RNA–Protein interactions for RNA: ENST00000403835.2

NPM1P38-201, Transcript of nucleophosmin 1 pseudogene 38, humanhuman

BASIC

Gene NPM1P38, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1P38-201ENST00000403835 AEBP2Q6ZN18 517 aaPredicted RBP20.16■□□□□ 0.82
NPM1P38-201ENST00000403835 CHIC1Q5VXU3 224 aa19.23■□□□□ 0.67
NPM1P38-201ENST00000403835 SENP3Q9H4L4 574 aaPredicted RBP17.38■□□□□ 0.37
NPM1P38-201ENST00000403835 PHF23Q9BUL5 403 aaPredicted RBP17.04■□□□□ 0.32
NPM1P38-201ENST00000403835 POTEDQ86YR6 584 aa16.51■□□□□ 0.23
NPM1P38-201ENST00000403835 FOXD1Q16676 465 aa16.27■□□□□ 0.2
NPM1P38-201ENST00000403835 MSH5O43196 834 aa15.57■□□□□ 0.08
NPM1P38-201ENST00000403835 PLPPR3Q6T4P5 718 aa15.4■□□□□ 0.06
NPM1P38-201ENST00000403835 PIAS4Q8N2W9 510 aaPredicted RBP15.07■□□□□ 0
NPM1P38-201ENST00000403835 PPP6R1Q9UPN7 881 aa15.01□□□□□ -0.01
NPM1P38-201ENST00000403835 ADRA2BP18089 450 aa14.95□□□□□ -0.02
NPM1P38-201ENST00000403835 CACNB1Q02641 598 aaPredicted RBP13.89□□□□□ -0.19
NPM1P38-201ENST00000403835 MAPK8IP2Q13387 824 aaPredicted RBP13.71□□□□□ -0.21
NPM1P38-201ENST00000403835 SCAF1Q9H7N4 1312 aaKnown RBP13.7□□□□□ -0.22
NPM1P38-201ENST00000403835 DMRT2Q9Y5R5 561 aa13.65□□□□□ -0.22
NPM1P38-201ENST00000403835 PPP4R3CPQ6ZMV5 832 aa13.5□□□□□ -0.25
NPM1P38-201ENST00000403835 SLC24A1O60721 1099 aa13.28□□□□□ -0.28
NPM1P38-201ENST00000403835 DCAF8L1A6NGE4 600 aa13.26□□□□□ -0.29
NPM1P38-201ENST00000403835 CNKSR2Q8WXI2 1034 aa13.24□□□□□ -0.29
NPM1P38-201ENST00000403835 HOXD11P31277 338 aaPredicted RBP13.19□□□□□ -0.3
NPM1P38-201ENST00000403835 RNF39Q9H2S5 420 aa13.17□□□□□ -0.3
NPM1P38-201ENST00000403835 RNF216Q9NWF9 866 aaPredicted RBP13.11□□□□□ -0.31
NPM1P38-201ENST00000403835 NCBP3Q53F19 620 aaKnown RBP13.01□□□□□ -0.33
NPM1P38-201ENST00000403835 C1QBPQ07021 282 aaKnown RBP12.96□□□□□ -0.33
NPM1P38-201ENST00000403835 NPM3O75607 178 aaKnown RBP12.82□□□□□ -0.36
NPM1P38-201ENST00000403835 POTEHQ6S545 545 aa12.81□□□□□ -0.36
NPM1P38-201ENST00000403835 DNAJC5BQ9UF47 199 aa12.75□□□□□ -0.37
NPM1P38-201ENST00000403835 KCNA4P22459 653 aa12.73□□□□□ -0.37
NPM1P38-201ENST00000403835 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.52□□□□□ -0.41
NPM1P38-201ENST00000403835 EHMT2Q96KQ7 1210 aa12.42□□□□□ -0.42
NPM1P38-201ENST00000403835 U3KPZ7 1027 aaPredicted RBP12.3□□□□□ -0.44
NPM1P38-201ENST00000403835 SLC4A2P04920 1241 aa12.23□□□□□ -0.45
NPM1P38-201ENST00000403835 SLC4A1APQ9BWU0 796 aaKnown RBP12.11□□□□□ -0.47
NPM1P38-201ENST00000403835 DSG3P32926 999 aa12.08□□□□□ -0.48
NPM1P38-201ENST00000403835 SPINK5Q9NQ38 1064 aaPredicted RBP12.08□□□□□ -0.48
NPM1P38-201ENST00000403835 CAPN15O75808 1086 aa12.05□□□□□ -0.48
NPM1P38-201ENST00000403835 DAXXQ9UER7 740 aaPredicted RBP11.99□□□□□ -0.49
NPM1P38-201ENST00000403835 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.98□□□□□ -0.49
NPM1P38-201ENST00000403835 APLP2Q06481 763 aa11.98□□□□□ -0.49
NPM1P38-201ENST00000403835 HNRNPUL2Q1KMD3 747 aaKnown RBP11.98□□□□□ -0.49
NPM1P38-201ENST00000403835 RTN4Q9NQC3 1192 aaKnown RBP11.96□□□□□ -0.49
NPM1P38-201ENST00000403835 SAMD1Q6SPF0 538 aaPredicted RBP11.92□□□□□ -0.5
NPM1P38-201ENST00000403835 ZNF219Q9P2Y4 722 aaPredicted RBP11.89□□□□□ -0.51
NPM1P38-201ENST00000403835 AMER1Q5JTC6 1135 aaPredicted RBP11.88□□□□□ -0.51
NPM1P38-201ENST00000403835 MYCNP04198 464 aaPredicted RBP11.87□□□□□ -0.51
NPM1P38-201ENST00000403835 TRHP20396 242 aaPredicted RBP11.87□□□□□ -0.51
NPM1P38-201ENST00000403835 CSRNP3Q8WYN3 585 aa11.85□□□□□ -0.51
NPM1P38-201ENST00000403835 FOXD4L1Q9NU39 408 aa11.79□□□□□ -0.52
NPM1P38-201ENST00000403835 ABCB7O75027 752 aa11.77□□□□□ -0.53
NPM1P38-201ENST00000403835 ZBTB22O15209 634 aa11.75□□□□□ -0.53
NPM1P38-201ENST00000403835 CHRDL2Q6WN34 429 aa11.64□□□□□ -0.55
NPM1P38-201ENST00000403835 SP7Q8TDD2 431 aaPredicted RBP11.63□□□□□ -0.55
NPM1P38-201ENST00000403835 RBM42Q9BTD8 480 aaKnown RBP11.59□□□□□ -0.55
NPM1P38-201ENST00000403835 POLA2Q14181 598 aa11.57□□□□□ -0.56
NPM1P38-201ENST00000403835 ATF5Q9Y2D1 282 aaPredicted RBP11.57□□□□□ -0.56
NPM1P38-201ENST00000403835 ATXN8OSP0DMR3 200 aa11.44□□□□□ -0.58
NPM1P38-201ENST00000403835 ARXQ96QS3 562 aa11.41□□□□□ -0.58
NPM1P38-201ENST00000403835 ZBTB12Q9Y330 459 aaPredicted RBP11.38□□□□□ -0.59
NPM1P38-201ENST00000403835 TTBK1Q5TCY1 1321 aaPredicted RBP11.36□□□□□ -0.59
NPM1P38-201ENST00000403835 PRKCSHP14314 528 aaPredicted RBP11.34□□□□□ -0.59
NPM1P38-201ENST00000403835 HAX1O00165 279 aa11.26□□□□□ -0.61
NPM1P38-201ENST00000403835 OSCARQ8IYS5 282 aa11.22□□□□□ -0.61
NPM1P38-201ENST00000403835 PELP1Q8IZL8 1130 aaKnown RBP11.21□□□□□ -0.61
NPM1P38-201ENST00000403835 MYT1Q01538 1121 aa11.2□□□□□ -0.62
NPM1P38-201ENST00000403835 AKT1S1Q96B36 256 aa11.19□□□□□ -0.62
NPM1P38-201ENST00000403835 PIP4P2Q8N4L2 257 aa11.18□□□□□ -0.62
NPM1P38-201ENST00000403835 TIMELESSQ9UNS1 1208 aa11.15□□□□□ -0.62
NPM1P38-201ENST00000403835 TAOK2Q9UL54 1235 aa11.13□□□□□ -0.63
NPM1P38-201ENST00000403835 FBLN2P98095 1184 aa11.12□□□□□ -0.63
NPM1P38-201ENST00000403835 BCANQ96GW7 911 aa11.08□□□□□ -0.64
NPM1P38-201ENST00000403835 ERICH6Q7L0X2 663 aa11.07□□□□□ -0.64
NPM1P38-201ENST00000403835 REM2Q8IYK8 340 aaPredicted RBP11.07□□□□□ -0.64
NPM1P38-201ENST00000403835 MKRN4PQ13434 485 aaPredicted RBP11.05□□□□□ -0.64
NPM1P38-201ENST00000403835 SPDYE2BA6NHP3 402 aa11.04□□□□□ -0.64
NPM1P38-201ENST00000403835 SPDYE6P0CI01 402 aa11.04□□□□□ -0.64
NPM1P38-201ENST00000403835 RANGAP1P46060 587 aaPredicted RBP11.04□□□□□ -0.64
NPM1P38-201ENST00000403835 SPDYE2Q495Y8 402 aa11.04□□□□□ -0.64
NPM1P38-201ENST00000403835 HOMEZQ8IX15 550 aa11.03□□□□□ -0.64
NPM1P38-201ENST00000403835 TULP1O00294 542 aaPredicted RBP11□□□□□ -0.65
NPM1P38-201ENST00000403835 EVX2Q03828 476 aa10.97□□□□□ -0.65
NPM1P38-201ENST00000403835 PLSCR2Q9NRY7 297 aa10.97□□□□□ -0.65
NPM1P38-201ENST00000403835 PITPNM1O00562 1244 aa10.96□□□□□ -0.65
NPM1P38-201ENST00000403835 FXR2P51116 673 aaKnown RBP eCLIP10.96□□□□□ -0.65
NPM1P38-201ENST00000403835 LHX8Q68G74 356 aa10.92□□□□□ -0.66
NPM1P38-201ENST00000403835 TPRNQ4KMQ1 711 aa10.91□□□□□ -0.66
NPM1P38-201ENST00000403835 SSUH2Q9Y2M2 353 aa10.91□□□□□ -0.66
NPM1P38-201ENST00000403835 ZNF692Q9BU19 519 aaPredicted RBP10.88□□□□□ -0.67
NPM1P38-201ENST00000403835 PLCB2Q00722 1185 aa10.87□□□□□ -0.67
NPM1P38-201ENST00000403835 SPDYE1Q8NFV5 336 aaPredicted RBP10.81□□□□□ -0.68
NPM1P38-201ENST00000403835 CLEC11AQ9Y240 323 aa10.75□□□□□ -0.69
NPM1P38-201ENST00000403835 GTF3C3Q9Y5Q9 886 aa10.75□□□□□ -0.69
NPM1P38-201ENST00000403835 PABPN1Q86U42 306 aaKnown RBP eCLIP10.73□□□□□ -0.69
NPM1P38-201ENST00000403835 HAP1P54257 671 aaPredicted RBP10.72□□□□□ -0.69
NPM1P38-201ENST00000403835 GABBR2O75899 941 aa10.71□□□□□ -0.69
NPM1P38-201ENST00000403835 PODXL2Q9NZ53 605 aa10.68□□□□□ -0.7
NPM1P38-201ENST00000403835 PRKAR2AP13861 404 aaKnown RBP10.66□□□□□ -0.7
NPM1P38-201ENST00000403835 C19orf67A6NJJ6 358 aa10.64□□□□□ -0.71
NPM1P38-201ENST00000403835 KLHL34Q8N239 644 aa10.62□□□□□ -0.71
NPM1P38-201ENST00000403835 FKBP8Q14318 412 aa10.61□□□□□ -0.71
NPM1P38-201ENST00000403835 PRR29P0C7W0 189 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms