RNA–Protein interactions for RNA: ENST00000398469.5

KRT42P-201, Transcript of keratin 42 pseudogene, humanhuman

TSL 2 BASIC

Gene KRT42P, Length 2,864 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT42P-201ENST00000398469 NISCHQ9Y2I1 1504 aa26.84■■□□□ 1.89
KRT42P-201ENST00000398469 SHROOM4Q9ULL8 1493 aa23.57■■□□□ 1.36
KRT42P-201ENST00000398469 SUPT5HO00267 1087 aaKnown RBP23.11■■□□□ 1.29
KRT42P-201ENST00000398469 DCAF8L2P0C7V8 631 aa22.92■■□□□ 1.26
KRT42P-201ENST00000398469 ZCCHC6Q5VYS8 1495 aaKnown RBP22.66■■□□□ 1.22
KRT42P-201ENST00000398469 CCDC180Q9P1Z9 1646 aa22.47■■□□□ 1.19
KRT42P-201ENST00000398469 MYO15BQ96JP2 1530 aa22.26■■□□□ 1.15
KRT42P-201ENST00000398469 CHIC1Q5VXU3 224 aa22.25■■□□□ 1.15
KRT42P-201ENST00000398469 LOC105371045A0A1W2PR82 267 aa21.87■■□□□ 1.09
KRT42P-201ENST00000398469 PCGF6Q9BYE7 350 aa21.85■■□□□ 1.09
KRT42P-201ENST00000398469 DCAF1Q9Y4B6 1507 aa21.7■■□□□ 1.06
KRT42P-201ENST00000398469 HRCP23327 699 aa21.64■■□□□ 1.05
KRT42P-201ENST00000398469 PPARGC1BQ86YN6 1023 aaKnown RBP21.59■■□□□ 1.05
KRT42P-201ENST00000398469 SCRIBQ14160 1630 aa21.58■■□□□ 1.04
KRT42P-201ENST00000398469 EHMT2Q96KQ7 1210 aa21.54■■□□□ 1.04
KRT42P-201ENST00000398469 FAM9AQ8IZU1 332 aaPredicted RBP21.46■■□□□ 1.03
KRT42P-201ENST00000398469 RSF1Q96T23 1441 aaPredicted RBP21.4■■□□□ 1.02
KRT42P-201ENST00000398469 ABCC9O60706 1549 aa21.39■■□□□ 1.01
KRT42P-201ENST00000398469 TRIM41Q8WV44 630 aa21.3■■□□□ 1
KRT42P-201ENST00000398469 RB1CC1Q8TDY2 1594 aa21.24■□□□□ 0.99
KRT42P-201ENST00000398469 CECR2Q9BXF3 1484 aa21.2■□□□□ 0.98
KRT42P-201ENST00000398469 SLC24A1O60721 1099 aa21.11■□□□□ 0.97
KRT42P-201ENST00000398469 TRIM26Q12899 539 aaPredicted RBP21.11■□□□□ 0.97
KRT42P-201ENST00000398469 MROH2BQ7Z745 1585 aa21.03■□□□□ 0.96
KRT42P-201ENST00000398469 WIZO95785 1651 aa20.93■□□□□ 0.94
KRT42P-201ENST00000398469 NACADO15069 1562 aa20.87■□□□□ 0.93
KRT42P-201ENST00000398469 TTBK1Q5TCY1 1321 aaPredicted RBP20.8■□□□□ 0.92
KRT42P-201ENST00000398469 PABPN1Q86U42 306 aaKnown RBP eCLIP20.68■□□□□ 0.9
KRT42P-201ENST00000398469 ABCC8Q09428 1581 aa20.61■□□□□ 0.89
KRT42P-201ENST00000398469 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.57■□□□□ 0.88
KRT42P-201ENST00000398469 BAZ1AQ9NRL2 1556 aaPredicted RBP20.56■□□□□ 0.88
KRT42P-201ENST00000398469 CCDC88BA6NC98 1476 aa20.52■□□□□ 0.88
KRT42P-201ENST00000398469 ZEB1P37275 1124 aaPredicted RBP20.46■□□□□ 0.87
KRT42P-201ENST00000398469 SOGA1O94964 1423 aa20.45■□□□□ 0.86
KRT42P-201ENST00000398469 EIF4G1Q04637 1599 aaKnown RBP20.44■□□□□ 0.86
KRT42P-201ENST00000398469 SMARCA4P51532 1647 aa20.4■□□□□ 0.86
KRT42P-201ENST00000398469 RUSC2Q8N2Y8 1516 aa20.4■□□□□ 0.86
KRT42P-201ENST00000398469 CCER1Q8TC90 406 aaPredicted RBP20.38■□□□□ 0.85
KRT42P-201ENST00000398469 UNC13AQ9UPW8 1703 aa20.38■□□□□ 0.85
KRT42P-201ENST00000398469 TOP2AP11388 1531 aaKnown RBP20.38■□□□□ 0.85
KRT42P-201ENST00000398469 SMARCA2P51531 1590 aa20.36■□□□□ 0.85
KRT42P-201ENST00000398469 UBTFP17480 764 aaKnown RBP20.36■□□□□ 0.85
KRT42P-201ENST00000398469 RANGAP1P46060 587 aaPredicted RBP20.3■□□□□ 0.84
KRT42P-201ENST00000398469 CEP162Q5TB80 1403 aa20.26■□□□□ 0.83
KRT42P-201ENST00000398469 CSRNP3Q8WYN3 585 aa20.24■□□□□ 0.83
KRT42P-201ENST00000398469 BICRAQ9NZM4 1560 aa20.16■□□□□ 0.82
KRT42P-201ENST00000398469 SCAF1Q9H7N4 1312 aaKnown RBP20.15■□□□□ 0.82
KRT42P-201ENST00000398469 TNIKQ9UKE5 1360 aa20.09■□□□□ 0.81
KRT42P-201ENST00000398469 WRNQ14191 1432 aaPredicted RBP eCLIP20.08■□□□□ 0.81
KRT42P-201ENST00000398469 HNRNPUL2Q1KMD3 747 aaKnown RBP20.06■□□□□ 0.8
KRT42P-201ENST00000398469 SYNJ1O43426 1573 aa20■□□□□ 0.79
KRT42P-201ENST00000398469 DIEXFQ68CQ4 756 aaKnown RBP19.97■□□□□ 0.79
KRT42P-201ENST00000398469 GOLGA3Q08378 1498 aa19.96■□□□□ 0.79
KRT42P-201ENST00000398469 ATAD2BQ9ULI0 1458 aa19.94■□□□□ 0.78
KRT42P-201ENST00000398469 NEUROD1Q13562 356 aa19.92■□□□□ 0.78
KRT42P-201ENST00000398469 BAZ1BQ9UIG0 1483 aaKnown RBP19.91■□□□□ 0.78
KRT42P-201ENST00000398469 EEA1Q15075 1411 aa19.9■□□□□ 0.78
KRT42P-201ENST00000398469 RAPGEF2Q9Y4G8 1499 aa19.87■□□□□ 0.77
KRT42P-201ENST00000398469 CLIP1P30622 1438 aa19.86■□□□□ 0.77
KRT42P-201ENST00000398469 CEP164Q9UPV0 1460 aa19.81■□□□□ 0.76
KRT42P-201ENST00000398469 PEG3Q9GZU2 1588 aa19.81■□□□□ 0.76
KRT42P-201ENST00000398469 YTHDC1Q96MU7 727 aaKnown RBP19.79■□□□□ 0.76
KRT42P-201ENST00000398469 ACIN1Q9UKV3 1341 aaKnown RBP19.78■□□□□ 0.76
KRT42P-201ENST00000398469 APLP2Q06481 763 aa19.77■□□□□ 0.76
KRT42P-201ENST00000398469 ZNF316A6NFI3 1004 aaPredicted RBP19.71■□□□□ 0.75
KRT42P-201ENST00000398469 GTF3C3Q9Y5Q9 886 aa19.7■□□□□ 0.74
KRT42P-201ENST00000398469 VPS8Q8N3P4 1428 aa19.69■□□□□ 0.74
KRT42P-201ENST00000398469 KIF21BO75037 1637 aa19.67■□□□□ 0.74
KRT42P-201ENST00000398469 KANK4Q5T7N3 995 aaPredicted RBP19.67■□□□□ 0.74
KRT42P-201ENST00000398469 MIER1Q8N108 512 aa19.62■□□□□ 0.73
KRT42P-201ENST00000398469 ITGAEP38570 1179 aa19.61■□□□□ 0.73
KRT42P-201ENST00000398469 TOP2BQ02880 1626 aa19.57■□□□□ 0.72
KRT42P-201ENST00000398469 PLPPR3Q6T4P5 718 aa19.57■□□□□ 0.72
KRT42P-201ENST00000398469 CENPBP07199 599 aaPredicted RBP19.55■□□□□ 0.72
KRT42P-201ENST00000398469 CUX1P39880 1505 aa19.53■□□□□ 0.72
KRT42P-201ENST00000398469 ARAP1Q96P48 1450 aa19.5■□□□□ 0.71
KRT42P-201ENST00000398469 PRXQ9BXM0 1461 aa19.47■□□□□ 0.71
KRT42P-201ENST00000398469 P3H3Q8IVL6 736 aa19.43■□□□□ 0.7
KRT42P-201ENST00000398469 BIVM-ERCC5R4GMW8 1640 aa19.43■□□□□ 0.7
KRT42P-201ENST00000398469 NCAPD3P42695 1498 aa19.42■□□□□ 0.7
KRT42P-201ENST00000398469 KIF27Q86VH2 1401 aa19.4■□□□□ 0.7
KRT42P-201ENST00000398469 ATP1B4Q9UN42 357 aaPredicted RBP19.38■□□□□ 0.69
KRT42P-201ENST00000398469 DHX57Q6P158 1386 aaKnown RBP19.38■□□□□ 0.69
KRT42P-201ENST00000398469 CFTRP13569 1480 aa19.34■□□□□ 0.69
KRT42P-201ENST00000398469 CUX2O14529 1486 aa19.33■□□□□ 0.69
KRT42P-201ENST00000398469 ARHGAP35Q9NRY4 1499 aa19.33■□□□□ 0.68
KRT42P-201ENST00000398469 ERICH3Q5RHP9 1530 aa19.32■□□□□ 0.68
KRT42P-201ENST00000398469 HMGXB3Q12766 1538 aa19.31■□□□□ 0.68
KRT42P-201ENST00000398469 IGF1RP08069 1367 aa19.28■□□□□ 0.68
KRT42P-201ENST00000398469 PELP1Q8IZL8 1130 aaKnown RBP19.26■□□□□ 0.67
KRT42P-201ENST00000398469 RTN4Q9NQC3 1192 aaKnown RBP19.24■□□□□ 0.67
KRT42P-201ENST00000398469 CCNB3Q8WWL7 1395 aa19.23■□□□□ 0.67
KRT42P-201ENST00000398469 FAM50AQ14320 339 aaKnown RBP19.22■□□□□ 0.67
KRT42P-201ENST00000398469 CARMIL1Q5VZK9 1371 aa19.2■□□□□ 0.66
KRT42P-201ENST00000398469 FGD5Q6ZNL6 1462 aa19.19■□□□□ 0.66
KRT42P-201ENST00000398469 CADPSQ9ULU8 1353 aa19.19■□□□□ 0.66
KRT42P-201ENST00000398469 RRBP1Q9P2E9 1410 aaKnown RBP19.19■□□□□ 0.66
KRT42P-201ENST00000398469 KCNH8Q96L42 1107 aa19.17■□□□□ 0.66
KRT42P-201ENST00000398469 SIN3AQ96ST3 1273 aa19.17■□□□□ 0.66
KRT42P-201ENST00000398469 RAB3GAP2Q9H2M9 1393 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms