RNA–Protein interactions for RNA: ENST00000403750.5

PPARGC1B-204, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PPARGC1B, Length 3,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-204ENST00000403750 NISCHQ9Y2I1 1504 aa23.01■■□□□ 1.27
PPARGC1B-204ENST00000403750 SHROOM4Q9ULL8 1493 aa20.53■□□□□ 0.88
PPARGC1B-204ENST00000403750 SUPT5HO00267 1087 aaKnown RBP20.25■□□□□ 0.83
PPARGC1B-204ENST00000403750 DCAF8L2P0C7V8 631 aa20■□□□□ 0.79
PPARGC1B-204ENST00000403750 CHIC1Q5VXU3 224 aa19.42■□□□□ 0.7
PPARGC1B-204ENST00000403750 ZCCHC6Q5VYS8 1495 aaKnown RBP19.42■□□□□ 0.7
PPARGC1B-204ENST00000403750 MYO15BQ96JP2 1530 aa19.35■□□□□ 0.69
PPARGC1B-204ENST00000403750 PCGF6Q9BYE7 350 aa19.33■□□□□ 0.69
PPARGC1B-204ENST00000403750 LOC105371045A0A1W2PR82 267 aa19.16■□□□□ 0.66
PPARGC1B-204ENST00000403750 HRCP23327 699 aa19.14■□□□□ 0.66
PPARGC1B-204ENST00000403750 CCDC180Q9P1Z9 1646 aa19.14■□□□□ 0.65
PPARGC1B-204ENST00000403750 PPARGC1BQ86YN6 1023 aaKnown RBP19.09■□□□□ 0.65
PPARGC1B-204ENST00000403750 EHMT2Q96KQ7 1210 aa18.96■□□□□ 0.63
PPARGC1B-204ENST00000403750 FAM9AQ8IZU1 332 aaPredicted RBP18.83■□□□□ 0.61
PPARGC1B-204ENST00000403750 TRIM41Q8WV44 630 aa18.64■□□□□ 0.57
PPARGC1B-204ENST00000403750 TRIM26Q12899 539 aaPredicted RBP18.6■□□□□ 0.57
PPARGC1B-204ENST00000403750 DCAF1Q9Y4B6 1507 aa18.55■□□□□ 0.56
PPARGC1B-204ENST00000403750 SCRIBQ14160 1630 aa18.53■□□□□ 0.56
PPARGC1B-204ENST00000403750 RSF1Q96T23 1441 aaPredicted RBP18.42■□□□□ 0.54
PPARGC1B-204ENST00000403750 ABCC9O60706 1549 aa18.34■□□□□ 0.53
PPARGC1B-204ENST00000403750 TTBK1Q5TCY1 1321 aaPredicted RBP18.33■□□□□ 0.52
PPARGC1B-204ENST00000403750 RB1CC1Q8TDY2 1594 aa18.29■□□□□ 0.52
PPARGC1B-204ENST00000403750 CECR2Q9BXF3 1484 aa18.19■□□□□ 0.5
PPARGC1B-204ENST00000403750 ZEB1P37275 1124 aaPredicted RBP18.14■□□□□ 0.49
PPARGC1B-204ENST00000403750 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.13■□□□□ 0.49
PPARGC1B-204ENST00000403750 MROH2BQ7Z745 1585 aa18.05■□□□□ 0.48
PPARGC1B-204ENST00000403750 CCER1Q8TC90 406 aaPredicted RBP18.04■□□□□ 0.48
PPARGC1B-204ENST00000403750 WIZO95785 1651 aa17.97■□□□□ 0.47
PPARGC1B-204ENST00000403750 SCAF1Q9H7N4 1312 aaKnown RBP17.9■□□□□ 0.46
PPARGC1B-204ENST00000403750 UBTFP17480 764 aaKnown RBP17.85■□□□□ 0.45
PPARGC1B-204ENST00000403750 RANGAP1P46060 587 aaPredicted RBP17.82■□□□□ 0.44
PPARGC1B-204ENST00000403750 NACADO15069 1562 aa17.81■□□□□ 0.44
PPARGC1B-204ENST00000403750 PABPN1Q86U42 306 aaKnown RBP eCLIP17.79■□□□□ 0.44
PPARGC1B-204ENST00000403750 ABCC8Q09428 1581 aa17.79■□□□□ 0.44
PPARGC1B-204ENST00000403750 CCDC88BA6NC98 1476 aa17.73■□□□□ 0.43
PPARGC1B-204ENST00000403750 DIEXFQ68CQ4 756 aaKnown RBP17.7■□□□□ 0.42
PPARGC1B-204ENST00000403750 SOGA1O94964 1423 aa17.69■□□□□ 0.42
PPARGC1B-204ENST00000403750 NEUROD1Q13562 356 aa17.66■□□□□ 0.42
PPARGC1B-204ENST00000403750 HNRNPUL2Q1KMD3 747 aaKnown RBP17.65■□□□□ 0.42
PPARGC1B-204ENST00000403750 YTHDC1Q96MU7 727 aaKnown RBP17.63■□□□□ 0.41
PPARGC1B-204ENST00000403750 BAZ1AQ9NRL2 1556 aaPredicted RBP17.63■□□□□ 0.41
PPARGC1B-204ENST00000403750 CEP162Q5TB80 1403 aa17.62■□□□□ 0.41
PPARGC1B-204ENST00000403750 CSRNP3Q8WYN3 585 aa17.62■□□□□ 0.41
PPARGC1B-204ENST00000403750 RUSC2Q8N2Y8 1516 aa17.61■□□□□ 0.41
PPARGC1B-204ENST00000403750 ACIN1Q9UKV3 1341 aaKnown RBP17.58■□□□□ 0.4
PPARGC1B-204ENST00000403750 GTF3C3Q9Y5Q9 886 aa17.56■□□□□ 0.4
PPARGC1B-204ENST00000403750 TOP2AP11388 1531 aaKnown RBP17.48■□□□□ 0.39
PPARGC1B-204ENST00000403750 CENPBP07199 599 aaPredicted RBP17.48■□□□□ 0.39
PPARGC1B-204ENST00000403750 SMARCA4P51532 1647 aa17.46■□□□□ 0.39
PPARGC1B-204ENST00000403750 SMARCA2P51531 1590 aa17.46■□□□□ 0.38
PPARGC1B-204ENST00000403750 EIF4G1Q04637 1599 aaKnown RBP17.46■□□□□ 0.38
PPARGC1B-204ENST00000403750 TNIKQ9UKE5 1360 aa17.44■□□□□ 0.38
PPARGC1B-204ENST00000403750 APLP2Q06481 763 aa17.43■□□□□ 0.38
PPARGC1B-204ENST00000403750 PELP1Q8IZL8 1130 aaKnown RBP17.43■□□□□ 0.38
PPARGC1B-204ENST00000403750 ZNF316A6NFI3 1004 aaPredicted RBP17.4■□□□□ 0.38
PPARGC1B-204ENST00000403750 WRNQ14191 1432 aaPredicted RBP eCLIP17.36■□□□□ 0.37
PPARGC1B-204ENST00000403750 GOLGA3Q08378 1498 aa17.32■□□□□ 0.36
PPARGC1B-204ENST00000403750 MIER1Q8N108 512 aa17.32■□□□□ 0.36
PPARGC1B-204ENST00000403750 UNC13AQ9UPW8 1703 aa17.29■□□□□ 0.36
PPARGC1B-204ENST00000403750 CLIP1P30622 1438 aa17.27■□□□□ 0.36
PPARGC1B-204ENST00000403750 ITGAEP38570 1179 aa17.25■□□□□ 0.35
PPARGC1B-204ENST00000403750 EEA1Q15075 1411 aa17.24■□□□□ 0.35
PPARGC1B-204ENST00000403750 SYNJ1O43426 1573 aa17.18■□□□□ 0.34
PPARGC1B-204ENST00000403750 RAPGEF2Q9Y4G8 1499 aa17.18■□□□□ 0.34
PPARGC1B-204ENST00000403750 CEP164Q9UPV0 1460 aa17.17■□□□□ 0.34
PPARGC1B-204ENST00000403750 BAZ1BQ9UIG0 1483 aaKnown RBP17.11■□□□□ 0.33
PPARGC1B-204ENST00000403750 KANK4Q5T7N3 995 aaPredicted RBP17.1■□□□□ 0.33
PPARGC1B-204ENST00000403750 BICRAQ9NZM4 1560 aa17.1■□□□□ 0.33
PPARGC1B-204ENST00000403750 VPS8Q8N3P4 1428 aa17.1■□□□□ 0.33
PPARGC1B-204ENST00000403750 ATAD2BQ9ULI0 1458 aa17.06■□□□□ 0.32
PPARGC1B-204ENST00000403750 ATP1B4Q9UN42 357 aaPredicted RBP17.03■□□□□ 0.32
PPARGC1B-204ENST00000403750 KIF21BO75037 1637 aa16.98■□□□□ 0.31
PPARGC1B-204ENST00000403750 P3H3Q8IVL6 736 aa16.94■□□□□ 0.3
PPARGC1B-204ENST00000403750 DHX57Q6P158 1386 aaKnown RBP16.9■□□□□ 0.3
PPARGC1B-204ENST00000403750 PEG3Q9GZU2 1588 aa16.87■□□□□ 0.29
PPARGC1B-204ENST00000403750 FAM50AQ14320 339 aaKnown RBP16.85■□□□□ 0.29
PPARGC1B-204ENST00000403750 KCNH8Q96L42 1107 aa16.85■□□□□ 0.29
PPARGC1B-204ENST00000403750 HIRIP3Q9BW71 556 aaPredicted RBP16.84■□□□□ 0.29
PPARGC1B-204ENST00000403750 ARAP1Q96P48 1450 aa16.84■□□□□ 0.29
PPARGC1B-204ENST00000403750 TOP2BQ02880 1626 aa16.81■□□□□ 0.28
PPARGC1B-204ENST00000403750 BCANQ96GW7 911 aa16.79■□□□□ 0.28
PPARGC1B-204ENST00000403750 KIF27Q86VH2 1401 aa16.78■□□□□ 0.28
PPARGC1B-204ENST00000403750 SIN3AQ96ST3 1273 aa16.78■□□□□ 0.28
PPARGC1B-204ENST00000403750 PRXQ9BXM0 1461 aa16.76■□□□□ 0.27
PPARGC1B-204ENST00000403750 CCNB3Q8WWL7 1395 aa16.76■□□□□ 0.27
PPARGC1B-204ENST00000403750 DDX10Q13206 875 aaKnown RBP16.74■□□□□ 0.27
PPARGC1B-204ENST00000403750 SUPT16HQ9Y5B9 1047 aaKnown RBP16.74■□□□□ 0.27
PPARGC1B-204ENST00000403750 CUX1P39880 1505 aa16.74■□□□□ 0.27
PPARGC1B-204ENST00000403750 RAB3GAP2Q9H2M9 1393 aa16.7■□□□□ 0.26
PPARGC1B-204ENST00000403750 CLSPNQ9HAW4 1339 aa16.69■□□□□ 0.26
PPARGC1B-204ENST00000403750 CUX2O14529 1486 aa16.69■□□□□ 0.26
PPARGC1B-204ENST00000403750 ARHGAP35Q9NRY4 1499 aa16.69■□□□□ 0.26
PPARGC1B-204ENST00000403750 ERICH3Q5RHP9 1530 aa16.65■□□□□ 0.26
PPARGC1B-204ENST00000403750 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
PPARGC1B-204ENST00000403750 RRBP1Q9P2E9 1410 aaKnown RBP16.63■□□□□ 0.25
PPARGC1B-204ENST00000403750 IGF1RP08069 1367 aa16.61■□□□□ 0.25
PPARGC1B-204ENST00000403750 TRIM52Q96A61 297 aa16.6■□□□□ 0.25
PPARGC1B-204ENST00000403750 CARMIL1Q5VZK9 1371 aa16.6■□□□□ 0.25
PPARGC1B-204ENST00000403750 PHLDB1Q86UU1 1377 aa16.58■□□□□ 0.24
PPARGC1B-204ENST00000403750 NCAPD3P42695 1498 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms