RNA–Protein interactions for RNA: ENST00000396175.5

TRAK1-203, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRAK1, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-203ENST00000396175 DCAF8L2P0C7V8 631 aa24.21■■□□□ 1.47
TRAK1-203ENST00000396175 SUPT5HO00267 1087 aaKnown RBP23.72■■□□□ 1.39
TRAK1-203ENST00000396175 NISCHQ9Y2I1 1504 aa23.6■■□□□ 1.37
TRAK1-203ENST00000396175 PELP1Q8IZL8 1130 aaKnown RBP23.16■■□□□ 1.3
TRAK1-203ENST00000396175 SHROOM4Q9ULL8 1493 aa23.11■■□□□ 1.29
TRAK1-203ENST00000396175 PCGF6Q9BYE7 350 aa22.77■■□□□ 1.24
TRAK1-203ENST00000396175 EHMT2Q96KQ7 1210 aa22.71■■□□□ 1.23
TRAK1-203ENST00000396175 ZEB1P37275 1124 aaPredicted RBP22.55■■□□□ 1.2
TRAK1-203ENST00000396175 CENPBP07199 599 aaPredicted RBP22.53■■□□□ 1.2
TRAK1-203ENST00000396175 APLP2Q06481 763 aa22.45■■□□□ 1.18
TRAK1-203ENST00000396175 MYT1Q01538 1121 aa22.41■■□□□ 1.18
TRAK1-203ENST00000396175 FAM9AQ8IZU1 332 aaPredicted RBP22.31■■□□□ 1.16
TRAK1-203ENST00000396175 CCER1Q8TC90 406 aaPredicted RBP22.16■■□□□ 1.14
TRAK1-203ENST00000396175 ERICH6Q7L0X2 663 aa22.1■■□□□ 1.13
TRAK1-203ENST00000396175 TTBK1Q5TCY1 1321 aaPredicted RBP22.08■■□□□ 1.13
TRAK1-203ENST00000396175 HRCP23327 699 aa22.01■■□□□ 1.11
TRAK1-203ENST00000396175 TRIM41Q8WV44 630 aa21.99■■□□□ 1.11
TRAK1-203ENST00000396175 TRIM26Q12899 539 aaPredicted RBP21.83■■□□□ 1.09
TRAK1-203ENST00000396175 NEFLP07196 543 aa21.78■■□□□ 1.08
TRAK1-203ENST00000396175 YTHDC1Q96MU7 727 aaKnown RBP21.78■■□□□ 1.08
TRAK1-203ENST00000396175 UBTFP17480 764 aaKnown RBP21.6■■□□□ 1.05
TRAK1-203ENST00000396175 RANGAP1P46060 587 aaPredicted RBP21.57■■□□□ 1.04
TRAK1-203ENST00000396175 PPARGC1BQ86YN6 1023 aaKnown RBP21.44■■□□□ 1.02
TRAK1-203ENST00000396175 CHIC1Q5VXU3 224 aa21.43■■□□□ 1.02
TRAK1-203ENST00000396175 LOC105371045A0A1W2PR82 267 aa21.32■■□□□ 1
TRAK1-203ENST00000396175 ATP1B4Q9UN42 357 aaPredicted RBP21.32■■□□□ 1
TRAK1-203ENST00000396175 DIEXFQ68CQ4 756 aaKnown RBP21.16■□□□□ 0.98
TRAK1-203ENST00000396175 HNRNPUL2Q1KMD3 747 aaKnown RBP21.02■□□□□ 0.96
TRAK1-203ENST00000396175 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.02■□□□□ 0.95
TRAK1-203ENST00000396175 DAXXQ9UER7 740 aaPredicted RBP21.01■□□□□ 0.95
TRAK1-203ENST00000396175 GTF3C3Q9Y5Q9 886 aa20.95■□□□□ 0.94
TRAK1-203ENST00000396175 ITGAEP38570 1179 aa20.92■□□□□ 0.94
TRAK1-203ENST00000396175 RTL5Q5HYW3 569 aaPredicted RBP20.83■□□□□ 0.92
TRAK1-203ENST00000396175 ACIN1Q9UKV3 1341 aaKnown RBP20.74■□□□□ 0.91
TRAK1-203ENST00000396175 POLR3GLQ9BT43 218 aa20.72■□□□□ 0.91
TRAK1-203ENST00000396175 ZNF316A6NFI3 1004 aaPredicted RBP20.63■□□□□ 0.89
TRAK1-203ENST00000396175 BCANQ96GW7 911 aa20.57■□□□□ 0.88
TRAK1-203ENST00000396175 CNGB1Q14028 1251 aaPredicted RBP20.53■□□□□ 0.88
TRAK1-203ENST00000396175 CDK11AQ9UQ88 783 aaPredicted RBP20.52■□□□□ 0.88
TRAK1-203ENST00000396175 ANP32CO43423 234 aa20.46■□□□□ 0.87
TRAK1-203ENST00000396175 CLSPNQ9HAW4 1339 aa20.44■□□□□ 0.86
TRAK1-203ENST00000396175 FAM50AQ14320 339 aaKnown RBP20.38■□□□□ 0.85
TRAK1-203ENST00000396175 NEUROD1Q13562 356 aa20.37■□□□□ 0.85
TRAK1-203ENST00000396175 DCAF1Q9Y4B6 1507 aa20.31■□□□□ 0.84
TRAK1-203ENST00000396175 TRIM52Q96A61 297 aa20.24■□□□□ 0.83
TRAK1-203ENST00000396175 MYT1LQ9UL68 1186 aa20.2■□□□□ 0.82
TRAK1-203ENST00000396175 SCAF1Q9H7N4 1312 aaKnown RBP20.18■□□□□ 0.82
TRAK1-203ENST00000396175 ANP32AP39687 249 aaKnown RBP20.17■□□□□ 0.82
TRAK1-203ENST00000396175 FKBP8Q14318 412 aa20.11■□□□□ 0.81
TRAK1-203ENST00000396175 CSRNP3Q8WYN3 585 aa20.09■□□□□ 0.81
TRAK1-203ENST00000396175 SLC4A1APQ9BWU0 796 aaKnown RBP20.09■□□□□ 0.81
TRAK1-203ENST00000396175 ZNF326Q5BKZ1 582 aaKnown RBP19.99■□□□□ 0.79
TRAK1-203ENST00000396175 NPM2Q86SE8 214 aaKnown RBP19.9■□□□□ 0.78
TRAK1-203ENST00000396175 HNRNPUQ00839 825 aaKnown RBP eCLIP19.88■□□□□ 0.77
TRAK1-203ENST00000396175 EIF5BO60841 1220 aaKnown RBP19.88■□□□□ 0.77
TRAK1-203ENST00000396175 ZBTB47Q9UFB7 747 aaPredicted RBP19.87■□□□□ 0.77
TRAK1-203ENST00000396175 CANXP27824 592 aaKnown RBP19.86■□□□□ 0.77
TRAK1-203ENST00000396175 DDX10Q13206 875 aaKnown RBP19.85■□□□□ 0.77
TRAK1-203ENST00000396175 MIER1Q8N108 512 aa19.85■□□□□ 0.77
TRAK1-203ENST00000396175 TONSLQ96HA7 1378 aa19.81■□□□□ 0.76
TRAK1-203ENST00000396175 PABPN1Q86U42 306 aaKnown RBP eCLIP19.73■□□□□ 0.75
TRAK1-203ENST00000396175 GLIPR1L2Q4G1C9 344 aa19.72■□□□□ 0.75
TRAK1-203ENST00000396175 CCDC136Q96JN2 1154 aa19.71■□□□□ 0.75
TRAK1-203ENST00000396175 FAM9BQ8IZU0 186 aa19.7■□□□□ 0.74
TRAK1-203ENST00000396175 NBR1Q14596 966 aa19.7■□□□□ 0.74
TRAK1-203ENST00000396175 ANP32EQ9BTT0 268 aa19.69■□□□□ 0.74
TRAK1-203ENST00000396175 P3H3Q8IVL6 736 aa19.68■□□□□ 0.74
TRAK1-203ENST00000396175 ANP32BQ92688 251 aaKnown RBP19.68■□□□□ 0.74
TRAK1-203ENST00000396175 ABCC9O60706 1549 aa19.67■□□□□ 0.74
TRAK1-203ENST00000396175 UPF2Q9HAU5 1272 aaKnown RBP19.64■□□□□ 0.73
TRAK1-203ENST00000396175 MYO15BQ96JP2 1530 aa19.64■□□□□ 0.73
TRAK1-203ENST00000396175 ZCCHC6Q5VYS8 1495 aaKnown RBP19.62■□□□□ 0.73
TRAK1-203ENST00000396175 NEFMP07197 916 aa19.61■□□□□ 0.73
TRAK1-203ENST00000396175 CCDC180Q9P1Z9 1646 aa19.58■□□□□ 0.72
TRAK1-203ENST00000396175 MRS2Q9HD23 443 aa19.56■□□□□ 0.72
TRAK1-203ENST00000396175 TMC1Q8TDI8 760 aa19.55■□□□□ 0.72
TRAK1-203ENST00000396175 HSP90AA1P07900 732 aaKnown RBP19.55■□□□□ 0.72
TRAK1-203ENST00000396175 BCL11AQ9H165 835 aa19.53■□□□□ 0.72
TRAK1-203ENST00000396175 IRX6P78412 446 aaPredicted RBP19.51■□□□□ 0.71
TRAK1-203ENST00000396175 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.5■□□□□ 0.71
TRAK1-203ENST00000396175 SALL2Q9Y467 1007 aaPredicted RBP19.46■□□□□ 0.71
TRAK1-203ENST00000396175 ARID3CA6NKF2 412 aa19.45■□□□□ 0.7
TRAK1-203ENST00000396175 ZNF777Q9ULD5 760 aaPredicted RBP19.45■□□□□ 0.7
TRAK1-203ENST00000396175 CLIP1P30622 1438 aa19.43■□□□□ 0.7
TRAK1-203ENST00000396175 DDRGK1Q96HY6 314 aa19.4■□□□□ 0.7
TRAK1-203ENST00000396175 EIF4G2P78344 907 aaKnown RBP eCLIP19.38■□□□□ 0.69
TRAK1-203ENST00000396175 HIRIP3Q9BW71 556 aaPredicted RBP19.37■□□□□ 0.69
TRAK1-203ENST00000396175 SUPT16HQ9Y5B9 1047 aaKnown RBP19.37■□□□□ 0.69
TRAK1-203ENST00000396175 FBLN2P98095 1184 aa19.36■□□□□ 0.69
TRAK1-203ENST00000396175 CEP162Q5TB80 1403 aa19.35■□□□□ 0.69
TRAK1-203ENST00000396175 EEA1Q15075 1411 aa19.34■□□□□ 0.69
TRAK1-203ENST00000396175 SCRIBQ14160 1630 aa19.32■□□□□ 0.68
TRAK1-203ENST00000396175 WDR43Q15061 677 aaKnown RBP eCLIP19.32■□□□□ 0.68
TRAK1-203ENST00000396175 SLC24A1O60721 1099 aa19.32■□□□□ 0.68
TRAK1-203ENST00000396175 ARXQ96QS3 562 aa19.32■□□□□ 0.68
TRAK1-203ENST00000396175 CHIC2Q9UKJ5 165 aa19.31■□□□□ 0.68
TRAK1-203ENST00000396175 PPM1GO15355 546 aaPredicted RBP19.3■□□□□ 0.68
TRAK1-203ENST00000396175 BECN1Q14457 450 aa19.28■□□□□ 0.68
TRAK1-203ENST00000396175 PPP4R2Q9NY27 417 aa19.28■□□□□ 0.68
TRAK1-203ENST00000396175 GOLGA3Q08378 1498 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 1214.9 ms