RNA–Protein interactions for RNA: ENST00000405219.7

XBP1-204, Transcript of X-box binding protein 1, humanhuman

TSL 2 BASIC

Gene XBP1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XBP1-204ENST00000405219 NISCHQ9Y2I1 1504 aa29.12■■■□□ 2.25
XBP1-204ENST00000405219 CCDC180Q9P1Z9 1646 aa25.16■■□□□ 1.62
XBP1-204ENST00000405219 ZCCHC6Q5VYS8 1495 aaKnown RBP24.58■■□□□ 1.52
XBP1-204ENST00000405219 SHROOM4Q9ULL8 1493 aa24.27■■□□□ 1.48
XBP1-204ENST00000405219 DCAF1Q9Y4B6 1507 aa24.06■■□□□ 1.44
XBP1-204ENST00000405219 DCAF8L2P0C7V8 631 aa23.95■■□□□ 1.43
XBP1-204ENST00000405219 SUPT5HO00267 1087 aaKnown RBP23.67■■□□□ 1.38
XBP1-204ENST00000405219 MYO15BQ96JP2 1530 aa23.52■■□□□ 1.36
XBP1-204ENST00000405219 NACADO15069 1562 aa23.26■■□□□ 1.31
XBP1-204ENST00000405219 SCRIBQ14160 1630 aa23.25■■□□□ 1.31
XBP1-204ENST00000405219 ABCC9O60706 1549 aa23.22■■□□□ 1.31
XBP1-204ENST00000405219 RB1CC1Q8TDY2 1594 aa22.94■■□□□ 1.26
XBP1-204ENST00000405219 CHIC1Q5VXU3 224 aa22.93■■□□□ 1.26
XBP1-204ENST00000405219 RSF1Q96T23 1441 aaPredicted RBP22.81■■□□□ 1.24
XBP1-204ENST00000405219 CECR2Q9BXF3 1484 aa22.56■■□□□ 1.2
XBP1-204ENST00000405219 UNC13AQ9UPW8 1703 aa22.54■■□□□ 1.2
XBP1-204ENST00000405219 MROH2BQ7Z745 1585 aa22.52■■□□□ 1.2
XBP1-204ENST00000405219 BAZ1AQ9NRL2 1556 aaPredicted RBP22.47■■□□□ 1.19
XBP1-204ENST00000405219 WIZO95785 1651 aa22.43■■□□□ 1.18
XBP1-204ENST00000405219 SMARCA4P51532 1647 aa22.3■■□□□ 1.16
XBP1-204ENST00000405219 TRIM41Q8WV44 630 aa22.21■■□□□ 1.15
XBP1-204ENST00000405219 TOP2AP11388 1531 aaKnown RBP22.19■■□□□ 1.14
XBP1-204ENST00000405219 BICRAQ9NZM4 1560 aa22.17■■□□□ 1.14
XBP1-204ENST00000405219 LOC105371045A0A1W2PR82 267 aa22.1■■□□□ 1.13
XBP1-204ENST00000405219 EIF4G1Q04637 1599 aaKnown RBP22.04■■□□□ 1.12
XBP1-204ENST00000405219 PABPN1Q86U42 306 aaKnown RBP eCLIP22.01■■□□□ 1.11
XBP1-204ENST00000405219 SMARCA2P51531 1590 aa21.99■■□□□ 1.11
XBP1-204ENST00000405219 CCDC88BA6NC98 1476 aa21.96■■□□□ 1.11
XBP1-204ENST00000405219 PEG3Q9GZU2 1588 aa21.94■■□□□ 1.1
XBP1-204ENST00000405219 FAM9AQ8IZU1 332 aaPredicted RBP21.84■■□□□ 1.09
XBP1-204ENST00000405219 PCGF6Q9BYE7 350 aa21.8■■□□□ 1.08
XBP1-204ENST00000405219 ABCC8Q09428 1581 aa21.73■■□□□ 1.07
XBP1-204ENST00000405219 ATAD2BQ9ULI0 1458 aa21.72■■□□□ 1.07
XBP1-204ENST00000405219 BAZ1BQ9UIG0 1483 aaKnown RBP21.69■■□□□ 1.06
XBP1-204ENST00000405219 HRCP23327 699 aa21.68■■□□□ 1.06
XBP1-204ENST00000405219 TRIM26Q12899 539 aaPredicted RBP21.64■■□□□ 1.05
XBP1-204ENST00000405219 EEA1Q15075 1411 aa21.55■■□□□ 1.04
XBP1-204ENST00000405219 EHMT2Q96KQ7 1210 aa21.53■■□□□ 1.04
XBP1-204ENST00000405219 WRNQ14191 1432 aaPredicted RBP eCLIP21.49■■□□□ 1.03
XBP1-204ENST00000405219 HMGXB3Q12766 1538 aa21.47■■□□□ 1.03
XBP1-204ENST00000405219 SOGA1O94964 1423 aa21.41■■□□□ 1.02
XBP1-204ENST00000405219 NCAPD3P42695 1498 aa21.41■■□□□ 1.02
XBP1-204ENST00000405219 SYNJ1O43426 1573 aa21.39■■□□□ 1.01
XBP1-204ENST00000405219 CSRNP3Q8WYN3 585 aa21.34■■□□□ 1.01
XBP1-204ENST00000405219 TNIKQ9UKE5 1360 aa21.31■■□□□ 1
XBP1-204ENST00000405219 GOLGA3Q08378 1498 aa21.29■■□□□ 1
XBP1-204ENST00000405219 RUSC2Q8N2Y8 1516 aa21.29■■□□□ 1
XBP1-204ENST00000405219 CEP162Q5TB80 1403 aa21.26■□□□□ 0.99
XBP1-204ENST00000405219 TOP2BQ02880 1626 aa21.26■□□□□ 0.99
XBP1-204ENST00000405219 KIF21BO75037 1637 aa21.24■□□□□ 0.99
XBP1-204ENST00000405219 BIVM-ERCC5R4GMW8 1640 aa21.24■□□□□ 0.99
XBP1-204ENST00000405219 CEP164Q9UPV0 1460 aa21.22■□□□□ 0.99
XBP1-204ENST00000405219 PRDM2Q13029 1718 aa21.2■□□□□ 0.98
XBP1-204ENST00000405219 UBTFP17480 764 aaKnown RBP21.19■□□□□ 0.98
XBP1-204ENST00000405219 ZEB1P37275 1124 aaPredicted RBP21.17■□□□□ 0.98
XBP1-204ENST00000405219 CFTRP13569 1480 aa21.11■□□□□ 0.97
XBP1-204ENST00000405219 PPARGC1BQ86YN6 1023 aaKnown RBP21.05■□□□□ 0.96
XBP1-204ENST00000405219 CC2D2AQ9P2K1 1620 aa21.03■□□□□ 0.96
XBP1-204ENST00000405219 CUX1P39880 1505 aa21.03■□□□□ 0.96
XBP1-204ENST00000405219 CLIP1P30622 1438 aa20.96■□□□□ 0.95
XBP1-204ENST00000405219 ERICH3Q5RHP9 1530 aa20.96■□□□□ 0.95
XBP1-204ENST00000405219 RAPGEF2Q9Y4G8 1499 aa20.96■□□□□ 0.95
XBP1-204ENST00000405219 CADPSQ9ULU8 1353 aa20.93■□□□□ 0.94
XBP1-204ENST00000405219 KIF27Q86VH2 1401 aa20.92■□□□□ 0.94
XBP1-204ENST00000405219 PRXQ9BXM0 1461 aa20.88■□□□□ 0.93
XBP1-204ENST00000405219 VPS8Q8N3P4 1428 aa20.85■□□□□ 0.93
XBP1-204ENST00000405219 TTBK1Q5TCY1 1321 aaPredicted RBP20.8■□□□□ 0.92
XBP1-204ENST00000405219 APLP2Q06481 763 aa20.77■□□□□ 0.92
XBP1-204ENST00000405219 FANCD2Q9BXW9 1451 aa20.73■□□□□ 0.91
XBP1-204ENST00000405219 CCER1Q8TC90 406 aaPredicted RBP20.73■□□□□ 0.91
XBP1-204ENST00000405219 CUX2O14529 1486 aa20.72■□□□□ 0.91
XBP1-204ENST00000405219 FGD5Q6ZNL6 1462 aa20.72■□□□□ 0.91
XBP1-204ENST00000405219 DNMBPQ6XZF7 1577 aa20.68■□□□□ 0.9
XBP1-204ENST00000405219 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.67■□□□□ 0.9
XBP1-204ENST00000405219 RANGAP1P46060 587 aaPredicted RBP20.67■□□□□ 0.9
XBP1-204ENST00000405219 LAMC3Q9Y6N6 1575 aa20.64■□□□□ 0.9
XBP1-204ENST00000405219 ARAP1Q96P48 1450 aa20.64■□□□□ 0.89
XBP1-204ENST00000405219 IGF1RP08069 1367 aa20.6■□□□□ 0.89
XBP1-204ENST00000405219 TOPBP1Q92547 1522 aa20.58■□□□□ 0.88
XBP1-204ENST00000405219 CARMIL1Q5VZK9 1371 aa20.56■□□□□ 0.88
XBP1-204ENST00000405219 NESP48681 1621 aa20.56■□□□□ 0.88
XBP1-204ENST00000405219 ABCA10Q8WWZ4 1543 aa20.53■□□□□ 0.88
XBP1-204ENST00000405219 ARHGAP35Q9NRY4 1499 aa20.52■□□□□ 0.87
XBP1-204ENST00000405219 POLA1P09884 1462 aaPredicted RBP20.51■□□□□ 0.87
XBP1-204ENST00000405219 CUL7Q14999 1698 aa20.49■□□□□ 0.87
XBP1-204ENST00000405219 PDS5BQ9NTI5 1447 aa20.47■□□□□ 0.87
XBP1-204ENST00000405219 RAD54L2Q9Y4B4 1467 aa20.46■□□□□ 0.87
XBP1-204ENST00000405219 HNRNPUL2Q1KMD3 747 aaKnown RBP20.45■□□□□ 0.86
XBP1-204ENST00000405219 WDR97A6NE52 1622 aa20.44■□□□□ 0.86
XBP1-204ENST00000405219 URB2Q14146 1524 aaKnown RBP20.42■□□□□ 0.86
XBP1-204ENST00000405219 CTTNBP2Q8WZ74 1663 aa20.4■□□□□ 0.86
XBP1-204ENST00000405219 KIF21AQ7Z4S6 1674 aa20.39■□□□□ 0.85
XBP1-204ENST00000405219 MAP3K1Q13233 1512 aa20.38■□□□□ 0.85
XBP1-204ENST00000405219 FHAD1B1AJZ9 1412 aa20.34■□□□□ 0.85
XBP1-204ENST00000405219 EFCAB5A4FU69 1503 aa20.34■□□□□ 0.85
XBP1-204ENST00000405219 ABCA5Q8WWZ7 1642 aa20.34■□□□□ 0.85
XBP1-204ENST00000405219 KANK4Q5T7N3 995 aaPredicted RBP20.33■□□□□ 0.85
XBP1-204ENST00000405219 TIAM1Q13009 1591 aa20.33■□□□□ 0.84
XBP1-204ENST00000405219 RRBP1Q9P2E9 1410 aaKnown RBP20.31■□□□□ 0.84
XBP1-204ENST00000405219 CFAP43Q8NDM7 1665 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms