RNA–Protein interactions for RNA: ENST00000405137.1

CIR1P3-201, Transcript of corepressor interacting with RBPJ, 1 pseudogene 3, humanhuman

BASIC

Gene CIR1P3, Length 479 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIR1P3-201ENST00000405137 AEBP2Q6ZN18 517 aaPredicted RBP23.47■■□□□ 1.35
CIR1P3-201ENST00000405137 CHIC1Q5VXU3 224 aa22.42■■□□□ 1.18
CIR1P3-201ENST00000405137 SENP3Q9H4L4 574 aaPredicted RBP19.84■□□□□ 0.77
CIR1P3-201ENST00000405137 PHF23Q9BUL5 403 aaPredicted RBP19.76■□□□□ 0.75
CIR1P3-201ENST00000405137 POTEDQ86YR6 584 aa18.69■□□□□ 0.58
CIR1P3-201ENST00000405137 FOXD1Q16676 465 aa18.55■□□□□ 0.56
CIR1P3-201ENST00000405137 PLPPR3Q6T4P5 718 aa17.99■□□□□ 0.47
CIR1P3-201ENST00000405137 PPP6R1Q9UPN7 881 aa17.59■□□□□ 0.41
CIR1P3-201ENST00000405137 ADRA2BP18089 450 aa17.54■□□□□ 0.4
CIR1P3-201ENST00000405137 PIAS4Q8N2W9 510 aaPredicted RBP17.38■□□□□ 0.37
CIR1P3-201ENST00000405137 MSH5O43196 834 aa17.26■□□□□ 0.35
CIR1P3-201ENST00000405137 MAPK8IP2Q13387 824 aaPredicted RBP16.06■□□□□ 0.16
CIR1P3-201ENST00000405137 SCAF1Q9H7N4 1312 aaKnown RBP15.86■□□□□ 0.13
CIR1P3-201ENST00000405137 PPP4R3CPQ6ZMV5 832 aa15.84■□□□□ 0.13
CIR1P3-201ENST00000405137 DMRT2Q9Y5R5 561 aa15.8■□□□□ 0.12
CIR1P3-201ENST00000405137 CACNB1Q02641 598 aaPredicted RBP15.46■□□□□ 0.07
CIR1P3-201ENST00000405137 CNKSR2Q8WXI2 1034 aa15.44■□□□□ 0.06
CIR1P3-201ENST00000405137 HOXD11P31277 338 aaPredicted RBP15.29■□□□□ 0.04
CIR1P3-201ENST00000405137 RNF216Q9NWF9 866 aaPredicted RBP15.23■□□□□ 0.03
CIR1P3-201ENST00000405137 NCBP3Q53F19 620 aaKnown RBP15.21■□□□□ 0.03
CIR1P3-201ENST00000405137 DCAF8L1A6NGE4 600 aa15.2■□□□□ 0.02
CIR1P3-201ENST00000405137 NPM3O75607 178 aaKnown RBP15.12■□□□□ 0.01
CIR1P3-201ENST00000405137 KCNA4P22459 653 aa15.1■□□□□ 0.01
CIR1P3-201ENST00000405137 RNF39Q9H2S5 420 aa14.73□□□□□ -0.05
CIR1P3-201ENST00000405137 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.6□□□□□ -0.07
CIR1P3-201ENST00000405137 DNAJC5BQ9UF47 199 aa14.6□□□□□ -0.07
CIR1P3-201ENST00000405137 C1QBPQ07021 282 aaKnown RBP14.46□□□□□ -0.09
CIR1P3-201ENST00000405137 SLC4A2P04920 1241 aa14.4□□□□□ -0.1
CIR1P3-201ENST00000405137 POTEHQ6S545 545 aa14.4□□□□□ -0.1
CIR1P3-201ENST00000405137 U3KPZ7 1027 aaPredicted RBP14.37□□□□□ -0.11
CIR1P3-201ENST00000405137 SLC4A1APQ9BWU0 796 aaKnown RBP14.24□□□□□ -0.13
CIR1P3-201ENST00000405137 SPINK5Q9NQ38 1064 aaPredicted RBP14.13□□□□□ -0.15
CIR1P3-201ENST00000405137 CAPN15O75808 1086 aa14.03□□□□□ -0.16
CIR1P3-201ENST00000405137 ZBTB22O15209 634 aa13.93□□□□□ -0.18
CIR1P3-201ENST00000405137 FOXD4L1Q9NU39 408 aa13.92□□□□□ -0.18
CIR1P3-201ENST00000405137 MYCNP04198 464 aaPredicted RBP13.91□□□□□ -0.18
CIR1P3-201ENST00000405137 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.89□□□□□ -0.19
CIR1P3-201ENST00000405137 TRHP20396 242 aaPredicted RBP13.89□□□□□ -0.19
CIR1P3-201ENST00000405137 DSG3P32926 999 aa13.89□□□□□ -0.19
CIR1P3-201ENST00000405137 HNRNPUL2Q1KMD3 747 aaKnown RBP13.89□□□□□ -0.19
CIR1P3-201ENST00000405137 SAMD1Q6SPF0 538 aaPredicted RBP13.87□□□□□ -0.19
CIR1P3-201ENST00000405137 ABCB7O75027 752 aa13.79□□□□□ -0.2
CIR1P3-201ENST00000405137 APLP2Q06481 763 aa13.79□□□□□ -0.2
CIR1P3-201ENST00000405137 ZNF219Q9P2Y4 722 aaPredicted RBP13.77□□□□□ -0.21
CIR1P3-201ENST00000405137 ATF5Q9Y2D1 282 aaPredicted RBP13.71□□□□□ -0.21
CIR1P3-201ENST00000405137 POLA2Q14181 598 aa13.55□□□□□ -0.24
CIR1P3-201ENST00000405137 EHMT2Q96KQ7 1210 aa13.47□□□□□ -0.25
CIR1P3-201ENST00000405137 CSRNP3Q8WYN3 585 aa13.46□□□□□ -0.25
CIR1P3-201ENST00000405137 ATXN8OSP0DMR3 200 aa13.38□□□□□ -0.27
CIR1P3-201ENST00000405137 ZBTB12Q9Y330 459 aaPredicted RBP13.17□□□□□ -0.3
CIR1P3-201ENST00000405137 OSCARQ8IYS5 282 aa13.16□□□□□ -0.3
CIR1P3-201ENST00000405137 RBM42Q9BTD8 480 aaKnown RBP13.14□□□□□ -0.31
CIR1P3-201ENST00000405137 MKRN4PQ13434 485 aaPredicted RBP13.07□□□□□ -0.32
CIR1P3-201ENST00000405137 SP7Q8TDD2 431 aaPredicted RBP13.01□□□□□ -0.33
CIR1P3-201ENST00000405137 FBLN2P98095 1184 aa13□□□□□ -0.33
CIR1P3-201ENST00000405137 CHRDL2Q6WN34 429 aa12.94□□□□□ -0.34
CIR1P3-201ENST00000405137 AKT1S1Q96B36 256 aa12.92□□□□□ -0.34
CIR1P3-201ENST00000405137 REM2Q8IYK8 340 aaPredicted RBP12.86□□□□□ -0.35
CIR1P3-201ENST00000405137 SPDYE2BA6NHP3 402 aa12.83□□□□□ -0.36
CIR1P3-201ENST00000405137 SPDYE6P0CI01 402 aa12.83□□□□□ -0.36
CIR1P3-201ENST00000405137 SPDYE2Q495Y8 402 aa12.83□□□□□ -0.36
CIR1P3-201ENST00000405137 ZNF692Q9BU19 519 aaPredicted RBP12.76□□□□□ -0.37
CIR1P3-201ENST00000405137 PITPNM1O00562 1244 aa12.75□□□□□ -0.37
CIR1P3-201ENST00000405137 SSUH2Q9Y2M2 353 aa12.73□□□□□ -0.37
CIR1P3-201ENST00000405137 PIP4P2Q8N4L2 257 aa12.62□□□□□ -0.39
CIR1P3-201ENST00000405137 PABPN1Q86U42 306 aaKnown RBP eCLIP12.61□□□□□ -0.39
CIR1P3-201ENST00000405137 CLEC11AQ9Y240 323 aa12.6□□□□□ -0.39
CIR1P3-201ENST00000405137 SPDYE1Q8NFV5 336 aaPredicted RBP12.55□□□□□ -0.4
CIR1P3-201ENST00000405137 FXR2P51116 673 aaKnown RBP eCLIP12.54□□□□□ -0.4
CIR1P3-201ENST00000405137 SPDYE4A6NLX3 237 aa12.51□□□□□ -0.41
CIR1P3-201ENST00000405137 HAX1O00165 279 aa12.44□□□□□ -0.42
CIR1P3-201ENST00000405137 PRKAR2AP13861 404 aaKnown RBP12.41□□□□□ -0.42
CIR1P3-201ENST00000405137 CHADLQ6NUI6 762 aa12.38□□□□□ -0.43
CIR1P3-201ENST00000405137 PRR29P0C7W0 189 aa12.37□□□□□ -0.43
CIR1P3-201ENST00000405137 EVX2Q03828 476 aa12.37□□□□□ -0.43
CIR1P3-201ENST00000405137 PLSCR2Q9NRY7 297 aa12.24□□□□□ -0.45
CIR1P3-201ENST00000405137 PROM2Q8N271 834 aa12.23□□□□□ -0.45
CIR1P3-201ENST00000405137 LHX8Q68G74 356 aa12.2□□□□□ -0.46
CIR1P3-201ENST00000405137 STAG3Q9UJ98 1225 aa12.19□□□□□ -0.46
CIR1P3-201ENST00000405137 FKBP8Q14318 412 aa12.18□□□□□ -0.46
CIR1P3-201ENST00000405137 CREBZFQ9NS37 354 aa12.17□□□□□ -0.46
CIR1P3-201ENST00000405137 FARP1Q9Y4F1 1045 aaPredicted RBP12.15□□□□□ -0.46
CIR1P3-201ENST00000405137 C19orf67A6NJJ6 358 aa12.13□□□□□ -0.47
CIR1P3-201ENST00000405137 CD44P16070 742 aaKnown RBP12.02□□□□□ -0.49
CIR1P3-201ENST00000405137 MNX1P50219 401 aaPredicted RBP12.01□□□□□ -0.49
CIR1P3-201ENST00000405137 GABBR2O75899 941 aa11.94□□□□□ -0.5
CIR1P3-201ENST00000405137 MIER1Q8N108 512 aa11.9□□□□□ -0.5
CIR1P3-201ENST00000405137 ZRANB1Q9UGI0 708 aa11.89□□□□□ -0.51
CIR1P3-201ENST00000405137 NPM1P06748 294 aaKnown RBP eCLIP11.85□□□□□ -0.51
CIR1P3-201ENST00000405137 PLCD3Q8N3E9 789 aa11.83□□□□□ -0.52
CIR1P3-201ENST00000405137 ZNF579Q8NAF0 562 aaKnown RBP11.81□□□□□ -0.52
CIR1P3-201ENST00000405137 PHF12Q96QT6 1004 aa11.81□□□□□ -0.52
CIR1P3-201ENST00000405137 TSPYL2Q9H2G4 693 aaPredicted RBP11.77□□□□□ -0.53
CIR1P3-201ENST00000405137 PAK3O75914 559 aaPredicted RBP11.76□□□□□ -0.53
CIR1P3-201ENST00000405137 PLEKHG5O94827 1062 aa11.76□□□□□ -0.53
CIR1P3-201ENST00000405137 POTEIP0CG38 1075 aa11.76□□□□□ -0.53
CIR1P3-201ENST00000405137 RASEFQ8IZ41 740 aa11.74□□□□□ -0.53
CIR1P3-201ENST00000405137 GALR2O43603 387 aaPredicted RBP11.73□□□□□ -0.53
CIR1P3-201ENST00000405137 FBXO3Q9UK99 471 aa11.73□□□□□ -0.53
CIR1P3-201ENST00000405137 VASPP50552 380 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms