RNA–Protein interactions for RNA: ENST00000395874.2

ZNF248-205, Transcript of zinc finger protein 248, humanhuman

TSL 3

Gene ZNF248, Length 436 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-205ENST00000395874 AEBP2Q6ZN18 517 aaPredicted RBP27.54■■■□□ 2
ZNF248-205ENST00000395874 CHIC1Q5VXU3 224 aa26.78■■□□□ 1.88
ZNF248-205ENST00000395874 SENP3Q9H4L4 574 aaPredicted RBP23.7■■□□□ 1.38
ZNF248-205ENST00000395874 PHF23Q9BUL5 403 aaPredicted RBP23.35■■□□□ 1.33
ZNF248-205ENST00000395874 FOXD1Q16676 465 aa21.84■■□□□ 1.09
ZNF248-205ENST00000395874 PLPPR3Q6T4P5 718 aa21.72■■□□□ 1.07
ZNF248-205ENST00000395874 ADRA2BP18089 450 aa20.7■□□□□ 0.9
ZNF248-205ENST00000395874 PPP6R1Q9UPN7 881 aa20.67■□□□□ 0.9
ZNF248-205ENST00000395874 PIAS4Q8N2W9 510 aaPredicted RBP20.64■□□□□ 0.89
ZNF248-205ENST00000395874 MSH5O43196 834 aa20.49■□□□□ 0.87
ZNF248-205ENST00000395874 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
ZNF248-205ENST00000395874 PPP4R3CPQ6ZMV5 832 aa19.01■□□□□ 0.63
ZNF248-205ENST00000395874 POTEDQ86YR6 584 aa18.98■□□□□ 0.63
ZNF248-205ENST00000395874 MAPK8IP2Q13387 824 aaPredicted RBP18.8■□□□□ 0.6
ZNF248-205ENST00000395874 DMRT2Q9Y5R5 561 aa18.8■□□□□ 0.6
ZNF248-205ENST00000395874 CNKSR2Q8WXI2 1034 aa18.62■□□□□ 0.57
ZNF248-205ENST00000395874 NCBP3Q53F19 620 aaKnown RBP18.61■□□□□ 0.57
ZNF248-205ENST00000395874 RNF216Q9NWF9 866 aaPredicted RBP18.33■□□□□ 0.52
ZNF248-205ENST00000395874 HOXD11P31277 338 aaPredicted RBP18.28■□□□□ 0.52
ZNF248-205ENST00000395874 KCNA4P22459 653 aa18.15■□□□□ 0.5
ZNF248-205ENST00000395874 NPM3O75607 178 aaKnown RBP18.11■□□□□ 0.49
ZNF248-205ENST00000395874 DCAF8L1A6NGE4 600 aa18.03■□□□□ 0.48
ZNF248-205ENST00000395874 DNAJC5BQ9UF47 199 aa17.75■□□□□ 0.43
ZNF248-205ENST00000395874 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.49■□□□□ 0.39
ZNF248-205ENST00000395874 RNF39Q9H2S5 420 aa17.39■□□□□ 0.37
ZNF248-205ENST00000395874 SLC4A1APQ9BWU0 796 aaKnown RBP17.35■□□□□ 0.37
ZNF248-205ENST00000395874 C1QBPQ07021 282 aaKnown RBP17.28■□□□□ 0.36
ZNF248-205ENST00000395874 CACNB1Q02641 598 aaPredicted RBP17.21■□□□□ 0.35
ZNF248-205ENST00000395874 SLC4A2P04920 1241 aa17.11■□□□□ 0.33
ZNF248-205ENST00000395874 U3KPZ7 1027 aaPredicted RBP17.05■□□□□ 0.32
ZNF248-205ENST00000395874 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.02■□□□□ 0.32
ZNF248-205ENST00000395874 HNRNPUL2Q1KMD3 747 aaKnown RBP17.02■□□□□ 0.32
ZNF248-205ENST00000395874 APLP2Q06481 763 aa16.98■□□□□ 0.31
ZNF248-205ENST00000395874 FOXD4L1Q9NU39 408 aa16.93■□□□□ 0.3
ZNF248-205ENST00000395874 MYCNP04198 464 aaPredicted RBP16.89■□□□□ 0.29
ZNF248-205ENST00000395874 SAMD1Q6SPF0 538 aaPredicted RBP16.88■□□□□ 0.29
ZNF248-205ENST00000395874 CAPN15O75808 1086 aa16.71■□□□□ 0.27
ZNF248-205ENST00000395874 ZNF219Q9P2Y4 722 aaPredicted RBP16.65■□□□□ 0.26
ZNF248-205ENST00000395874 SPINK5Q9NQ38 1064 aaPredicted RBP16.61■□□□□ 0.25
ZNF248-205ENST00000395874 ZBTB22O15209 634 aa16.6■□□□□ 0.25
ZNF248-205ENST00000395874 TRHP20396 242 aaPredicted RBP16.52■□□□□ 0.24
ZNF248-205ENST00000395874 ATXN8OSP0DMR3 200 aa16.43■□□□□ 0.22
ZNF248-205ENST00000395874 EHMT2Q96KQ7 1210 aa16.43■□□□□ 0.22
ZNF248-205ENST00000395874 DSG3P32926 999 aa16.42■□□□□ 0.22
ZNF248-205ENST00000395874 CSRNP3Q8WYN3 585 aa16.32■□□□□ 0.2
ZNF248-205ENST00000395874 ABCB7O75027 752 aa16.27■□□□□ 0.2
ZNF248-205ENST00000395874 ATF5Q9Y2D1 282 aaPredicted RBP16.19■□□□□ 0.18
ZNF248-205ENST00000395874 POLA2Q14181 598 aa16.16■□□□□ 0.18
ZNF248-205ENST00000395874 ZBTB12Q9Y330 459 aaPredicted RBP16.12■□□□□ 0.17
ZNF248-205ENST00000395874 RBM42Q9BTD8 480 aaKnown RBP15.89■□□□□ 0.13
ZNF248-205ENST00000395874 FBLN2P98095 1184 aa15.87■□□□□ 0.13
ZNF248-205ENST00000395874 OSCARQ8IYS5 282 aa15.63■□□□□ 0.09
ZNF248-205ENST00000395874 SPDYE2BA6NHP3 402 aa15.55■□□□□ 0.08
ZNF248-205ENST00000395874 SPDYE6P0CI01 402 aa15.55■□□□□ 0.08
ZNF248-205ENST00000395874 SPDYE2Q495Y8 402 aa15.55■□□□□ 0.08
ZNF248-205ENST00000395874 MKRN4PQ13434 485 aaPredicted RBP15.52■□□□□ 0.08
ZNF248-205ENST00000395874 AKT1S1Q96B36 256 aa15.52■□□□□ 0.08
ZNF248-205ENST00000395874 ZNF692Q9BU19 519 aaPredicted RBP15.38■□□□□ 0.05
ZNF248-205ENST00000395874 SSUH2Q9Y2M2 353 aa15.3■□□□□ 0.04
ZNF248-205ENST00000395874 REM2Q8IYK8 340 aaPredicted RBP15.28■□□□□ 0.04
ZNF248-205ENST00000395874 SPDYE4A6NLX3 237 aa15.19■□□□□ 0.02
ZNF248-205ENST00000395874 CHRDL2Q6WN34 429 aa15.19■□□□□ 0.02
ZNF248-205ENST00000395874 SPDYE1Q8NFV5 336 aaPredicted RBP15.18■□□□□ 0.02
ZNF248-205ENST00000395874 PABPN1Q86U42 306 aaKnown RBP eCLIP15.14■□□□□ 0.01
ZNF248-205ENST00000395874 PITPNM1O00562 1244 aa15.1■□□□□ 0.01
ZNF248-205ENST00000395874 CLEC11AQ9Y240 323 aa15.04■□□□□ -0
ZNF248-205ENST00000395874 POTEHQ6S545 545 aa15.03■□□□□ -0
ZNF248-205ENST00000395874 STAG3Q9UJ98 1225 aa14.99□□□□□ -0.01
ZNF248-205ENST00000395874 PRR29P0C7W0 189 aa14.9□□□□□ -0.02
ZNF248-205ENST00000395874 FXR2P51116 673 aaKnown RBP eCLIP14.89□□□□□ -0.03
ZNF248-205ENST00000395874 FKBP8Q14318 412 aa14.88□□□□□ -0.03
ZNF248-205ENST00000395874 PIP4P2Q8N4L2 257 aa14.87□□□□□ -0.03
ZNF248-205ENST00000395874 PROM2Q8N271 834 aa14.83□□□□□ -0.04
ZNF248-205ENST00000395874 PRKAR2AP13861 404 aaKnown RBP14.75□□□□□ -0.05
ZNF248-205ENST00000395874 PLEKHG5O94827 1062 aa14.62□□□□□ -0.07
ZNF248-205ENST00000395874 FBXO3Q9UK99 471 aa14.62□□□□□ -0.07
ZNF248-205ENST00000395874 CHADLQ6NUI6 762 aa14.58□□□□□ -0.08
ZNF248-205ENST00000395874 HAX1O00165 279 aa14.55□□□□□ -0.08
ZNF248-205ENST00000395874 CREBZFQ9NS37 354 aa14.52□□□□□ -0.09
ZNF248-205ENST00000395874 FARP1Q9Y4F1 1045 aaPredicted RBP14.52□□□□□ -0.09
ZNF248-205ENST00000395874 NPM1P06748 294 aaKnown RBP eCLIP14.48□□□□□ -0.09
ZNF248-205ENST00000395874 PLCD3Q8N3E9 789 aa14.45□□□□□ -0.1
ZNF248-205ENST00000395874 MIER1Q8N108 512 aa14.44□□□□□ -0.1
ZNF248-205ENST00000395874 ZBTB47Q9UFB7 747 aaPredicted RBP14.44□□□□□ -0.1
ZNF248-205ENST00000395874 C19orf67A6NJJ6 358 aa14.39□□□□□ -0.11
ZNF248-205ENST00000395874 PAK3O75914 559 aaPredicted RBP14.37□□□□□ -0.11
ZNF248-205ENST00000395874 SP7Q8TDD2 431 aaPredicted RBP14.35□□□□□ -0.11
ZNF248-205ENST00000395874 CD44P16070 742 aaKnown RBP14.34□□□□□ -0.11
ZNF248-205ENST00000395874 VASPP50552 380 aaPredicted RBP14.29□□□□□ -0.12
ZNF248-205ENST00000395874 NISCHQ9Y2I1 1504 aa14.29□□□□□ -0.12
ZNF248-205ENST00000395874 MNX1P50219 401 aaPredicted RBP14.28□□□□□ -0.12
ZNF248-205ENST00000395874 CLCN6P51797 869 aa14.26□□□□□ -0.13
ZNF248-205ENST00000395874 ZRANB1Q9UGI0 708 aa14.2□□□□□ -0.14
ZNF248-205ENST00000395874 EVX2Q03828 476 aa14.16□□□□□ -0.14
ZNF248-205ENST00000395874 KLHL34Q8N239 644 aa14.16□□□□□ -0.14
ZNF248-205ENST00000395874 ZNF579Q8NAF0 562 aaKnown RBP14.15□□□□□ -0.14
ZNF248-205ENST00000395874 FAM212AQ96EL1 285 aa14.1□□□□□ -0.15
ZNF248-205ENST00000395874 TSPYL2Q9H2G4 693 aaPredicted RBP14.07□□□□□ -0.16
ZNF248-205ENST00000395874 GABBR2O75899 941 aa14.03□□□□□ -0.16
ZNF248-205ENST00000395874 NUBP1P53384 320 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms