RNA–Protein interactions for RNA: ENST00000396821.7

DDX17-202, Transcript of DEAD-box helicase 17, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX17, Length 4,791 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX17-202ENST00000396821 NISCHQ9Y2I1 1504 aa26.44■■□□□ 1.82
DDX17-202ENST00000396821 DCAF8L2P0C7V8 631 aa25.49■■□□□ 1.67
DDX17-202ENST00000396821 SUPT5HO00267 1087 aaKnown RBP24.61■■□□□ 1.53
DDX17-202ENST00000396821 SHROOM4Q9ULL8 1493 aa24.41■■□□□ 1.5
DDX17-202ENST00000396821 EHMT2Q96KQ7 1210 aa23.22■■□□□ 1.31
DDX17-202ENST00000396821 FAM9AQ8IZU1 332 aaPredicted RBP23.03■■□□□ 1.28
DDX17-202ENST00000396821 TRIM41Q8WV44 630 aa22.94■■□□□ 1.26
DDX17-202ENST00000396821 PCGF6Q9BYE7 350 aa22.93■■□□□ 1.26
DDX17-202ENST00000396821 APLP2Q06481 763 aa22.92■■□□□ 1.26
DDX17-202ENST00000396821 ZEB1P37275 1124 aaPredicted RBP22.63■■□□□ 1.21
DDX17-202ENST00000396821 CHIC1Q5VXU3 224 aa22.53■■□□□ 1.2
DDX17-202ENST00000396821 TTBK1Q5TCY1 1321 aaPredicted RBP22.47■■□□□ 1.19
DDX17-202ENST00000396821 UBTFP17480 764 aaKnown RBP22.41■■□□□ 1.18
DDX17-202ENST00000396821 CCER1Q8TC90 406 aaPredicted RBP22.34■■□□□ 1.17
DDX17-202ENST00000396821 PELP1Q8IZL8 1130 aaKnown RBP22.33■■□□□ 1.16
DDX17-202ENST00000396821 TRIM26Q12899 539 aaPredicted RBP22.29■■□□□ 1.16
DDX17-202ENST00000396821 RANGAP1P46060 587 aaPredicted RBP22.27■■□□□ 1.16
DDX17-202ENST00000396821 LOC105371045A0A1W2PR82 267 aa22.17■■□□□ 1.14
DDX17-202ENST00000396821 HRCP23327 699 aa22.14■■□□□ 1.13
DDX17-202ENST00000396821 CENPBP07199 599 aaPredicted RBP22.1■■□□□ 1.13
DDX17-202ENST00000396821 ABCC9O60706 1549 aa22.08■■□□□ 1.12
DDX17-202ENST00000396821 ZCCHC6Q5VYS8 1495 aaKnown RBP22.03■■□□□ 1.12
DDX17-202ENST00000396821 ATP1B4Q9UN42 357 aaPredicted RBP21.99■■□□□ 1.11
DDX17-202ENST00000396821 PPARGC1BQ86YN6 1023 aaKnown RBP21.99■■□□□ 1.11
DDX17-202ENST00000396821 CCDC180Q9P1Z9 1646 aa21.91■■□□□ 1.1
DDX17-202ENST00000396821 PABPN1Q86U42 306 aaKnown RBP eCLIP21.7■■□□□ 1.06
DDX17-202ENST00000396821 HNRNPUL2Q1KMD3 747 aaKnown RBP21.56■■□□□ 1.04
DDX17-202ENST00000396821 SCRIBQ14160 1630 aa21.51■■□□□ 1.03
DDX17-202ENST00000396821 YTHDC1Q96MU7 727 aaKnown RBP21.51■■□□□ 1.03
DDX17-202ENST00000396821 ITGAEP38570 1179 aa21.47■■□□□ 1.03
DDX17-202ENST00000396821 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.43■■□□□ 1.02
DDX17-202ENST00000396821 NEFLP07196 543 aa21.4■■□□□ 1.02
DDX17-202ENST00000396821 CSRNP3Q8WYN3 585 aa21.33■■□□□ 1.01
DDX17-202ENST00000396821 DCAF1Q9Y4B6 1507 aa21.29■■□□□ 1
DDX17-202ENST00000396821 DIEXFQ68CQ4 756 aaKnown RBP21.24■□□□□ 0.99
DDX17-202ENST00000396821 ERICH6Q7L0X2 663 aa21.19■□□□□ 0.98
DDX17-202ENST00000396821 RSF1Q96T23 1441 aaPredicted RBP21.11■□□□□ 0.97
DDX17-202ENST00000396821 FAM50AQ14320 339 aaKnown RBP21.11■□□□□ 0.97
DDX17-202ENST00000396821 RB1CC1Q8TDY2 1594 aa21.07■□□□□ 0.96
DDX17-202ENST00000396821 NACADO15069 1562 aa21.07■□□□□ 0.96
DDX17-202ENST00000396821 MYT1Q01538 1121 aa20.98■□□□□ 0.95
DDX17-202ENST00000396821 MYO15BQ96JP2 1530 aa20.94■□□□□ 0.94
DDX17-202ENST00000396821 ZNF316A6NFI3 1004 aaPredicted RBP20.94■□□□□ 0.94
DDX17-202ENST00000396821 POLR3GLQ9BT43 218 aa20.91■□□□□ 0.94
DDX17-202ENST00000396821 MYT1LQ9UL68 1186 aa20.88■□□□□ 0.93
DDX17-202ENST00000396821 TRIM52Q96A61 297 aa20.86■□□□□ 0.93
DDX17-202ENST00000396821 NEUROD1Q13562 356 aa20.85■□□□□ 0.93
DDX17-202ENST00000396821 EEA1Q15075 1411 aa20.82■□□□□ 0.92
DDX17-202ENST00000396821 P3H3Q8IVL6 736 aa20.77■□□□□ 0.92
DDX17-202ENST00000396821 BAZ1AQ9NRL2 1556 aaPredicted RBP20.71■□□□□ 0.91
DDX17-202ENST00000396821 ANP32CO43423 234 aa20.67■□□□□ 0.9
DDX17-202ENST00000396821 GTF3C3Q9Y5Q9 886 aa20.66■□□□□ 0.9
DDX17-202ENST00000396821 CLIP1P30622 1438 aa20.66■□□□□ 0.9
DDX17-202ENST00000396821 GOLGA3Q08378 1498 aa20.64■□□□□ 0.9
DDX17-202ENST00000396821 CNGB1Q14028 1251 aaPredicted RBP20.64■□□□□ 0.89
DDX17-202ENST00000396821 WRNQ14191 1432 aaPredicted RBP eCLIP20.63■□□□□ 0.89
DDX17-202ENST00000396821 CECR2Q9BXF3 1484 aa20.63■□□□□ 0.89
DDX17-202ENST00000396821 FBLN2P98095 1184 aa20.63■□□□□ 0.89
DDX17-202ENST00000396821 ACIN1Q9UKV3 1341 aaKnown RBP20.61■□□□□ 0.89
DDX17-202ENST00000396821 CEP162Q5TB80 1403 aa20.6■□□□□ 0.89
DDX17-202ENST00000396821 BAZ1BQ9UIG0 1483 aaKnown RBP20.58■□□□□ 0.89
DDX17-202ENST00000396821 CDK11AQ9UQ88 783 aaPredicted RBP20.58■□□□□ 0.89
DDX17-202ENST00000396821 TNIKQ9UKE5 1360 aa20.57■□□□□ 0.88
DDX17-202ENST00000396821 CEP164Q9UPV0 1460 aa20.48■□□□□ 0.87
DDX17-202ENST00000396821 ARID3CA6NKF2 412 aa20.47■□□□□ 0.87
DDX17-202ENST00000396821 ZNF326Q5BKZ1 582 aaKnown RBP20.47■□□□□ 0.87
DDX17-202ENST00000396821 DAXXQ9UER7 740 aaPredicted RBP20.45■□□□□ 0.86
DDX17-202ENST00000396821 MROH2BQ7Z745 1585 aa20.44■□□□□ 0.86
DDX17-202ENST00000396821 TONSLQ96HA7 1378 aa20.43■□□□□ 0.86
DDX17-202ENST00000396821 KIF27Q86VH2 1401 aa20.41■□□□□ 0.86
DDX17-202ENST00000396821 ZNF777Q9ULD5 760 aaPredicted RBP20.37■□□□□ 0.85
DDX17-202ENST00000396821 CLSPNQ9HAW4 1339 aa20.37■□□□□ 0.85
DDX17-202ENST00000396821 SLC4A1APQ9BWU0 796 aaKnown RBP20.36■□□□□ 0.85
DDX17-202ENST00000396821 MTUS2Q5JR59 1369 aa20.35■□□□□ 0.85
DDX17-202ENST00000396821 BCANQ96GW7 911 aa20.32■□□□□ 0.84
DDX17-202ENST00000396821 CCDC88BA6NC98 1476 aa20.3■□□□□ 0.84
DDX17-202ENST00000396821 SOGA1O94964 1423 aa20.25■□□□□ 0.83
DDX17-202ENST00000396821 DDX10Q13206 875 aaKnown RBP20.22■□□□□ 0.83
DDX17-202ENST00000396821 CHIC2Q9UKJ5 165 aa20.2■□□□□ 0.82
DDX17-202ENST00000396821 TOP2AP11388 1531 aaKnown RBP20.19■□□□□ 0.82
DDX17-202ENST00000396821 SMARCA2P51531 1590 aa20.17■□□□□ 0.82
DDX17-202ENST00000396821 MIER1Q8N108 512 aa20.13■□□□□ 0.81
DDX17-202ENST00000396821 CHMP7Q8WUX9 453 aaPredicted RBP20.13■□□□□ 0.81
DDX17-202ENST00000396821 WIZO95785 1651 aa20.13■□□□□ 0.81
DDX17-202ENST00000396821 ABCC8Q09428 1581 aa20.12■□□□□ 0.81
DDX17-202ENST00000396821 RTL5Q5HYW3 569 aaPredicted RBP20.11■□□□□ 0.81
DDX17-202ENST00000396821 TSPY4P0CV99 314 aa20.09■□□□□ 0.81
DDX17-202ENST00000396821 TSPY10P0CW01 314 aa20.09■□□□□ 0.81
DDX17-202ENST00000396821 VPS8Q8N3P4 1428 aa20.08■□□□□ 0.8
DDX17-202ENST00000396821 FHAD1B1AJZ9 1412 aa20.06■□□□□ 0.8
DDX17-202ENST00000396821 CARMIL1Q5VZK9 1371 aa20.05■□□□□ 0.8
DDX17-202ENST00000396821 HNRNPUQ00839 825 aaKnown RBP eCLIP20.05■□□□□ 0.8
DDX17-202ENST00000396821 CUX2O14529 1486 aa20.04■□□□□ 0.8
DDX17-202ENST00000396821 FKBP8Q14318 412 aa20.03■□□□□ 0.8
DDX17-202ENST00000396821 RRP7BPQ9NSQ0 103 aa20.01■□□□□ 0.79
DDX17-202ENST00000396821 CCNB3Q8WWL7 1395 aa20.01■□□□□ 0.79
DDX17-202ENST00000396821 SCAF1Q9H7N4 1312 aaKnown RBP20■□□□□ 0.79
DDX17-202ENST00000396821 EIF4G2P78344 907 aaKnown RBP eCLIP19.98■□□□□ 0.79
DDX17-202ENST00000396821 SMARCA4P51532 1647 aa19.96■□□□□ 0.79
DDX17-202ENST00000396821 FAM9BQ8IZU0 186 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms