RNA–Protein interactions for RNA: ENST00000402042.5

MKL1-203, Transcript of MKL/myocardin-like protein 1, humanhuman

TSL 1 (best) BASIC

Gene MKL1, Length 4,343 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKL1-203ENST00000402042 NISCHQ9Y2I1 1504 aa26.27■■□□□ 1.8
MKL1-203ENST00000402042 DCAF8L2P0C7V8 631 aa24.67■■□□□ 1.54
MKL1-203ENST00000402042 SHROOM4Q9ULL8 1493 aa23.81■■□□□ 1.4
MKL1-203ENST00000402042 SUPT5HO00267 1087 aaKnown RBP23.74■■□□□ 1.39
MKL1-203ENST00000402042 EHMT2Q96KQ7 1210 aa22.36■■□□□ 1.17
MKL1-203ENST00000402042 FAM9AQ8IZU1 332 aaPredicted RBP22.19■■□□□ 1.14
MKL1-203ENST00000402042 TRIM41Q8WV44 630 aa22.07■■□□□ 1.12
MKL1-203ENST00000402042 ABCC9O60706 1549 aa21.98■■□□□ 1.11
MKL1-203ENST00000402042 ZCCHC6Q5VYS8 1495 aaKnown RBP21.92■■□□□ 1.1
MKL1-203ENST00000402042 CHIC1Q5VXU3 224 aa21.89■■□□□ 1.1
MKL1-203ENST00000402042 CCDC180Q9P1Z9 1646 aa21.88■■□□□ 1.09
MKL1-203ENST00000402042 PCGF6Q9BYE7 350 aa21.87■■□□□ 1.09
MKL1-203ENST00000402042 APLP2Q06481 763 aa21.61■■□□□ 1.05
MKL1-203ENST00000402042 TTBK1Q5TCY1 1321 aaPredicted RBP21.55■■□□□ 1.04
MKL1-203ENST00000402042 LOC105371045A0A1W2PR82 267 aa21.55■■□□□ 1.04
MKL1-203ENST00000402042 UBTFP17480 764 aaKnown RBP21.48■■□□□ 1.03
MKL1-203ENST00000402042 PABPN1Q86U42 306 aaKnown RBP eCLIP21.46■■□□□ 1.03
MKL1-203ENST00000402042 RANGAP1P46060 587 aaPredicted RBP21.44■■□□□ 1.02
MKL1-203ENST00000402042 SCRIBQ14160 1630 aa21.34■■□□□ 1.01
MKL1-203ENST00000402042 PPARGC1BQ86YN6 1023 aaKnown RBP21.24■□□□□ 0.99
MKL1-203ENST00000402042 TRIM26Q12899 539 aaPredicted RBP21.24■□□□□ 0.99
MKL1-203ENST00000402042 ZEB1P37275 1124 aaPredicted RBP21.18■□□□□ 0.98
MKL1-203ENST00000402042 CCER1Q8TC90 406 aaPredicted RBP21.15■□□□□ 0.98
MKL1-203ENST00000402042 DCAF1Q9Y4B6 1507 aa21.08■□□□□ 0.96
MKL1-203ENST00000402042 HRCP23327 699 aa21.05■□□□□ 0.96
MKL1-203ENST00000402042 ATP1B4Q9UN42 357 aaPredicted RBP21.02■□□□□ 0.95
MKL1-203ENST00000402042 NACADO15069 1562 aa20.92■□□□□ 0.94
MKL1-203ENST00000402042 RSF1Q96T23 1441 aaPredicted RBP20.9■□□□□ 0.94
MKL1-203ENST00000402042 RB1CC1Q8TDY2 1594 aa20.89■□□□□ 0.94
MKL1-203ENST00000402042 CSRNP3Q8WYN3 585 aa20.69■□□□□ 0.9
MKL1-203ENST00000402042 MYO15BQ96JP2 1530 aa20.66■□□□□ 0.9
MKL1-203ENST00000402042 HNRNPUL2Q1KMD3 747 aaKnown RBP20.66■□□□□ 0.9
MKL1-203ENST00000402042 CECR2Q9BXF3 1484 aa20.61■□□□□ 0.89
MKL1-203ENST00000402042 ITGAEP38570 1179 aa20.58■□□□□ 0.89
MKL1-203ENST00000402042 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.57■□□□□ 0.88
MKL1-203ENST00000402042 CENPBP07199 599 aaPredicted RBP20.49■□□□□ 0.87
MKL1-203ENST00000402042 BAZ1AQ9NRL2 1556 aaPredicted RBP20.47■□□□□ 0.87
MKL1-203ENST00000402042 MROH2BQ7Z745 1585 aa20.38■□□□□ 0.85
MKL1-203ENST00000402042 PELP1Q8IZL8 1130 aaKnown RBP20.3■□□□□ 0.84
MKL1-203ENST00000402042 BAZ1BQ9UIG0 1483 aaKnown RBP20.27■□□□□ 0.84
MKL1-203ENST00000402042 YTHDC1Q96MU7 727 aaKnown RBP20.26■□□□□ 0.83
MKL1-203ENST00000402042 FAM50AQ14320 339 aaKnown RBP20.22■□□□□ 0.83
MKL1-203ENST00000402042 WRNQ14191 1432 aaPredicted RBP eCLIP20.22■□□□□ 0.83
MKL1-203ENST00000402042 P3H3Q8IVL6 736 aa20.18■□□□□ 0.82
MKL1-203ENST00000402042 EEA1Q15075 1411 aa20.17■□□□□ 0.82
MKL1-203ENST00000402042 DIEXFQ68CQ4 756 aaKnown RBP20.11■□□□□ 0.81
MKL1-203ENST00000402042 CCDC88BA6NC98 1476 aa20.1■□□□□ 0.81
MKL1-203ENST00000402042 WIZO95785 1651 aa20.1■□□□□ 0.81
MKL1-203ENST00000402042 CEP162Q5TB80 1403 aa20.06■□□□□ 0.8
MKL1-203ENST00000402042 CLIP1P30622 1438 aa20.04■□□□□ 0.8
MKL1-203ENST00000402042 GOLGA3Q08378 1498 aa20.04■□□□□ 0.8
MKL1-203ENST00000402042 FBLN2P98095 1184 aa20.02■□□□□ 0.8
MKL1-203ENST00000402042 TNIKQ9UKE5 1360 aa19.99■□□□□ 0.79
MKL1-203ENST00000402042 TOP2AP11388 1531 aaKnown RBP19.97■□□□□ 0.79
MKL1-203ENST00000402042 SOGA1O94964 1423 aa19.97■□□□□ 0.79
MKL1-203ENST00000402042 ABCC8Q09428 1581 aa19.95■□□□□ 0.78
MKL1-203ENST00000402042 NEUROD1Q13562 356 aa19.93■□□□□ 0.78
MKL1-203ENST00000402042 CEP164Q9UPV0 1460 aa19.92■□□□□ 0.78
MKL1-203ENST00000402042 SMARCA2P51531 1590 aa19.91■□□□□ 0.78
MKL1-203ENST00000402042 SMARCA4P51532 1647 aa19.89■□□□□ 0.78
MKL1-203ENST00000402042 ARID3CA6NKF2 412 aa19.89■□□□□ 0.78
MKL1-203ENST00000402042 TRIM52Q96A61 297 aa19.89■□□□□ 0.77
MKL1-203ENST00000402042 KIF27Q86VH2 1401 aa19.89■□□□□ 0.77
MKL1-203ENST00000402042 ZNF316A6NFI3 1004 aaPredicted RBP19.87■□□□□ 0.77
MKL1-203ENST00000402042 MYT1LQ9UL68 1186 aa19.85■□□□□ 0.77
MKL1-203ENST00000402042 NEFLP07196 543 aa19.81■□□□□ 0.76
MKL1-203ENST00000402042 ATAD2BQ9ULI0 1458 aa19.81■□□□□ 0.76
MKL1-203ENST00000402042 POLR3GLQ9BT43 218 aa19.79■□□□□ 0.76
MKL1-203ENST00000402042 CDK11AQ9UQ88 783 aaPredicted RBP19.7■□□□□ 0.74
MKL1-203ENST00000402042 CUX2O14529 1486 aa19.65■□□□□ 0.74
MKL1-203ENST00000402042 CNGB1Q14028 1251 aaPredicted RBP19.64■□□□□ 0.73
MKL1-203ENST00000402042 MTUS2Q5JR59 1369 aa19.63■□□□□ 0.73
MKL1-203ENST00000402042 ZNF777Q9ULD5 760 aaPredicted RBP19.61■□□□□ 0.73
MKL1-203ENST00000402042 CARMIL1Q5VZK9 1371 aa19.6■□□□□ 0.73
MKL1-203ENST00000402042 CHMP7Q8WUX9 453 aaPredicted RBP19.57■□□□□ 0.72
MKL1-203ENST00000402042 RUSC2Q8N2Y8 1516 aa19.55■□□□□ 0.72
MKL1-203ENST00000402042 CADPSQ9ULU8 1353 aa19.55■□□□□ 0.72
MKL1-203ENST00000402042 VPS8Q8N3P4 1428 aa19.55■□□□□ 0.72
MKL1-203ENST00000402042 ZNF326Q5BKZ1 582 aaKnown RBP19.53■□□□□ 0.72
MKL1-203ENST00000402042 CHIC2Q9UKJ5 165 aa19.52■□□□□ 0.72
MKL1-203ENST00000402042 ANP32CO43423 234 aa19.49■□□□□ 0.71
MKL1-203ENST00000402042 GTF3C3Q9Y5Q9 886 aa19.48■□□□□ 0.71
MKL1-203ENST00000402042 TONSLQ96HA7 1378 aa19.48■□□□□ 0.71
MKL1-203ENST00000402042 RAPGEF2Q9Y4G8 1499 aa19.44■□□□□ 0.7
MKL1-203ENST00000402042 ACIN1Q9UKV3 1341 aaKnown RBP19.44■□□□□ 0.7
MKL1-203ENST00000402042 FHAD1B1AJZ9 1412 aa19.41■□□□□ 0.7
MKL1-203ENST00000402042 NCAPD3P42695 1498 aa19.4■□□□□ 0.7
MKL1-203ENST00000402042 PDS5BQ9NTI5 1447 aa19.4■□□□□ 0.7
MKL1-203ENST00000402042 KANK4Q5T7N3 995 aaPredicted RBP19.39■□□□□ 0.69
MKL1-203ENST00000402042 TDRD9Q8NDG6 1382 aaKnown RBP19.37■□□□□ 0.69
MKL1-203ENST00000402042 CCNB3Q8WWL7 1395 aa19.37■□□□□ 0.69
MKL1-203ENST00000402042 EIF4G1Q04637 1599 aaKnown RBP19.35■□□□□ 0.69
MKL1-203ENST00000402042 RRP7BPQ9NSQ0 103 aa19.35■□□□□ 0.69
MKL1-203ENST00000402042 ERCC6Q03468 1493 aa19.34■□□□□ 0.69
MKL1-203ENST00000402042 ERICH6Q7L0X2 663 aa19.34■□□□□ 0.69
MKL1-203ENST00000402042 DDX10Q13206 875 aaKnown RBP19.32■□□□□ 0.68
MKL1-203ENST00000402042 TSPY4P0CV99 314 aa19.28■□□□□ 0.68
MKL1-203ENST00000402042 TSPY10P0CW01 314 aa19.28■□□□□ 0.68
MKL1-203ENST00000402042 FANCD2Q9BXW9 1451 aa19.28■□□□□ 0.68
MKL1-203ENST00000402042 MIER1Q8N108 512 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms