RNA–Protein interactions for RNA: ENST00000407441.4

ACSL3-203, Transcript of acyl-CoA synthetase long chain family member 3, humanhuman

TSL 3

Gene ACSL3, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL3-203ENST00000407441 AEBP2Q6ZN18 517 aaPredicted RBP24.18■■□□□ 1.46
ACSL3-203ENST00000407441 CHIC1Q5VXU3 224 aa23.67■■□□□ 1.38
ACSL3-203ENST00000407441 PHF23Q9BUL5 403 aaPredicted RBP20.84■□□□□ 0.93
ACSL3-203ENST00000407441 SENP3Q9H4L4 574 aaPredicted RBP20.47■□□□□ 0.87
ACSL3-203ENST00000407441 PLPPR3Q6T4P5 718 aa19.22■□□□□ 0.67
ACSL3-203ENST00000407441 FOXD1Q16676 465 aa19.01■□□□□ 0.63
ACSL3-203ENST00000407441 PPP6R1Q9UPN7 881 aa18.36■□□□□ 0.53
ACSL3-203ENST00000407441 ADRA2BP18089 450 aa18.3■□□□□ 0.52
ACSL3-203ENST00000407441 PIAS4Q8N2W9 510 aaPredicted RBP17.88■□□□□ 0.45
ACSL3-203ENST00000407441 MSH5O43196 834 aa17.48■□□□□ 0.39
ACSL3-203ENST00000407441 PPP4R3CPQ6ZMV5 832 aa16.94■□□□□ 0.3
ACSL3-203ENST00000407441 SCAF1Q9H7N4 1312 aaKnown RBP16.73■□□□□ 0.27
ACSL3-203ENST00000407441 KCNA4P22459 653 aa16.62■□□□□ 0.25
ACSL3-203ENST00000407441 MAPK8IP2Q13387 824 aaPredicted RBP16.59■□□□□ 0.25
ACSL3-203ENST00000407441 NCBP3Q53F19 620 aaKnown RBP16.49■□□□□ 0.23
ACSL3-203ENST00000407441 CNKSR2Q8WXI2 1034 aa16.46■□□□□ 0.23
ACSL3-203ENST00000407441 DMRT2Q9Y5R5 561 aa16.37■□□□□ 0.21
ACSL3-203ENST00000407441 NPM3O75607 178 aaKnown RBP16.29■□□□□ 0.2
ACSL3-203ENST00000407441 RNF216Q9NWF9 866 aaPredicted RBP16.15■□□□□ 0.18
ACSL3-203ENST00000407441 HOXD11P31277 338 aaPredicted RBP16.09■□□□□ 0.17
ACSL3-203ENST00000407441 DNAJC5BQ9UF47 199 aa15.94■□□□□ 0.14
ACSL3-203ENST00000407441 SLC4A1APQ9BWU0 796 aaKnown RBP15.81■□□□□ 0.12
ACSL3-203ENST00000407441 POTEDQ86YR6 584 aa15.8■□□□□ 0.12
ACSL3-203ENST00000407441 DCAF8L1A6NGE4 600 aa15.52■□□□□ 0.08
ACSL3-203ENST00000407441 SLC4A2P04920 1241 aa15.39■□□□□ 0.05
ACSL3-203ENST00000407441 EHMT2Q96KQ7 1210 aa15.39■□□□□ 0.05
ACSL3-203ENST00000407441 ZBTB22O15209 634 aa15.34■□□□□ 0.05
ACSL3-203ENST00000407441 CSRNP3Q8WYN3 585 aa15.28■□□□□ 0.04
ACSL3-203ENST00000407441 FOXD4L1Q9NU39 408 aa15.28■□□□□ 0.04
ACSL3-203ENST00000407441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.22■□□□□ 0.03
ACSL3-203ENST00000407441 U3KPZ7 1027 aaPredicted RBP15.06■□□□□ 0
ACSL3-203ENST00000407441 MYCNP04198 464 aaPredicted RBP15.03■□□□□ -0
ACSL3-203ENST00000407441 RNF39Q9H2S5 420 aa15.02■□□□□ -0
ACSL3-203ENST00000407441 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.86□□□□□ -0.03
ACSL3-203ENST00000407441 HNRNPUL2Q1KMD3 747 aaKnown RBP14.86□□□□□ -0.03
ACSL3-203ENST00000407441 C1QBPQ07021 282 aaKnown RBP14.83□□□□□ -0.04
ACSL3-203ENST00000407441 SAMD1Q6SPF0 538 aaPredicted RBP14.82□□□□□ -0.04
ACSL3-203ENST00000407441 ATXN8OSP0DMR3 200 aa14.78□□□□□ -0.04
ACSL3-203ENST00000407441 APLP2Q06481 763 aa14.66□□□□□ -0.06
ACSL3-203ENST00000407441 ATF5Q9Y2D1 282 aaPredicted RBP14.64□□□□□ -0.07
ACSL3-203ENST00000407441 SPINK5Q9NQ38 1064 aaPredicted RBP14.59□□□□□ -0.07
ACSL3-203ENST00000407441 CACNB1Q02641 598 aaPredicted RBP14.49□□□□□ -0.09
ACSL3-203ENST00000407441 CAPN15O75808 1086 aa14.47□□□□□ -0.09
ACSL3-203ENST00000407441 ZNF219Q9P2Y4 722 aaPredicted RBP14.47□□□□□ -0.09
ACSL3-203ENST00000407441 TRHP20396 242 aaPredicted RBP14.42□□□□□ -0.1
ACSL3-203ENST00000407441 DSG3P32926 999 aa14.3□□□□□ -0.12
ACSL3-203ENST00000407441 POLA2Q14181 598 aa14.24□□□□□ -0.13
ACSL3-203ENST00000407441 ABCB7O75027 752 aa14.2□□□□□ -0.14
ACSL3-203ENST00000407441 MKRN4PQ13434 485 aaPredicted RBP14.03□□□□□ -0.16
ACSL3-203ENST00000407441 ZBTB12Q9Y330 459 aaPredicted RBP14.03□□□□□ -0.16
ACSL3-203ENST00000407441 FBLN2P98095 1184 aa13.96□□□□□ -0.17
ACSL3-203ENST00000407441 FKBP8Q14318 412 aa13.75□□□□□ -0.21
ACSL3-203ENST00000407441 OSCARQ8IYS5 282 aa13.75□□□□□ -0.21
ACSL3-203ENST00000407441 SPDYE4A6NLX3 237 aa13.69□□□□□ -0.22
ACSL3-203ENST00000407441 SPDYE2BA6NHP3 402 aa13.67□□□□□ -0.22
ACSL3-203ENST00000407441 SPDYE6P0CI01 402 aa13.67□□□□□ -0.22
ACSL3-203ENST00000407441 SPDYE2Q495Y8 402 aa13.67□□□□□ -0.22
ACSL3-203ENST00000407441 SSUH2Q9Y2M2 353 aa13.61□□□□□ -0.23
ACSL3-203ENST00000407441 PROM2Q8N271 834 aa13.59□□□□□ -0.23
ACSL3-203ENST00000407441 RBM42Q9BTD8 480 aaKnown RBP13.59□□□□□ -0.23
ACSL3-203ENST00000407441 ZNF692Q9BU19 519 aaPredicted RBP13.58□□□□□ -0.24
ACSL3-203ENST00000407441 AKT1S1Q96B36 256 aa13.46□□□□□ -0.25
ACSL3-203ENST00000407441 PABPN1Q86U42 306 aaKnown RBP eCLIP13.42□□□□□ -0.26
ACSL3-203ENST00000407441 REM2Q8IYK8 340 aaPredicted RBP13.33□□□□□ -0.28
ACSL3-203ENST00000407441 FBXO3Q9UK99 471 aa13.26□□□□□ -0.29
ACSL3-203ENST00000407441 SPDYE1Q8NFV5 336 aaPredicted RBP13.22□□□□□ -0.29
ACSL3-203ENST00000407441 STAG3Q9UJ98 1225 aa13.22□□□□□ -0.29
ACSL3-203ENST00000407441 PITPNM1O00562 1244 aa13.16□□□□□ -0.3
ACSL3-203ENST00000407441 VASPP50552 380 aaPredicted RBP13.1□□□□□ -0.31
ACSL3-203ENST00000407441 CLEC11AQ9Y240 323 aa13.1□□□□□ -0.31
ACSL3-203ENST00000407441 PRR29P0C7W0 189 aa13.03□□□□□ -0.32
ACSL3-203ENST00000407441 CHRDL2Q6WN34 429 aa13□□□□□ -0.33
ACSL3-203ENST00000407441 FXR2P51116 673 aaKnown RBP eCLIP12.94□□□□□ -0.34
ACSL3-203ENST00000407441 IFNLR1Q8IU57 520 aaPredicted RBP12.94□□□□□ -0.34
ACSL3-203ENST00000407441 MIER1Q8N108 512 aa12.94□□□□□ -0.34
ACSL3-203ENST00000407441 CREBZFQ9NS37 354 aa12.93□□□□□ -0.34
ACSL3-203ENST00000407441 PLCD3Q8N3E9 789 aa12.92□□□□□ -0.34
ACSL3-203ENST00000407441 PIP4P2Q8N4L2 257 aa12.86□□□□□ -0.35
ACSL3-203ENST00000407441 MNX1P50219 401 aaPredicted RBP12.85□□□□□ -0.35
ACSL3-203ENST00000407441 PLEKHG5O94827 1062 aa12.84□□□□□ -0.35
ACSL3-203ENST00000407441 PRKAR2AP13861 404 aaKnown RBP12.81□□□□□ -0.36
ACSL3-203ENST00000407441 CHADLQ6NUI6 762 aa12.81□□□□□ -0.36
ACSL3-203ENST00000407441 ZBTB47Q9UFB7 747 aaPredicted RBP12.8□□□□□ -0.36
ACSL3-203ENST00000407441 KLHL34Q8N239 644 aa12.77□□□□□ -0.37
ACSL3-203ENST00000407441 SPOCK2Q92563 424 aa12.74□□□□□ -0.37
ACSL3-203ENST00000407441 FARP1Q9Y4F1 1045 aaPredicted RBP12.74□□□□□ -0.37
ACSL3-203ENST00000407441 NUBP1P53384 320 aa12.69□□□□□ -0.38
ACSL3-203ENST00000407441 NPM1P06748 294 aaKnown RBP eCLIP12.67□□□□□ -0.38
ACSL3-203ENST00000407441 AMER1Q5JTC6 1135 aaPredicted RBP12.66□□□□□ -0.38
ACSL3-203ENST00000407441 RTN4Q9NQC3 1192 aaKnown RBP12.64□□□□□ -0.39
ACSL3-203ENST00000407441 RASEFQ8IZ41 740 aa12.59□□□□□ -0.39
ACSL3-203ENST00000407441 PKD2Q13563 968 aa12.55□□□□□ -0.4
ACSL3-203ENST00000407441 FAM212AQ96EL1 285 aa12.52□□□□□ -0.41
ACSL3-203ENST00000407441 GSE1Q14687 1217 aa12.51□□□□□ -0.41
ACSL3-203ENST00000407441 POTEHQ6S545 545 aa12.51□□□□□ -0.41
ACSL3-203ENST00000407441 C19orf67A6NJJ6 358 aa12.49□□□□□ -0.41
ACSL3-203ENST00000407441 DCAF8Q5TAQ9 597 aa12.47□□□□□ -0.41
ACSL3-203ENST00000407441 CIZ1Q9ULV3 898 aaPredicted RBP12.47□□□□□ -0.41
ACSL3-203ENST00000407441 CD44P16070 742 aaKnown RBP12.44□□□□□ -0.42
ACSL3-203ENST00000407441 TSPYL2Q9H2G4 693 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms