RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 SLC24A1O60721 1099 aa11.96□□□□□ -0.5
CNGA1-202ENST00000402813 CHIC1Q5VXU3 224 aa11.31□□□□□ -0.6
CNGA1-202ENST00000402813 DAXXQ9UER7 740 aaPredicted RBP10.92□□□□□ -0.66
CNGA1-202ENST00000402813 EHMT2Q96KQ7 1210 aa10.9□□□□□ -0.67
CNGA1-202ENST00000402813 NCBP3Q53F19 620 aaKnown RBP10.73□□□□□ -0.69
CNGA1-202ENST00000402813 RTN4Q9NQC3 1192 aaKnown RBP10.66□□□□□ -0.7
CNGA1-202ENST00000402813 PLPPR3Q6T4P5 718 aa10.64□□□□□ -0.71
CNGA1-202ENST00000402813 TTBK1Q5TCY1 1321 aaPredicted RBP10.59□□□□□ -0.71
CNGA1-202ENST00000402813 AMER1Q5JTC6 1135 aaPredicted RBP10.58□□□□□ -0.72
CNGA1-202ENST00000402813 AEBP2Q6ZN18 517 aaPredicted RBP10.53□□□□□ -0.72
CNGA1-202ENST00000402813 MYT1Q01538 1121 aa10.48□□□□□ -0.73
CNGA1-202ENST00000402813 APLP2Q06481 763 aa10.4□□□□□ -0.74
CNGA1-202ENST00000402813 PELP1Q8IZL8 1130 aaKnown RBP10.37□□□□□ -0.75
CNGA1-202ENST00000402813 ARXQ96QS3 562 aa10.34□□□□□ -0.75
CNGA1-202ENST00000402813 KCNA4P22459 653 aa10.3□□□□□ -0.76
CNGA1-202ENST00000402813 CSRNP3Q8WYN3 585 aa10.26□□□□□ -0.77
CNGA1-202ENST00000402813 ERICH6Q7L0X2 663 aa10.22□□□□□ -0.77
CNGA1-202ENST00000402813 PRKCSHP14314 528 aaPredicted RBP10.16□□□□□ -0.78
CNGA1-202ENST00000402813 PHF23Q9BUL5 403 aaPredicted RBP10.14□□□□□ -0.79
CNGA1-202ENST00000402813 TIMELESSQ9UNS1 1208 aa10.05□□□□□ -0.8
CNGA1-202ENST00000402813 TAOK2Q9UL54 1235 aa9.96□□□□□ -0.81
CNGA1-202ENST00000402813 RANGAP1P46060 587 aaPredicted RBP9.95□□□□□ -0.82
CNGA1-202ENST00000402813 HOMEZQ8IX15 550 aa9.95□□□□□ -0.82
CNGA1-202ENST00000402813 BCANQ96GW7 911 aa9.89□□□□□ -0.83
CNGA1-202ENST00000402813 TULP1O00294 542 aaPredicted RBP9.87□□□□□ -0.83
CNGA1-202ENST00000402813 TPRNQ4KMQ1 711 aa9.73□□□□□ -0.85
CNGA1-202ENST00000402813 SLC4A1APQ9BWU0 796 aaKnown RBP9.71□□□□□ -0.85
CNGA1-202ENST00000402813 PLCB2Q00722 1185 aa9.68□□□□□ -0.86
CNGA1-202ENST00000402813 KLHL34Q8N239 644 aa9.66□□□□□ -0.86
CNGA1-202ENST00000402813 GTF3C3Q9Y5Q9 886 aa9.65□□□□□ -0.86
CNGA1-202ENST00000402813 EIF5BO60841 1220 aaKnown RBP9.62□□□□□ -0.87
CNGA1-202ENST00000402813 PODXL2Q9NZ53 605 aa9.62□□□□□ -0.87
CNGA1-202ENST00000402813 HAP1P54257 671 aaPredicted RBP9.48□□□□□ -0.89
CNGA1-202ENST00000402813 NISCHQ9Y2I1 1504 aa9.48□□□□□ -0.89
CNGA1-202ENST00000402813 NPM2Q86SE8 214 aaKnown RBP9.46□□□□□ -0.89
CNGA1-202ENST00000402813 FBXO3Q9UK99 471 aa9.46□□□□□ -0.89
CNGA1-202ENST00000402813 TMEM132AQ24JP5 1023 aa9.45□□□□□ -0.9
CNGA1-202ENST00000402813 VSIG10Q8N0Z9 540 aa9.43□□□□□ -0.9
CNGA1-202ENST00000402813 POTEDQ86YR6 584 aa9.35□□□□□ -0.91
CNGA1-202ENST00000402813 C14orf37Q86TY3 774 aa9.32□□□□□ -0.92
CNGA1-202ENST00000402813 ZBTB22O15209 634 aa9.31□□□□□ -0.92
CNGA1-202ENST00000402813 TRIM26Q12899 539 aaPredicted RBP9.22□□□□□ -0.93
CNGA1-202ENST00000402813 KDM2AQ9Y2K7 1162 aa9.19□□□□□ -0.94
CNGA1-202ENST00000402813 PLEKHG5O94827 1062 aa9.18□□□□□ -0.94
CNGA1-202ENST00000402813 DCAF8L2P0C7V8 631 aa9.16□□□□□ -0.94
CNGA1-202ENST00000402813 FKBP8Q14318 412 aa9.12□□□□□ -0.95
CNGA1-202ENST00000402813 HRCP23327 699 aa9.12□□□□□ -0.95
CNGA1-202ENST00000402813 ADRA2BP18089 450 aa9.1□□□□□ -0.95
CNGA1-202ENST00000402813 LOC105371045A0A1W2PR82 267 aa9.09□□□□□ -0.95
CNGA1-202ENST00000402813 SUPT5HO00267 1087 aaKnown RBP9.06□□□□□ -0.96
CNGA1-202ENST00000402813 UBTFP17480 764 aaKnown RBP9.05□□□□□ -0.96
CNGA1-202ENST00000402813 FBLN2P98095 1184 aa9.04□□□□□ -0.96
CNGA1-202ENST00000402813 NPM3O75607 178 aaKnown RBP8.96□□□□□ -0.97
CNGA1-202ENST00000402813 PDIA4P13667 645 aaKnown RBP8.94□□□□□ -0.98
CNGA1-202ENST00000402813 CNKSR2Q8WXI2 1034 aa8.93□□□□□ -0.98
CNGA1-202ENST00000402813 CDK11AQ9UQ88 783 aaPredicted RBP8.93□□□□□ -0.98
CNGA1-202ENST00000402813 BCL11AQ9H165 835 aa8.92□□□□□ -0.98
CNGA1-202ENST00000402813 SENP3Q9H4L4 574 aaPredicted RBP8.91□□□□□ -0.98
CNGA1-202ENST00000402813 SHROOM4Q9ULL8 1493 aa8.91□□□□□ -0.98
CNGA1-202ENST00000402813 HMGB1P09429 215 aaKnown RBP8.87□□□□□ -0.99
CNGA1-202ENST00000402813 CDK11BP21127 795 aaKnown RBP8.87□□□□□ -0.99
CNGA1-202ENST00000402813 UBE2Q2Q8WVN8 375 aa8.87□□□□□ -0.99
CNGA1-202ENST00000402813 CHMP4AQ9BY43 222 aa8.87□□□□□ -0.99
CNGA1-202ENST00000402813 SAMD1Q6SPF0 538 aaPredicted RBP8.85□□□□□ -0.99
CNGA1-202ENST00000402813 CCDC9Q9Y3X0 531 aaKnown RBP8.83□□□□□ -1
CNGA1-202ENST00000402813 NBR1Q14596 966 aa8.82□□□□□ -1
CNGA1-202ENST00000402813 HSP90B1P14625 803 aaKnown RBP8.81□□□□□ -1
CNGA1-202ENST00000402813 PPP6R1Q9UPN7 881 aa8.81□□□□□ -1
CNGA1-202ENST00000402813 FOXD4L1Q9NU39 408 aa8.81□□□□□ -1
CNGA1-202ENST00000402813 IGSF3O75054 1194 aa8.78□□□□□ -1
CNGA1-202ENST00000402813 BRD2P25440 801 aaKnown RBP8.78□□□□□ -1
CNGA1-202ENST00000402813 PUS7Q96PZ0 661 aaKnown RBP8.74□□□□□ -1.01
CNGA1-202ENST00000402813 BBXQ8WY36 941 aaPredicted RBP8.73□□□□□ -1.01
CNGA1-202ENST00000402813 PPP4R3CPQ6ZMV5 832 aa8.73□□□□□ -1.01
CNGA1-202ENST00000402813 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.73□□□□□ -1.01
CNGA1-202ENST00000402813 PAXIP1Q6ZW49 1069 aaPredicted RBP8.71□□□□□ -1.02
CNGA1-202ENST00000402813 DNAJC5Q9H3Z4 198 aa8.71□□□□□ -1.02
CNGA1-202ENST00000402813 TAF7LQ5H9L4 462 aa8.69□□□□□ -1.02
CNGA1-202ENST00000402813 PDE4CQ08493 712 aa8.68□□□□□ -1.02
CNGA1-202ENST00000402813 TSHZ2Q9NRE2 1034 aa8.67□□□□□ -1.02
CNGA1-202ENST00000402813 FAM9AQ8IZU1 332 aaPredicted RBP8.67□□□□□ -1.02
CNGA1-202ENST00000402813 ZBTB7CA1YPR0 619 aa8.65□□□□□ -1.02
CNGA1-202ENST00000402813 CFAP44Q96MT7 982 aa8.64□□□□□ -1.03
CNGA1-202ENST00000402813 DHX37Q8IY37 1157 aaKnown RBP8.63□□□□□ -1.03
CNGA1-202ENST00000402813 NEFLP07196 543 aa8.61□□□□□ -1.03
CNGA1-202ENST00000402813 PKD2Q13563 968 aa8.58□□□□□ -1.04
CNGA1-202ENST00000402813 NPM1P06748 294 aaKnown RBP eCLIP8.57□□□□□ -1.04
CNGA1-202ENST00000402813 NECTIN2Q92692 538 aa8.57□□□□□ -1.04
CNGA1-202ENST00000402813 BRPF1P55201 1214 aaPredicted RBP8.53□□□□□ -1.04
CNGA1-202ENST00000402813 ZMYND15Q9H091 742 aa8.52□□□□□ -1.04
CNGA1-202ENST00000402813 RSPH6AQ9H0K4 717 aa8.52□□□□□ -1.05
CNGA1-202ENST00000402813 SPRYD3Q8NCJ5 442 aa8.51□□□□□ -1.05
CNGA1-202ENST00000402813 BCCIPQ9P287 314 aaKnown RBP eCLIP8.51□□□□□ -1.05
CNGA1-202ENST00000402813 TRHP20396 242 aaPredicted RBP8.47□□□□□ -1.05
CNGA1-202ENST00000402813 C1orf115Q9H7X2 142 aa8.46□□□□□ -1.06
CNGA1-202ENST00000402813 ARID3AQ99856 593 aa8.45□□□□□ -1.06
CNGA1-202ENST00000402813 RGS22Q8NE09 1264 aa8.45□□□□□ -1.06
CNGA1-202ENST00000402813 PKNOX2Q96KN3 472 aa8.44□□□□□ -1.06
CNGA1-202ENST00000402813 RSPH4AQ5TD94 716 aa8.42□□□□□ -1.06
CNGA1-202ENST00000402813 DNAJC5BQ9UF47 199 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms