1507 aa26.24■■□□□ 1.79
GRAMD4-203ENST00000408031 PCGF6Q9BYE7 350 aa26.16■■□□□ 1.78
GRAMD4-203ENST00000408031 ABCC9O60706 1549 aa26.01■■□□□ 1.75
GRAMD4-203ENST00000408031 HRCP23327 699 aa26■■□□□ 1.75
GRAMD4-203ENST00000408031 LOC105371045A0A1W2PR82 267 aa25.93■■□□□ 1.74
GRAMD4-203ENST00000408031 PELP1Q8IZL8 1130 aaKnown RBP25.89■■□□□ 1.74
GRAMD4-203ENST00000408031 PPARGC1BQ86YN6 1023 aaKnown RBP25.86■■□□□ 1.73
GRAMD4-203ENST00000408031 SCRIBQ14160 1630 aa25.85■■□□□ 1.73
GRAMD4-203ENST00000408031 EHMT2Q96KQ7 1210 aa25.53■■□□□ 1.68
GRAMD4-203ENST00000408031 NACADO15069 1562 aa25.48■■□□□ 1.67
GRAMD4-203ENST00000408031 FAM9AQ8IZU1 332 aaPredicted RBP25.42■■□□□ 1.66
GRAMD4-203ENST00000408031 MYT1Q01538 1121 aa25.38■■□□□ 1.65
GRAMD4-203ENST00000408031 RSF1Q96T23 1441 aaPredicted RBP25.34■■□□□ 1.65
GRAMD4-203ENST00000408031 TRIM26Q12899 539 aaPredicted RBP25.23■■□□□ 1.63
GRAMD4-203ENST00000408031 TRIM41Q8WV44 630 aa25.22■■□□□ 1.63
GRAMD4-203ENST00000408031 CECR2Q9BXF3 1484 aa25.21■■□□□ 1.63
GRAMD4-203ENST00000408031 RB1CC1Q8TDY2 1594 aa25.2■■□□□ 1.62
GRAMD4-203ENST00000408031 MROH2BQ7Z745 1585 aa25.04■■□□□ 1.6
GRAMD4-203ENST00000408031 WIZO95785 1651 aa24.89■■□□□ 1.58
GRAMD4-203ENST00000408031 PABPN1Q86U42 306 aaKnown RBP eCLIP24.88■■□□□ 1.57
GRAMD4-203ENST00000408031 UNC13AQ9UPW8 1703 aa24.78■■□□□ 1.56
GRAMD4-203ENST00000408031 BAZ1AQ9NRL2 1556 aaPredicted RBP24.72■■□□□ 1.55
GRAMD4-203ENST00000408031 TTBK1Q5TCY1 1321 aaPredicted RBP24.7■■□□□ 1.55
GRAMD4-203ENST00000408031 ZEB1P37275 1124 aaPredicted RBP24.63■■□□□ 1.53
GRAMD4-203ENST00000408031 SMARCA4P51532 1647 aa24.57■■□□□ 1.52
GRAMD4-203ENST00000408031 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.53■■□□□ 1.52
GRAMD4-203ENST00000408031 BICRAQ9NZM4 1560 aa24.51■■□□□ 1.51
GRAMD4-203ENST00000408031 TOP2AP11388 1531 aaKnown RBP24.43■■□□□ 1.5
GRAMD4-203ENST00000408031 CCER1Q8TC90 406 aaPredicted RBP24.41■■□□□ 1.5
GRAMD4-203ENST00000408031 CCDC88BA6NC98 1476 aa24.38■■□□□ 1.49
GRAMD4-203ENST00000408031 SMARCA2P51531 1590 aa24.3■■□□□ 1.48
GRAMD4-203ENST00000408031 SCAF1Q9H7N4 1312 aaKnown RBP24.29■■□□□ 1.48
GRAMD4-203ENST00000408031 ABCC8Q09428 1581 aa24.26■■□□□ 1.47
GRAMD4-203ENST00000408031 EIF4G1Q04637 1599 aaKnown RBP24.25■■□□□ 1.47
GRAMD4-203ENST00000408031 UBTFP17480 764 aaKnown RBP24.12■■□□□ 1.45
GRAMD4-203ENST00000408031 ATAD2BQ9ULI0 1458 aa24.06■■□□□ 1.44
GRAMD4-203ENST00000408031 BAZ1BQ9UIG0 1483 aaKnown RBP24.02■■□□□ 1.44
GRAMD4-203ENST00000408031 PEG3Q9GZU2 1588 aa24■■□□□ 1.43
GRAMD4-203ENST00000408031 RANGAP1P46060 587 aaPredicted RBP24■■□□□ 1.43
GRAMD4-203ENST00000408031 SOGA1O94964 1423 aa23.99■■□□□ 1.43
GRAMD4-203ENST00000408031 DIEXFQ68CQ4 756 aaKnown RBP23.98■■□□□ 1.43
GRAMD4-203ENST00000408031 NEUROD1Q13562 356 aa23.96■■□□□ 1.43
GRAMD4-203ENST00000408031 CEP162Q5TB80 1403 aa23.9■■□□□ 1.42
GRAMD4-203ENST00000408031 CSRNP3Q8WYN3 585 aa23.88■■□□□ 1.41
GRAMD4-203ENST00000408031 RUSC2Q8N2Y8 1516 aa23.88■■□□□ 1.41
GRAMD4-203ENST00000408031 ACIN1Q9UKV3 1341 aaKnown RBP23.86■■□□□ 1.41
GRAMD4-203ENST00000408031 WRNQ14191 1432 aaPredicted RBP eCLIP23.85■■□□□ 1.41
GRAMD4-203ENST00000408031 HNRNPUL2Q1KMD3 747 aaKnown RBP23.85■■□□□ 1.41
GRAMD4-203ENST00000408031 YTHDC1Q96MU7 727 aaKnown RBP23.81■■□□□ 1.4
GRAMD4-203ENST00000408031 GTF3C3Q9Y5Q9 886 aa23.79■■□□□ 1.4
GRAMD4-203ENST00000408031 PRKCSHP14314 528 aaPredicted RBP23.74■■□□□ 1.39
GRAMD4-203ENST00000408031 SYNJ1O43426 1573 aa23.73■■□□□ 1.39
GRAMD4-203ENST00000408031 TNIKQ9UKE5 1360 aa23.69■■□□□ 1.38
GRAMD4-203ENST00000408031 CENPBP07199 599 aaPredicted RBP23.68■■□□□ 1.38
GRAMD4-203ENST00000408031 EEA1Q15075 1411 aa23.61■■□□□ 1.37
GRAMD4-203ENST00000408031 NCAPD3P42695 1498 aa23.61■■□□□ 1.37
GRAMD4-203ENST00000408031 ZNF316A6NFI3 1004 aaPredicted RBP23.6■■□□□ 1.37
GRAMD4-203ENST00000408031 APLP2Q06481 763 aa23.56■■□□□ 1.36
GRAMD4-203ENST00000408031 HMGXB3Q12766 1538 aa23.53■■□□□ 1.36
GRAMD4-203ENST00000408031 GOLGA3Q08378 1498 aa23.52■■□□□ 1.36
GRAMD4-203ENST00000408031 MIER1Q8N108 512 aa23.48■■□□□ 1.35
GRAMD4-203ENST00000408031 BCL11AQ9H165 835 aa23.44■■□□□ 1.34
GRAMD4-203ENST00000408031 CLIP1P30622 1438 aa23.42■■□□□ 1.34
GRAMD4-203ENST00000408031 CEP164Q9UPV0 1460 aa23.41■■□□□ 1.34
GRAMD4-203ENST00000408031 TOP2BQ02880 1626 aa23.4■■□□□ 1.34
GRAMD4-203ENST00000408031 RAPGEF2Q9Y4G8 1499 aa23.36■■□□□ 1.33
GRAMD4-203ENST00000408031 CFTRP13569 1480 aa23.33■■□□□ 1.33
GRAMD4-203ENST00000408031 CUX1P39880 1505 aa23.32■■□□□ 1.32
GRAMD4-203ENST00000408031 KIF21BO75037 1637 aa23.3■■□□□ 1.32
GRAMD4-203ENST00000408031 CC2D2AQ9P2K1 1620 aa23.3■■□□□ 1.32
GRAMD4-203ENST00000408031 BIVM-ERCC5R4GMW8 1640 aa23.28■■□□□ 1.32
GRAMD4-203ENST00000408031 ITGAEP38570 1179 aa23.27■■□□□ 1.32
GRAMD4-203ENST00000408031 VPS8Q8N3P4 1428 aa23.21■■□□□ 1.31
GRAMD4-203ENST00000408031 ERICH6Q7L0X2 663 aa23.2■■□□□ 1.3
GRAMD4-203ENST00000408031 CADPSQ9ULU8 1353 aa23.2■■□□□ 1.3
GRAMD4-203ENST00000408031 KANK4Q5T7N3 995 aaPredicted RBP23.17■■□□□ 1.3
GRAMD4-203ENST00000408031 KIF27Q86VH2 1401 aa23.14■■□□□ 1.29
GRAMD4-203ENST00000408031 PRXQ9BXM0 1461 aa23.08■■□□□ 1.29
GRAMD4-203ENST00000408031 CUX2O14529 1486 aa23.06■■□□□ 1.28
GRAMD4-203ENST00000408031 NESP48681 1621 aa23.03■■□□□ 1.28
GRAMD4-203ENST00000408031 PRDM2Q13029 1718 aa23.01■■□□□ 1.27
GRAMD4-203ENST00000408031 FGD5Q6ZNL6 1462 aa23.01■■□□□ 1.27
GRAMD4-203ENST00000408031 FANCD2Q9BXW9 1451 aa23■■□□□ 1.27
GRAMD4-203ENST00000408031 DNAJC5BQ9UF47 199 aa23■■□□□ 1.27
GRAMD4-203ENST00000408031 ERICH3Q5RHP9 1530 aa22.99■■□□□ 1.27
GRAMD4-203ENST00000408031 ATP1B4Q9UN42 357 aaPredicted RBP22.95■■□□□ 1.26
GRAMD4-203ENST00000408031 DHX57Q6P158 1386 aaKnown RBP22.94■■□□□ 1.26
GRAMD4-203ENST00000408031 IGF1RP08069 1367 aa22.92■■□□□ 1.26
GRAMD4-203ENST00000408031 ARAP1Q96P48 1450 aa22.91■■□□□ 1.26
GRAMD4-203ENST00000408031 RAD54L2Q9Y4B4 1467 aa22.88■■□□□ 1.25
GRAMD4-203ENST00000408031 P3H3Q8IVL6 736 aa22.86■■□□□ 1.25
GRAMD4-203ENST00000408031 CARMIL1Q5VZK9 1371 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms