RNA–Protein interactions for RNA: ENST00000404459.1

LIPN-201, Transcript of lipase family member N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPN, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPN-201ENST00000404459 AEBP2Q6ZN18 517 aaPredicted RBP21.23■□□□□ 0.99
LIPN-201ENST00000404459 CHIC1Q5VXU3 224 aa19.85■□□□□ 0.77
LIPN-201ENST00000404459 SENP3Q9H4L4 574 aaPredicted RBP18.2■□□□□ 0.5
LIPN-201ENST00000404459 PHF23Q9BUL5 403 aaPredicted RBP17.91■□□□□ 0.46
LIPN-201ENST00000404459 FOXD1Q16676 465 aa17.04■□□□□ 0.32
LIPN-201ENST00000404459 POTEDQ86YR6 584 aa16.74■□□□□ 0.27
LIPN-201ENST00000404459 MSH5O43196 834 aa16.15■□□□□ 0.18
LIPN-201ENST00000404459 PIAS4Q8N2W9 510 aaPredicted RBP15.82■□□□□ 0.12
LIPN-201ENST00000404459 PPP6R1Q9UPN7 881 aa15.51■□□□□ 0.07
LIPN-201ENST00000404459 ADRA2BP18089 450 aa15.46■□□□□ 0.07
LIPN-201ENST00000404459 PLPPR3Q6T4P5 718 aa15.43■□□□□ 0.06
LIPN-201ENST00000404459 MAPK8IP2Q13387 824 aaPredicted RBP14.38□□□□□ -0.11
LIPN-201ENST00000404459 DMRT2Q9Y5R5 561 aa14.33□□□□□ -0.12
LIPN-201ENST00000404459 CACNB1Q02641 598 aaPredicted RBP14.27□□□□□ -0.13
LIPN-201ENST00000404459 SCAF1Q9H7N4 1312 aaKnown RBP14.13□□□□□ -0.15
LIPN-201ENST00000404459 DCAF8L1A6NGE4 600 aa13.9□□□□□ -0.18
LIPN-201ENST00000404459 RNF39Q9H2S5 420 aa13.71□□□□□ -0.21
LIPN-201ENST00000404459 HOXD11P31277 338 aaPredicted RBP13.57□□□□□ -0.24
LIPN-201ENST00000404459 C1QBPQ07021 282 aaKnown RBP13.49□□□□□ -0.25
LIPN-201ENST00000404459 PPP4R3CPQ6ZMV5 832 aa13.47□□□□□ -0.25
LIPN-201ENST00000404459 CNKSR2Q8WXI2 1034 aa13.33□□□□□ -0.28
LIPN-201ENST00000404459 RNF216Q9NWF9 866 aaPredicted RBP13.33□□□□□ -0.28
LIPN-201ENST00000404459 DNAJC5BQ9UF47 199 aa13.15□□□□□ -0.3
LIPN-201ENST00000404459 POTEHQ6S545 545 aa13.02□□□□□ -0.33
LIPN-201ENST00000404459 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.02□□□□□ -0.33
LIPN-201ENST00000404459 NCBP3Q53F19 620 aaKnown RBP12.78□□□□□ -0.36
LIPN-201ENST00000404459 CAPN15O75808 1086 aa12.68□□□□□ -0.38
LIPN-201ENST00000404459 DSG3P32926 999 aa12.68□□□□□ -0.38
LIPN-201ENST00000404459 SPINK5Q9NQ38 1064 aaPredicted RBP12.64□□□□□ -0.39
LIPN-201ENST00000404459 U3KPZ7 1027 aaPredicted RBP12.63□□□□□ -0.39
LIPN-201ENST00000404459 NPM3O75607 178 aaKnown RBP12.59□□□□□ -0.39
LIPN-201ENST00000404459 TRHP20396 242 aaPredicted RBP12.36□□□□□ -0.43
LIPN-201ENST00000404459 ABCB7O75027 752 aa12.34□□□□□ -0.43
LIPN-201ENST00000404459 KCNA4P22459 653 aa12.26□□□□□ -0.45
LIPN-201ENST00000404459 ZNF219Q9P2Y4 722 aaPredicted RBP12.24□□□□□ -0.45
LIPN-201ENST00000404459 APLP2Q06481 763 aa12.22□□□□□ -0.45
LIPN-201ENST00000404459 SLC4A2P04920 1241 aa12.15□□□□□ -0.46
LIPN-201ENST00000404459 RBM42Q9BTD8 480 aaKnown RBP12.12□□□□□ -0.47
LIPN-201ENST00000404459 CHRDL2Q6WN34 429 aa12.08□□□□□ -0.48
LIPN-201ENST00000404459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.07□□□□□ -0.48
LIPN-201ENST00000404459 HNRNPUL2Q1KMD3 747 aaKnown RBP12.07□□□□□ -0.48
LIPN-201ENST00000404459 SAMD1Q6SPF0 538 aaPredicted RBP11.97□□□□□ -0.49
LIPN-201ENST00000404459 SP7Q8TDD2 431 aaPredicted RBP11.93□□□□□ -0.5
LIPN-201ENST00000404459 POLA2Q14181 598 aa11.86□□□□□ -0.51
LIPN-201ENST00000404459 AKT1S1Q96B36 256 aa11.71□□□□□ -0.53
LIPN-201ENST00000404459 EHMT2Q96KQ7 1210 aa11.68□□□□□ -0.54
LIPN-201ENST00000404459 HAX1O00165 279 aa11.67□□□□□ -0.54
LIPN-201ENST00000404459 PIP4P2Q8N4L2 257 aa11.67□□□□□ -0.54
LIPN-201ENST00000404459 MYCNP04198 464 aaPredicted RBP11.65□□□□□ -0.54
LIPN-201ENST00000404459 REM2Q8IYK8 340 aaPredicted RBP11.62□□□□□ -0.55
LIPN-201ENST00000404459 SLC4A1APQ9BWU0 796 aaKnown RBP11.6□□□□□ -0.55
LIPN-201ENST00000404459 ZBTB12Q9Y330 459 aaPredicted RBP11.52□□□□□ -0.57
LIPN-201ENST00000404459 PITPNM1O00562 1244 aa11.5□□□□□ -0.57
LIPN-201ENST00000404459 FXR2P51116 673 aaKnown RBP eCLIP11.49□□□□□ -0.57
LIPN-201ENST00000404459 OSCARQ8IYS5 282 aa11.49□□□□□ -0.57
LIPN-201ENST00000404459 FOXD4L1Q9NU39 408 aa11.47□□□□□ -0.57
LIPN-201ENST00000404459 EVX2Q03828 476 aa11.44□□□□□ -0.58
LIPN-201ENST00000404459 ATF5Q9Y2D1 282 aaPredicted RBP11.44□□□□□ -0.58
LIPN-201ENST00000404459 ZBTB22O15209 634 aa11.23□□□□□ -0.61
LIPN-201ENST00000404459 PRKAR2AP13861 404 aaKnown RBP11.23□□□□□ -0.61
LIPN-201ENST00000404459 LHX8Q68G74 356 aa11.21□□□□□ -0.61
LIPN-201ENST00000404459 CLEC11AQ9Y240 323 aa11.18□□□□□ -0.62
LIPN-201ENST00000404459 GABBR2O75899 941 aa11.16□□□□□ -0.62
LIPN-201ENST00000404459 C19orf67A6NJJ6 358 aa11.14□□□□□ -0.63
LIPN-201ENST00000404459 ATXN8OSP0DMR3 200 aa11.14□□□□□ -0.63
LIPN-201ENST00000404459 SPDYE2BA6NHP3 402 aa11.13□□□□□ -0.63
LIPN-201ENST00000404459 SPDYE6P0CI01 402 aa11.13□□□□□ -0.63
LIPN-201ENST00000404459 SPDYE2Q495Y8 402 aa11.13□□□□□ -0.63
LIPN-201ENST00000404459 CSRNP3Q8WYN3 585 aa11.12□□□□□ -0.63
LIPN-201ENST00000404459 SPDYE1Q8NFV5 336 aaPredicted RBP11.09□□□□□ -0.63
LIPN-201ENST00000404459 FBLN2P98095 1184 aa11.05□□□□□ -0.64
LIPN-201ENST00000404459 PLSCR2Q9NRY7 297 aa11.03□□□□□ -0.64
LIPN-201ENST00000404459 CHADLQ6NUI6 762 aa11.01□□□□□ -0.65
LIPN-201ENST00000404459 ZNF692Q9BU19 519 aaPredicted RBP10.96□□□□□ -0.65
LIPN-201ENST00000404459 POTEIP0CG38 1075 aa10.89□□□□□ -0.67
LIPN-201ENST00000404459 SSUH2Q9Y2M2 353 aa10.89□□□□□ -0.67
LIPN-201ENST00000404459 PRR29P0C7W0 189 aa10.88□□□□□ -0.67
LIPN-201ENST00000404459 MKRN4PQ13434 485 aaPredicted RBP10.86□□□□□ -0.67
LIPN-201ENST00000404459 CD44P16070 742 aaKnown RBP10.83□□□□□ -0.68
LIPN-201ENST00000404459 PABPN1Q86U42 306 aaKnown RBP eCLIP10.77□□□□□ -0.69
LIPN-201ENST00000404459 DCBLD2Q96PD2 775 aa10.77□□□□□ -0.69
LIPN-201ENST00000404459 FARP1Q9Y4F1 1045 aaPredicted RBP10.74□□□□□ -0.69
LIPN-201ENST00000404459 CLCN6P51797 869 aa10.73□□□□□ -0.69
LIPN-201ENST00000404459 ZRANB1Q9UGI0 708 aa10.61□□□□□ -0.71
LIPN-201ENST00000404459 OTUD5Q96G74 571 aa10.6□□□□□ -0.71
LIPN-201ENST00000404459 POTEMA6NI47 508 aa10.59□□□□□ -0.71
LIPN-201ENST00000404459 ZNF579Q8NAF0 562 aaKnown RBP10.58□□□□□ -0.72
LIPN-201ENST00000404459 POTEB2H3BUK9 544 aa10.54□□□□□ -0.72
LIPN-201ENST00000404459 GALR2O43603 387 aaPredicted RBP10.54□□□□□ -0.72
LIPN-201ENST00000404459 POTEGQ6S5H5 508 aa10.54□□□□□ -0.72
LIPN-201ENST00000404459 CREBZFQ9NS37 354 aa10.43□□□□□ -0.74
LIPN-201ENST00000404459 PAK3O75914 559 aaPredicted RBP10.4□□□□□ -0.74
LIPN-201ENST00000404459 PHF12Q96QT6 1004 aa10.4□□□□□ -0.74
LIPN-201ENST00000404459 PCDH10Q9P2E7 1040 aa10.39□□□□□ -0.75
LIPN-201ENST00000404459 PELP1Q8IZL8 1130 aaKnown RBP10.38□□□□□ -0.75
LIPN-201ENST00000404459 SLC24A1O60721 1099 aa10.36□□□□□ -0.75
LIPN-201ENST00000404459 STAG3Q9UJ98 1225 aa10.33□□□□□ -0.76
LIPN-201ENST00000404459 SPDYE4A6NLX3 237 aa10.31□□□□□ -0.76
LIPN-201ENST00000404459 RTN4Q9NQC3 1192 aaKnown RBP10.31□□□□□ -0.76
LIPN-201ENST00000404459 METRNQ9UJH8 293 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms