RNA–Protein interactions for RNA: ENST00000397387.2

ARF4P3-201, Transcript of ADP ribosylation factor 4 pseudogene 3, humanhuman

BASIC

Gene ARF4P3, Length 509 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4P3-201ENST00000397387 AEBP2Q6ZN18 517 aaPredicted RBP19.19■□□□□ 0.66
ARF4P3-201ENST00000397387 CHIC1Q5VXU3 224 aa18.01■□□□□ 0.47
ARF4P3-201ENST00000397387 SENP3Q9H4L4 574 aaPredicted RBP16.52■□□□□ 0.24
ARF4P3-201ENST00000397387 PHF23Q9BUL5 403 aaPredicted RBP16.25■□□□□ 0.19
ARF4P3-201ENST00000397387 FOXD1Q16676 465 aa15.45■□□□□ 0.06
ARF4P3-201ENST00000397387 POTEDQ86YR6 584 aa15.39■□□□□ 0.05
ARF4P3-201ENST00000397387 MSH5O43196 834 aa14.72□□□□□ -0.05
ARF4P3-201ENST00000397387 PIAS4Q8N2W9 510 aaPredicted RBP14.35□□□□□ -0.11
ARF4P3-201ENST00000397387 PPP6R1Q9UPN7 881 aa13.98□□□□□ -0.17
ARF4P3-201ENST00000397387 ADRA2BP18089 450 aa13.96□□□□□ -0.17
ARF4P3-201ENST00000397387 PLPPR3Q6T4P5 718 aa13.87□□□□□ -0.19
ARF4P3-201ENST00000397387 CACNB1Q02641 598 aaPredicted RBP13.1□□□□□ -0.31
ARF4P3-201ENST00000397387 MAPK8IP2Q13387 824 aaPredicted RBP13.01□□□□□ -0.33
ARF4P3-201ENST00000397387 DMRT2Q9Y5R5 561 aa12.97□□□□□ -0.33
ARF4P3-201ENST00000397387 SCAF1Q9H7N4 1312 aaKnown RBP12.82□□□□□ -0.36
ARF4P3-201ENST00000397387 DCAF8L1A6NGE4 600 aa12.68□□□□□ -0.38
ARF4P3-201ENST00000397387 RNF39Q9H2S5 420 aa12.46□□□□□ -0.41
ARF4P3-201ENST00000397387 C1QBPQ07021 282 aaKnown RBP12.28□□□□□ -0.44
ARF4P3-201ENST00000397387 HOXD11P31277 338 aaPredicted RBP12.23□□□□□ -0.45
ARF4P3-201ENST00000397387 PPP4R3CPQ6ZMV5 832 aa12.1□□□□□ -0.47
ARF4P3-201ENST00000397387 RNF216Q9NWF9 866 aaPredicted RBP12.01□□□□□ -0.49
ARF4P3-201ENST00000397387 CNKSR2Q8WXI2 1034 aa11.99□□□□□ -0.49
ARF4P3-201ENST00000397387 POTEHQ6S545 545 aa11.97□□□□□ -0.49
ARF4P3-201ENST00000397387 DNAJC5BQ9UF47 199 aa11.87□□□□□ -0.51
ARF4P3-201ENST00000397387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.82□□□□□ -0.52
ARF4P3-201ENST00000397387 KCNA4P22459 653 aa11.77□□□□□ -0.53
ARF4P3-201ENST00000397387 CAPN15O75808 1086 aa11.53□□□□□ -0.56
ARF4P3-201ENST00000397387 EHMT2Q96KQ7 1210 aa11.53□□□□□ -0.56
ARF4P3-201ENST00000397387 DSG3P32926 999 aa11.49□□□□□ -0.57
ARF4P3-201ENST00000397387 NCBP3Q53F19 620 aaKnown RBP11.49□□□□□ -0.57
ARF4P3-201ENST00000397387 SPINK5Q9NQ38 1064 aaPredicted RBP11.43□□□□□ -0.58
ARF4P3-201ENST00000397387 U3KPZ7 1027 aaPredicted RBP11.37□□□□□ -0.59
ARF4P3-201ENST00000397387 SLC4A1APQ9BWU0 796 aaKnown RBP11.35□□□□□ -0.59
ARF4P3-201ENST00000397387 NPM3O75607 178 aaKnown RBP11.25□□□□□ -0.61
ARF4P3-201ENST00000397387 TRHP20396 242 aaPredicted RBP11.21□□□□□ -0.61
ARF4P3-201ENST00000397387 ABCB7O75027 752 aa11.19□□□□□ -0.62
ARF4P3-201ENST00000397387 CSRNP3Q8WYN3 585 aa11.13□□□□□ -0.63
ARF4P3-201ENST00000397387 APLP2Q06481 763 aa11.08□□□□□ -0.64
ARF4P3-201ENST00000397387 ZNF219Q9P2Y4 722 aaPredicted RBP11.08□□□□□ -0.64
ARF4P3-201ENST00000397387 RBM42Q9BTD8 480 aaKnown RBP11.02□□□□□ -0.65
ARF4P3-201ENST00000397387 CHRDL2Q6WN34 429 aa11.01□□□□□ -0.65
ARF4P3-201ENST00000397387 SP7Q8TDD2 431 aaPredicted RBP10.93□□□□□ -0.66
ARF4P3-201ENST00000397387 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.9□□□□□ -0.66
ARF4P3-201ENST00000397387 HNRNPUL2Q1KMD3 747 aaKnown RBP10.9□□□□□ -0.66
ARF4P3-201ENST00000397387 SLC4A2P04920 1241 aa10.87□□□□□ -0.67
ARF4P3-201ENST00000397387 SAMD1Q6SPF0 538 aaPredicted RBP10.8□□□□□ -0.68
ARF4P3-201ENST00000397387 ZBTB22O15209 634 aa10.78□□□□□ -0.68
ARF4P3-201ENST00000397387 FOXD4L1Q9NU39 408 aa10.74□□□□□ -0.69
ARF4P3-201ENST00000397387 POLA2Q14181 598 aa10.72□□□□□ -0.69
ARF4P3-201ENST00000397387 HAX1O00165 279 aa10.69□□□□□ -0.7
ARF4P3-201ENST00000397387 AKT1S1Q96B36 256 aa10.62□□□□□ -0.71
ARF4P3-201ENST00000397387 PIP4P2Q8N4L2 257 aa10.61□□□□□ -0.71
ARF4P3-201ENST00000397387 REM2Q8IYK8 340 aaPredicted RBP10.54□□□□□ -0.72
ARF4P3-201ENST00000397387 MYCNP04198 464 aaPredicted RBP10.43□□□□□ -0.74
ARF4P3-201ENST00000397387 ZBTB12Q9Y330 459 aaPredicted RBP10.42□□□□□ -0.74
ARF4P3-201ENST00000397387 PITPNM1O00562 1244 aa10.41□□□□□ -0.74
ARF4P3-201ENST00000397387 FXR2P51116 673 aaKnown RBP eCLIP10.41□□□□□ -0.74
ARF4P3-201ENST00000397387 EVX2Q03828 476 aa10.4□□□□□ -0.74
ARF4P3-201ENST00000397387 OSCARQ8IYS5 282 aa10.36□□□□□ -0.75
ARF4P3-201ENST00000397387 ATXN8OSP0DMR3 200 aa10.34□□□□□ -0.75
ARF4P3-201ENST00000397387 LHX8Q68G74 356 aa10.28□□□□□ -0.76
ARF4P3-201ENST00000397387 PLSCR2Q9NRY7 297 aa10.25□□□□□ -0.77
ARF4P3-201ENST00000397387 ATF5Q9Y2D1 282 aaPredicted RBP10.23□□□□□ -0.77
ARF4P3-201ENST00000397387 PRKAR2AP13861 404 aaKnown RBP10.19□□□□□ -0.78
ARF4P3-201ENST00000397387 GABBR2O75899 941 aa10.16□□□□□ -0.78
ARF4P3-201ENST00000397387 CLEC11AQ9Y240 323 aa10.15□□□□□ -0.78
ARF4P3-201ENST00000397387 C19orf67A6NJJ6 358 aa10.11□□□□□ -0.79
ARF4P3-201ENST00000397387 FKBP8Q14318 412 aa10.1□□□□□ -0.79
ARF4P3-201ENST00000397387 SPDYE1Q8NFV5 336 aaPredicted RBP10.05□□□□□ -0.8
ARF4P3-201ENST00000397387 SPDYE2BA6NHP3 402 aa10.03□□□□□ -0.8
ARF4P3-201ENST00000397387 SPDYE6P0CI01 402 aa10.03□□□□□ -0.8
ARF4P3-201ENST00000397387 SPDYE2Q495Y8 402 aa10.03□□□□□ -0.8
ARF4P3-201ENST00000397387 AMER1Q5JTC6 1135 aaPredicted RBP9.98□□□□□ -0.81
ARF4P3-201ENST00000397387 FBLN2P98095 1184 aa9.97□□□□□ -0.81
ARF4P3-201ENST00000397387 CHADLQ6NUI6 762 aa9.96□□□□□ -0.82
ARF4P3-201ENST00000397387 RTN4Q9NQC3 1192 aaKnown RBP9.91□□□□□ -0.82
ARF4P3-201ENST00000397387 ZNF692Q9BU19 519 aaPredicted RBP9.89□□□□□ -0.83
ARF4P3-201ENST00000397387 POTEIP0CG38 1075 aa9.88□□□□□ -0.83
ARF4P3-201ENST00000397387 PRR29P0C7W0 189 aa9.86□□□□□ -0.83
ARF4P3-201ENST00000397387 DCBLD2Q96PD2 775 aa9.84□□□□□ -0.83
ARF4P3-201ENST00000397387 CD44P16070 742 aaKnown RBP9.83□□□□□ -0.84
ARF4P3-201ENST00000397387 CLCN6P51797 869 aa9.76□□□□□ -0.85
ARF4P3-201ENST00000397387 SSUH2Q9Y2M2 353 aa9.76□□□□□ -0.85
ARF4P3-201ENST00000397387 POTEMA6NI47 508 aa9.71□□□□□ -0.86
ARF4P3-201ENST00000397387 SLC24A1O60721 1099 aa9.71□□□□□ -0.86
ARF4P3-201ENST00000397387 FARP1Q9Y4F1 1045 aaPredicted RBP9.71□□□□□ -0.86
ARF4P3-201ENST00000397387 PABPN1Q86U42 306 aaKnown RBP eCLIP9.7□□□□□ -0.86
ARF4P3-201ENST00000397387 MKRN4PQ13434 485 aaPredicted RBP9.69□□□□□ -0.86
ARF4P3-201ENST00000397387 SPDYE4A6NLX3 237 aa9.67□□□□□ -0.86
ARF4P3-201ENST00000397387 FBXO3Q9UK99 471 aa9.67□□□□□ -0.86
ARF4P3-201ENST00000397387 POTEGQ6S5H5 508 aa9.66□□□□□ -0.86
ARF4P3-201ENST00000397387 OTUD5Q96G74 571 aa9.66□□□□□ -0.86
ARF4P3-201ENST00000397387 ZRANB1Q9UGI0 708 aa9.62□□□□□ -0.87
ARF4P3-201ENST00000397387 ZNF579Q8NAF0 562 aaKnown RBP9.57□□□□□ -0.88
ARF4P3-201ENST00000397387 POTEB2H3BUK9 544 aa9.56□□□□□ -0.88
ARF4P3-201ENST00000397387 PCDH10Q9P2E7 1040 aa9.56□□□□□ -0.88
ARF4P3-201ENST00000397387 GALR2O43603 387 aaPredicted RBP9.54□□□□□ -0.88
ARF4P3-201ENST00000397387 PROM2Q8N271 834 aa9.46□□□□□ -0.9
ARF4P3-201ENST00000397387 PAK3O75914 559 aaPredicted RBP9.45□□□□□ -0.9
ARF4P3-201ENST00000397387 VASPP50552 380 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms