RNA–Protein interactions for RNA: ENST00000406229.2

NCSTNP1-201, Transcript of nicastrin pseudogene 1, humanhuman

BASIC

Gene NCSTNP1, Length 144 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTNP1-201ENST00000406229 AEBP2Q6ZN18 517 aaPredicted RBP21.87■■□□□ 1.09
NCSTNP1-201ENST00000406229 CHIC1Q5VXU3 224 aa21.31■■□□□ 1
NCSTNP1-201ENST00000406229 PHF23Q9BUL5 403 aaPredicted RBP18.77■□□□□ 0.6
NCSTNP1-201ENST00000406229 SENP3Q9H4L4 574 aaPredicted RBP18.49■□□□□ 0.55
NCSTNP1-201ENST00000406229 PLPPR3Q6T4P5 718 aa17.25■□□□□ 0.35
NCSTNP1-201ENST00000406229 FOXD1Q16676 465 aa17.21■□□□□ 0.35
NCSTNP1-201ENST00000406229 PPP6R1Q9UPN7 881 aa16.57■□□□□ 0.24
NCSTNP1-201ENST00000406229 ADRA2BP18089 450 aa16.51■□□□□ 0.23
NCSTNP1-201ENST00000406229 PIAS4Q8N2W9 510 aaPredicted RBP16.14■□□□□ 0.17
NCSTNP1-201ENST00000406229 MSH5O43196 834 aa15.82■□□□□ 0.12
NCSTNP1-201ENST00000406229 POTEDQ86YR6 584 aa15.41■□□□□ 0.06
NCSTNP1-201ENST00000406229 PPP4R3CPQ6ZMV5 832 aa15.21■□□□□ 0.03
NCSTNP1-201ENST00000406229 SCAF1Q9H7N4 1312 aaKnown RBP15.06■□□□□ 0
NCSTNP1-201ENST00000406229 MAPK8IP2Q13387 824 aaPredicted RBP15□□□□□ -0.01
NCSTNP1-201ENST00000406229 KCNA4P22459 653 aa14.84□□□□□ -0.03
NCSTNP1-201ENST00000406229 DMRT2Q9Y5R5 561 aa14.79□□□□□ -0.04
NCSTNP1-201ENST00000406229 CNKSR2Q8WXI2 1034 aa14.78□□□□□ -0.04
NCSTNP1-201ENST00000406229 NCBP3Q53F19 620 aaKnown RBP14.76□□□□□ -0.05
NCSTNP1-201ENST00000406229 NPM3O75607 178 aaKnown RBP14.6□□□□□ -0.07
NCSTNP1-201ENST00000406229 RNF216Q9NWF9 866 aaPredicted RBP14.52□□□□□ -0.09
NCSTNP1-201ENST00000406229 HOXD11P31277 338 aaPredicted RBP14.5□□□□□ -0.09
NCSTNP1-201ENST00000406229 DNAJC5BQ9UF47 199 aa14.28□□□□□ -0.12
NCSTNP1-201ENST00000406229 SLC4A1APQ9BWU0 796 aaKnown RBP14.08□□□□□ -0.16
NCSTNP1-201ENST00000406229 DCAF8L1A6NGE4 600 aa14.02□□□□□ -0.17
NCSTNP1-201ENST00000406229 SLC4A2P04920 1241 aa13.83□□□□□ -0.2
NCSTNP1-201ENST00000406229 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.72□□□□□ -0.21
NCSTNP1-201ENST00000406229 ZBTB22O15209 634 aa13.68□□□□□ -0.22
NCSTNP1-201ENST00000406229 FOXD4L1Q9NU39 408 aa13.63□□□□□ -0.23
NCSTNP1-201ENST00000406229 EHMT2Q96KQ7 1210 aa13.6□□□□□ -0.23
NCSTNP1-201ENST00000406229 RNF39Q9H2S5 420 aa13.6□□□□□ -0.23
NCSTNP1-201ENST00000406229 CSRNP3Q8WYN3 585 aa13.58□□□□□ -0.24
NCSTNP1-201ENST00000406229 U3KPZ7 1027 aaPredicted RBP13.56□□□□□ -0.24
NCSTNP1-201ENST00000406229 MYCNP04198 464 aaPredicted RBP13.45□□□□□ -0.26
NCSTNP1-201ENST00000406229 C1QBPQ07021 282 aaKnown RBP13.42□□□□□ -0.26
NCSTNP1-201ENST00000406229 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.32□□□□□ -0.28
NCSTNP1-201ENST00000406229 HNRNPUL2Q1KMD3 747 aaKnown RBP13.32□□□□□ -0.28
NCSTNP1-201ENST00000406229 SAMD1Q6SPF0 538 aaPredicted RBP13.29□□□□□ -0.28
NCSTNP1-201ENST00000406229 ATXN8OSP0DMR3 200 aa13.2□□□□□ -0.3
NCSTNP1-201ENST00000406229 CACNB1Q02641 598 aaPredicted RBP13.19□□□□□ -0.3
NCSTNP1-201ENST00000406229 SPINK5Q9NQ38 1064 aaPredicted RBP13.18□□□□□ -0.3
NCSTNP1-201ENST00000406229 APLP2Q06481 763 aa13.16□□□□□ -0.3
NCSTNP1-201ENST00000406229 ATF5Q9Y2D1 282 aaPredicted RBP13.15□□□□□ -0.3
NCSTNP1-201ENST00000406229 CAPN15O75808 1086 aa13.06□□□□□ -0.32
NCSTNP1-201ENST00000406229 ZNF219Q9P2Y4 722 aaPredicted RBP13.01□□□□□ -0.33
NCSTNP1-201ENST00000406229 TRHP20396 242 aaPredicted RBP13□□□□□ -0.33
NCSTNP1-201ENST00000406229 DSG3P32926 999 aa12.93□□□□□ -0.34
NCSTNP1-201ENST00000406229 POLA2Q14181 598 aa12.83□□□□□ -0.36
NCSTNP1-201ENST00000406229 ABCB7O75027 752 aa12.82□□□□□ -0.36
NCSTNP1-201ENST00000406229 MKRN4PQ13434 485 aaPredicted RBP12.59□□□□□ -0.39
NCSTNP1-201ENST00000406229 ZBTB12Q9Y330 459 aaPredicted RBP12.58□□□□□ -0.4
NCSTNP1-201ENST00000406229 FBLN2P98095 1184 aa12.51□□□□□ -0.41
NCSTNP1-201ENST00000406229 OSCARQ8IYS5 282 aa12.36□□□□□ -0.43
NCSTNP1-201ENST00000406229 SPDYE2BA6NHP3 402 aa12.27□□□□□ -0.45
NCSTNP1-201ENST00000406229 SPDYE6P0CI01 402 aa12.27□□□□□ -0.45
NCSTNP1-201ENST00000406229 SPDYE2Q495Y8 402 aa12.27□□□□□ -0.45
NCSTNP1-201ENST00000406229 RBM42Q9BTD8 480 aaKnown RBP12.26□□□□□ -0.45
NCSTNP1-201ENST00000406229 SPDYE4A6NLX3 237 aa12.22□□□□□ -0.45
NCSTNP1-201ENST00000406229 SSUH2Q9Y2M2 353 aa12.21□□□□□ -0.45
NCSTNP1-201ENST00000406229 FKBP8Q14318 412 aa12.19□□□□□ -0.46
NCSTNP1-201ENST00000406229 ZNF692Q9BU19 519 aaPredicted RBP12.19□□□□□ -0.46
NCSTNP1-201ENST00000406229 AKT1S1Q96B36 256 aa12.14□□□□□ -0.47
NCSTNP1-201ENST00000406229 PROM2Q8N271 834 aa12.12□□□□□ -0.47
NCSTNP1-201ENST00000406229 PABPN1Q86U42 306 aaKnown RBP eCLIP12.04□□□□□ -0.48
NCSTNP1-201ENST00000406229 REM2Q8IYK8 340 aaPredicted RBP12.04□□□□□ -0.48
NCSTNP1-201ENST00000406229 POTEHQ6S545 545 aa11.91□□□□□ -0.5
NCSTNP1-201ENST00000406229 SPDYE1Q8NFV5 336 aaPredicted RBP11.89□□□□□ -0.51
NCSTNP1-201ENST00000406229 PITPNM1O00562 1244 aa11.88□□□□□ -0.51
NCSTNP1-201ENST00000406229 STAG3Q9UJ98 1225 aa11.83□□□□□ -0.52
NCSTNP1-201ENST00000406229 CLEC11AQ9Y240 323 aa11.8□□□□□ -0.52
NCSTNP1-201ENST00000406229 CHRDL2Q6WN34 429 aa11.78□□□□□ -0.52
NCSTNP1-201ENST00000406229 FBXO3Q9UK99 471 aa11.77□□□□□ -0.53
NCSTNP1-201ENST00000406229 PRR29P0C7W0 189 aa11.72□□□□□ -0.53
NCSTNP1-201ENST00000406229 FXR2P51116 673 aaKnown RBP eCLIP11.71□□□□□ -0.53
NCSTNP1-201ENST00000406229 PIP4P2Q8N4L2 257 aa11.65□□□□□ -0.54
NCSTNP1-201ENST00000406229 VASPP50552 380 aaPredicted RBP11.63□□□□□ -0.55
NCSTNP1-201ENST00000406229 CREBZFQ9NS37 354 aa11.63□□□□□ -0.55
NCSTNP1-201ENST00000406229 MIER1Q8N108 512 aa11.57□□□□□ -0.56
NCSTNP1-201ENST00000406229 PRKAR2AP13861 404 aaKnown RBP11.56□□□□□ -0.56
NCSTNP1-201ENST00000406229 CHADLQ6NUI6 762 aa11.56□□□□□ -0.56
NCSTNP1-201ENST00000406229 MNX1P50219 401 aaPredicted RBP11.55□□□□□ -0.56
NCSTNP1-201ENST00000406229 PLCD3Q8N3E9 789 aa11.52□□□□□ -0.57
NCSTNP1-201ENST00000406229 IFNLR1Q8IU57 520 aaPredicted RBP11.51□□□□□ -0.57
NCSTNP1-201ENST00000406229 FARP1Q9Y4F1 1045 aaPredicted RBP11.47□□□□□ -0.57
NCSTNP1-201ENST00000406229 PLEKHG5O94827 1062 aa11.45□□□□□ -0.58
NCSTNP1-201ENST00000406229 ZBTB47Q9UFB7 747 aaPredicted RBP11.41□□□□□ -0.58
NCSTNP1-201ENST00000406229 KLHL34Q8N239 644 aa11.38□□□□□ -0.59
NCSTNP1-201ENST00000406229 NPM1P06748 294 aaKnown RBP eCLIP11.36□□□□□ -0.59
NCSTNP1-201ENST00000406229 NUBP1P53384 320 aa11.36□□□□□ -0.59
NCSTNP1-201ENST00000406229 SPOCK2Q92563 424 aa11.33□□□□□ -0.6
NCSTNP1-201ENST00000406229 C19orf67A6NJJ6 358 aa11.3□□□□□ -0.6
NCSTNP1-201ENST00000406229 RASEFQ8IZ41 740 aa11.29□□□□□ -0.6
NCSTNP1-201ENST00000406229 HAX1O00165 279 aa11.23□□□□□ -0.61
NCSTNP1-201ENST00000406229 EVX2Q03828 476 aa11.23□□□□□ -0.61
NCSTNP1-201ENST00000406229 CD44P16070 742 aaKnown RBP11.22□□□□□ -0.61
NCSTNP1-201ENST00000406229 FAM212AQ96EL1 285 aa11.17□□□□□ -0.62
NCSTNP1-201ENST00000406229 TSPYL2Q9H2G4 693 aaPredicted RBP11.17□□□□□ -0.62
NCSTNP1-201ENST00000406229 GSE1Q14687 1217 aa11.16□□□□□ -0.62
NCSTNP1-201ENST00000406229 DCAF8Q5TAQ9 597 aa11.16□□□□□ -0.62
NCSTNP1-201ENST00000406229 CCDC61Q9Y6R9 512 aa11.16□□□□□ -0.62
NCSTNP1-201ENST00000406229 ZRANB1Q9UGI0 708 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms