RNA–Protein interactions for RNA: ENST00000400866.4

ATRX-203, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-203ENST00000400866 AEBP2Q6ZN18 517 aaPredicted RBP31.16■■■□□ 2.58
ATRX-203ENST00000400866 CHIC1Q5VXU3 224 aa29.36■■■□□ 2.29
ATRX-203ENST00000400866 SENP3Q9H4L4 574 aaPredicted RBP26.85■■□□□ 1.89
ATRX-203ENST00000400866 PHF23Q9BUL5 403 aaPredicted RBP26.37■■□□□ 1.81
ATRX-203ENST00000400866 FOXD1Q16676 465 aa24.97■■□□□ 1.59
ATRX-203ENST00000400866 POTEDQ86YR6 584 aa24.03■■□□□ 1.44
ATRX-203ENST00000400866 MSH5O43196 834 aa23.74■■□□□ 1.39
ATRX-203ENST00000400866 PLPPR3Q6T4P5 718 aa23.38■■□□□ 1.33
ATRX-203ENST00000400866 PIAS4Q8N2W9 510 aaPredicted RBP23.3■■□□□ 1.32
ATRX-203ENST00000400866 PPP6R1Q9UPN7 881 aa22.96■■□□□ 1.27
ATRX-203ENST00000400866 ADRA2BP18089 450 aa22.92■■□□□ 1.26
ATRX-203ENST00000400866 SCAF1Q9H7N4 1312 aaKnown RBP21.22■□□□□ 0.99
ATRX-203ENST00000400866 DMRT2Q9Y5R5 561 aa21.18■□□□□ 0.98
ATRX-203ENST00000400866 MAPK8IP2Q13387 824 aaPredicted RBP21.13■□□□□ 0.97
ATRX-203ENST00000400866 CACNB1Q02641 598 aaPredicted RBP20.67■□□□□ 0.9
ATRX-203ENST00000400866 DCAF8L1A6NGE4 600 aa20.39■□□□□ 0.85
ATRX-203ENST00000400866 PPP4R3CPQ6ZMV5 832 aa20.38■□□□□ 0.85
ATRX-203ENST00000400866 HOXD11P31277 338 aaPredicted RBP20.24■□□□□ 0.83
ATRX-203ENST00000400866 CNKSR2Q8WXI2 1034 aa20.14■□□□□ 0.81
ATRX-203ENST00000400866 RNF39Q9H2S5 420 aa20.12■□□□□ 0.81
ATRX-203ENST00000400866 RNF216Q9NWF9 866 aaPredicted RBP20.04■□□□□ 0.8
ATRX-203ENST00000400866 C1QBPQ07021 282 aaKnown RBP19.89■□□□□ 0.77
ATRX-203ENST00000400866 DNAJC5BQ9UF47 199 aa19.71■□□□□ 0.75
ATRX-203ENST00000400866 NCBP3Q53F19 620 aaKnown RBP19.62■□□□□ 0.73
ATRX-203ENST00000400866 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.37■□□□□ 0.695e-6■■□□□ 13.8
ATRX-203ENST00000400866 NPM3O75607 178 aaKnown RBP19.16■□□□□ 0.66
ATRX-203ENST00000400866 U3KPZ7 1027 aaPredicted RBP18.81■□□□□ 0.6
ATRX-203ENST00000400866 POTEHQ6S545 545 aa18.76■□□□□ 0.59
ATRX-203ENST00000400866 CAPN15O75808 1086 aa18.73■□□□□ 0.59
ATRX-203ENST00000400866 DSG3P32926 999 aa18.63■□□□□ 0.57
ATRX-203ENST00000400866 SPINK5Q9NQ38 1064 aaPredicted RBP18.62■□□□□ 0.57
ATRX-203ENST00000400866 APLP2Q06481 763 aa18.51■□□□□ 0.55
ATRX-203ENST00000400866 KCNA4P22459 653 aa18.43■□□□□ 0.54
ATRX-203ENST00000400866 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.36■□□□□ 0.53
ATRX-203ENST00000400866 HNRNPUL2Q1KMD3 747 aaKnown RBP18.36■□□□□ 0.53
ATRX-203ENST00000400866 SLC4A2P04920 1241 aa18.34■□□□□ 0.53
ATRX-203ENST00000400866 ZNF219Q9P2Y4 722 aaPredicted RBP18.34■□□□□ 0.53
ATRX-203ENST00000400866 TRHP20396 242 aaPredicted RBP18.32■□□□□ 0.52
ATRX-203ENST00000400866 ABCB7O75027 752 aa18.18■□□□□ 0.5
ATRX-203ENST00000400866 SAMD1Q6SPF0 538 aaPredicted RBP18.18■□□□□ 0.5
ATRX-203ENST00000400866 RBM42Q9BTD8 480 aaKnown RBP17.95■□□□□ 0.46
ATRX-203ENST00000400866 MYCNP04198 464 aaPredicted RBP17.83■□□□□ 0.44
ATRX-203ENST00000400866 POLA2Q14181 598 aa17.73■□□□□ 0.43
ATRX-203ENST00000400866 CHRDL2Q6WN34 429 aa17.66■□□□□ 0.42
ATRX-203ENST00000400866 ZBTB12Q9Y330 459 aaPredicted RBP17.48■□□□□ 0.39
ATRX-203ENST00000400866 SLC4A1APQ9BWU0 796 aaKnown RBP17.42■□□□□ 0.38
ATRX-203ENST00000400866 FOXD4L1Q9NU39 408 aa17.41■□□□□ 0.38
ATRX-203ENST00000400866 AKT1S1Q96B36 256 aa17.39■□□□□ 0.37
ATRX-203ENST00000400866 SP7Q8TDD2 431 aaPredicted RBP17.33■□□□□ 0.36
ATRX-203ENST00000400866 EHMT2Q96KQ7 1210 aa17.28■□□□□ 0.36
ATRX-203ENST00000400866 ATF5Q9Y2D1 282 aaPredicted RBP17.27■□□□□ 0.36
ATRX-203ENST00000400866 REM2Q8IYK8 340 aaPredicted RBP17.17■□□□□ 0.34
ATRX-203ENST00000400866 OSCARQ8IYS5 282 aa17.14■□□□□ 0.33
ATRX-203ENST00000400866 PIP4P2Q8N4L2 257 aa17.08■□□□□ 0.32
ATRX-203ENST00000400866 HAX1O00165 279 aa16.98■□□□□ 0.31
ATRX-203ENST00000400866 ATXN8OSP0DMR3 200 aa16.98■□□□□ 0.31
ATRX-203ENST00000400866 PITPNM1O00562 1244 aa16.96■□□□□ 0.31
ATRX-203ENST00000400866 FXR2P51116 673 aaKnown RBP eCLIP16.92■□□□□ 0.32e-7■□□□□ 9.9
ATRX-203ENST00000400866 FBLN2P98095 1184 aa16.87■□□□□ 0.29
ATRX-203ENST00000400866 ZBTB22O15209 634 aa16.85■□□□□ 0.29
ATRX-203ENST00000400866 SPDYE2BA6NHP3 402 aa16.83■□□□□ 0.28
ATRX-203ENST00000400866 SPDYE6P0CI01 402 aa16.83■□□□□ 0.28
ATRX-203ENST00000400866 SPDYE2Q495Y8 402 aa16.83■□□□□ 0.28
ATRX-203ENST00000400866 CSRNP3Q8WYN3 585 aa16.83■□□□□ 0.28
ATRX-203ENST00000400866 SPDYE1Q8NFV5 336 aaPredicted RBP16.65■□□□□ 0.26
ATRX-203ENST00000400866 CLEC11AQ9Y240 323 aa16.61■□□□□ 0.25
ATRX-203ENST00000400866 EVX2Q03828 476 aa16.58■□□□□ 0.24
ATRX-203ENST00000400866 PRKAR2AP13861 404 aaKnown RBP16.57■□□□□ 0.24
ATRX-203ENST00000400866 ZNF692Q9BU19 519 aaPredicted RBP16.56■□□□□ 0.24
ATRX-203ENST00000400866 SSUH2Q9Y2M2 353 aa16.48■□□□□ 0.23
ATRX-203ENST00000400866 MKRN4PQ13434 485 aaPredicted RBP16.47■□□□□ 0.23
ATRX-203ENST00000400866 C19orf67A6NJJ6 358 aa16.4■□□□□ 0.22
ATRX-203ENST00000400866 PRR29P0C7W0 189 aa16.31■□□□□ 0.2
ATRX-203ENST00000400866 GABBR2O75899 941 aa16.29■□□□□ 0.2
ATRX-203ENST00000400866 PABPN1Q86U42 306 aaKnown RBP eCLIP16.26■□□□□ 0.19
ATRX-203ENST00000400866 LHX8Q68G74 356 aa16.24■□□□□ 0.19
ATRX-203ENST00000400866 CHADLQ6NUI6 762 aa16.23■□□□□ 0.19
ATRX-203ENST00000400866 CLCN6P51797 869 aa16.05■□□□□ 0.16
ATRX-203ENST00000400866 CD44P16070 742 aaKnown RBP16.03■□□□□ 0.16
ATRX-203ENST00000400866 FARP1Q9Y4F1 1045 aaPredicted RBP16.02■□□□□ 0.16
ATRX-203ENST00000400866 STAG3Q9UJ98 1225 aa15.87■□□□□ 0.13
ATRX-203ENST00000400866 POTEIP0CG38 1075 aa15.85■□□□□ 0.13
ATRX-203ENST00000400866 DCBLD2Q96PD2 775 aa15.82■□□□□ 0.12
ATRX-203ENST00000400866 ZNF579Q8NAF0 562 aaKnown RBP15.75■□□□□ 0.11
ATRX-203ENST00000400866 ZRANB1Q9UGI0 708 aa15.75■□□□□ 0.11
ATRX-203ENST00000400866 CREBZFQ9NS37 354 aa15.7■□□□□ 0.1
ATRX-203ENST00000400866 PAK3O75914 559 aaPredicted RBP15.67■□□□□ 0.1
ATRX-203ENST00000400866 PLSCR2Q9NRY7 297 aa15.65■□□□□ 0.1
ATRX-203ENST00000400866 SPDYE4A6NLX3 237 aa15.63■□□□□ 0.09
ATRX-203ENST00000400866 NPM1P06748 294 aaKnown RBP eCLIP15.58■□□□□ 0.08
ATRX-203ENST00000400866 GALR2O43603 387 aaPredicted RBP15.52■□□□□ 0.08
ATRX-203ENST00000400866 OTUD5Q96G74 571 aa15.43■□□□□ 0.06
ATRX-203ENST00000400866 PHF12Q96QT6 1004 aa15.42■□□□□ 0.06
ATRX-203ENST00000400866 MNX1P50219 401 aaPredicted RBP15.34■□□□□ 0.05
ATRX-203ENST00000400866 POTEMA6NI47 508 aa15.3■□□□□ 0.04
ATRX-203ENST00000400866 POTEB2H3BUK9 544 aa15.3■□□□□ 0.04
ATRX-203ENST00000400866 PCDH10Q9P2E7 1040 aa15.27■□□□□ 0.04
ATRX-203ENST00000400866 POTEGQ6S5H5 508 aa15.24■□□□□ 0.03
ATRX-203ENST00000400866 SLC39A7Q92504 469 aa15.24■□□□□ 0.03
ATRX-203ENST00000400866 FKBP8Q14318 412 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms